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MS009156 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009156
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCore-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Genome locationscaffold220:305739..305981
RNA-Seq ExpressionMS009156
SyntenyMS009156
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0016757 - transferase activity, transferring glycosyl groups (molecular function)
InterPro domainsIPR044174 - Glycosyltransferase BC10-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602243.1 Glycosyltransferase BC10, partial [Cucurbita argyrosperma subsp. sororia]9.3e-2365.26Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FFRGHGL +N    ADPSVE N PGGVF+GRFIPA +T   +           A AVIDDP NLYFALVSQR IPI SFDF+YNFLF+NS+TSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

KAG7032923.1 hypothetical protein SDJN02_06974, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-2365.26Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FFRGHGL +N    ADPSVE N PGGVF+GRFIPA +T   +           A AVIDDP NLYFALVSQR IPI SFDF+YNFLF+NS+TSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

XP_022961358.1 uncharacterized protein LOC111461937 [Cucurbita moschata]9.3e-2365.26Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FFRGHGL +N    ADPSVE N PGGVF+GRFIPA +T   +           A AVIDDP NLYFALVSQR IPI SFDF+YNFLF+NS+TSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

XP_022990393.1 uncharacterized protein LOC111487264 [Cucurbita maxima]9.3e-2365.26Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FFRGHGL +N    ADPSVE N PGGVF+GRFIPA +T   +           A AVIDDP NLYFALVSQR IPI SFDF+YNFLF+NS+TSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

XP_023523379.1 uncharacterized protein LOC111787593 [Cucurbita pepo subsp. pepo]9.3e-2365.26Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FFRGHGL +N    ADPSVE N PGGVF+GRFIPA +T   +           A AVIDDP NLYFALVSQR IPI SFDF+YNFLF+NS+TSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

TrEMBL top hitse value%identityAlignment
A0A0A0K8K2 Uncharacterized protein3.6e-2060Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FF GH L +N    ADP+V+   PGGVF+GRF+PA KT+  +           ARAVIDDP NLYFALVSQ  IPI SFDF+Y+FLF+NSITSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

A0A1S3C397 uncharacterized protein LOC1034965244.7e-2060Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FF GH L +N    ADP+V+   PGGVF+GRF+PA KT   +           ARAVIDDP NLYFALVSQ  IPI SFDF+Y+FLF+NSITSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

A0A6J1BWZ7 uncharacterized protein LOC1110061011.6e-2069.41Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNF
        FFRGHGLLFN    ADPSVE N PGGVFEGRFI AGKT   +           ARAVIDDP NLYFALVSQR IPIQSFDFI+N+
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNF

A0A6J1HBZ3 uncharacterized protein LOC1114619374.5e-2365.26Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FFRGHGL +N    ADPSVE N PGGVF+GRFIPA +T   +           A AVIDDP NLYFALVSQR IPI SFDF+YNFLF+NS+TSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

A0A6J1JT55 uncharacterized protein LOC1114872644.5e-2365.26Show/hide
Query:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR
        FFRGHGL +N    ADPSVE N PGGVF+GRFIPA +T   +           A AVIDDP NLYFALVSQR IPI SFDF+YNFLF+NS+TSLR
Subjt:  FFRGHGLLFN---DADPSVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52060.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein2.5e-1042.7Show/hide
Query:  FFRGHGLLFN---DADP--SVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLF
        FF+GH  L+N    ADP  SV   L       +FIPA +T   +           A A++DDP NLYFAL+SQ  IP+ SF +I+N LF
Subjt:  FFRGHGLLFN---DADP--SVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLF

AT3G52060.2 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein2.5e-1042.7Show/hide
Query:  FFRGHGLLFN---DADP--SVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLF
        FF+GH  L+N    ADP  SV   L       +FIPA +T   +           A A++DDP NLYFAL+SQ  IP+ SF +I+N LF
Subjt:  FFRGHGLLFN---DADP--SVEFNLPGGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLF

AT4G32290.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein3.2e-0536.99Show/hide
Query:  ADPSVEFNLP-GGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFL
        ADP+ E++ P  GVF  R I +  ++              A A++DDP N  FA++S   +PI+SFDF Y  L
Subjt:  ADPSVEFNLP-GGVFEGRFIPAGKTISDN-----------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFL

AT5G22070.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein1.1e-0840Show/hide
Query:  FFRGHG-LLFN---DADPSVEFNLP--GGVFEGRFIPAGKTISDN------------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSI
        FF GH   L+N    ADP V    P  G VFE  FI   K  +              A A +DDP N YFA++SQ  IP+ SF+++Y+ LF +SI
Subjt:  FFRGHG-LLFN---DADPSVEFNLP--GGVFEGRFIPAGKTISDN------------ARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTTCCGCGGCCATGGATTGCTCTTCAATGACGCCGATCCCTCTGTCGAATTCAACCTTCCCGGCGGTGTCTTCGAAGGCCGATTCATTCCGGCGGGGAAGACCATCTC
CGACAACGCGCGTGCTGTCATCGACGATCCTCAGAATCTCTACTTTGCCCTCGTCTCTCAACGCCGTATCCCTATCCAATCCTTCGATTTCATCTACAATTTCTTGTTTA
GAAACTCTATTACTTCGCTCCGG
mRNA sequenceShow/hide mRNA sequence
TTCTTCCGCGGCCATGGATTGCTCTTCAATGACGCCGATCCCTCTGTCGAATTCAACCTTCCCGGCGGTGTCTTCGAAGGCCGATTCATTCCGGCGGGGAAGACCATCTC
CGACAACGCGCGTGCTGTCATCGACGATCCTCAGAATCTCTACTTTGCCCTCGTCTCTCAACGCCGTATCCCTATCCAATCCTTCGATTTCATCTACAATTTCTTGTTTA
GAAACTCTATTACTTCGCTCCGG
Protein sequenceShow/hide protein sequence
FFRGHGLLFNDADPSVEFNLPGGVFEGRFIPAGKTISDNARAVIDDPQNLYFALVSQRRIPIQSFDFIYNFLFRNSITSLR