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MS009161 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009161
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSHSP domain-containing protein
Genome locationscaffold220:331416..331834
RNA-Seq ExpressionMS009161
SyntenyMS009161
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR045045 - Small heat shock protein RTM2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]8.8e-2157.27Show/hide
Query:  MSSQNVSRQDWRN-LAQSNQPFNPQATWDTS--GNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN
        MSSQ V+ QDWRN + Q NQ F P  T++ S   N+   +M+L GFS+D LRINLNT T  ++V GQKSDG FN+TRLNER+ I EDC L+GV+AK  N+
Subjt:  MSSQNVSRQDWRN-LAQSNQPFNPQATWDTS--GNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN

Query:  TLTVIFKKNK
        TL V F+K K
Subjt:  TLTVIFKKNK

KAG6578833.1 Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.6e-0646.27Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSD
        MSSQ +  QDWR++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK D
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSD

KAG6602241.1 hypothetical protein SDJN03_07474, partial [Cucurbita argyrosperma subsp. sororia]9.2e-1034.26Show/hide
Query:  VSRQ--DWRNLAQSNQPFNPQATW----DTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        +SRQ   W  + Q  + + P   W    +T+ +  ++ +  SG SR+ L+I+++    T+ +   K +G+N+ R+NE IPI  +CSLD V A F+NN L 
Subjt:  VSRQ--DWRNLAQSNQPFNPQATW----DTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKNKN
        + F K  N
Subjt:  VIFKKNKN

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]4.1e-1850.47Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        MSSQ +  QDWR++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK DG FN+ RLNERI I++ CSLDGV A+  ++TL 
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKNK
        V F K K
Subjt:  VIFKKNK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]3.5e-1749.53Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        MSSQ +  QDW ++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK DG FN+ RLNERI I++ CSLDGV A+  + TL 
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKNK
        V F K K
Subjt:  VIFKKNK

TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein4.3e-2157.27Show/hide
Query:  MSSQNVSRQDWRN-LAQSNQPFNPQATWDTS--GNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN
        MSSQ V+ QDWRN + Q NQ F P  T++ S   N+   +M+L GFS+D LRINLNT T  ++V GQKSDG FN+TRLNER+ I EDC L+GV+AK  N+
Subjt:  MSSQNVSRQDWRN-LAQSNQPFNPQATWDTS--GNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNN

Query:  TLTVIFKKNK
        TL V F+K K
Subjt:  TLTVIFKKNK

A0A2P5BK14 Small heat shock protein HSP4.3e-0530.43Show/hide
Query:  NLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKK
        ++ +S + F P   W        L + L GFS++HLR+ LN      I   Q  D   ++R  + I +++DC +D +RAKF    L +   K
Subjt:  NLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKK

A0A2P5C3N1 Small heat shock protein HSP4.7e-0430.34Show/hide
Query:  QSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKK
        +S + F P   W        L + L GFS+++LR+ LN      I   Q  D   ++R  + I +++DC +D +RAKF    L +   K
Subjt:  QSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKK

A0A6J1FGX8 uncharacterized protein LOC1114452971.7e-1749.53Show/hide
Query:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT
        MSSQ +  QDW ++ +S+QPF+P   W    +   L+M+L GF ++ L+I LN +T TL V GQK DG FN+ RLNERI I++ CSLDGV A+  + TL 
Subjt:  MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDG-FNVTRLNERIPINEDCSLDGVRAKFLNNTLT

Query:  VIFKKNK
        V F K K
Subjt:  VIFKKNK

A0A6P5FK38 uncharacterized protein LOC1097156172.1e-0435.8Show/hide
Query:  FNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVI
        F P +TW+ +     L + + GF R+HL++ +++S N L V+GQ  DG      + R+P  + C+L G+RAKF ++T T++
Subjt:  FNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27140.1 HSP20-like chaperones superfamily protein2.7e-0431.52Show/hide
Query:  DWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNV-TRLNERIPINEDCSLDGVRAKFLNNTLTV
        D  N  +    F P + W T      LT+ L GF ++ L++ + T+T  L V G +  G N   R  +  PI  +  +D V AKF    L V
Subjt:  DWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNV-TRLNERIPINEDCSLDGVRAKFLNNTLTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGTCAGAACGTGTCACGACAAGATTGGAGAAACTTAGCGCAATCAAATCAACCGTTTAATCCACAAGCAACATGGGATACCAGTGGTAATGAAATACAACTGAC
CATGCAACTTTCAGGGTTTTCAAGGGATCATCTACGAATCAATTTGAACACGAGTACAAATACTCTTATAGTTGCGGGACAAAAATCCGATGGCTTCAATGTCACTCGTT
TGAATGAACGCATACCAATTAATGAAGATTGCTCATTGGATGGAGTCCGTGCAAAATTTCTCAATAACACTCTTACTGTAATATTTAAAAAAAATAAAAAT
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGTCAGAACGTGTCACGACAAGATTGGAGAAACTTAGCGCAATCAAATCAACCGTTTAATCCACAAGCAACATGGGATACCAGTGGTAATGAAATACAACTGAC
CATGCAACTTTCAGGGTTTTCAAGGGATCATCTACGAATCAATTTGAACACGAGTACAAATACTCTTATAGTTGCGGGACAAAAATCCGATGGCTTCAATGTCACTCGTT
TGAATGAACGCATACCAATTAATGAAGATTGCTCATTGGATGGAGTCCGTGCAAAATTTCTCAATAACACTCTTACTGTAATATTTAAAAAAAATAAAAAT
Protein sequenceShow/hide protein sequence
MSSQNVSRQDWRNLAQSNQPFNPQATWDTSGNEIQLTMQLSGFSRDHLRINLNTSTNTLIVAGQKSDGFNVTRLNERIPINEDCSLDGVRAKFLNNTLTVIFKKNKN