CuGenDBv2

Gene ID	MS009171
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Epidermal patterning factor-like protein
Genome location	scaffold220:458333..459048
RNA-Seq Expression	MS009171
Synteny	MS009171
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140931.1 protein EPIDERMAL PATTERNING FACTOR 2 [Cucumis sativus]

8.2e-52

83.9

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK+  LVAH+S +FV+FFIILMIG SLDAT RW+HMSFNAED HRT++ S HQ+E+ KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYY VPSN
Subjt:  PTVYRCMCKGKYYHVPSN

XP_008456675.1 PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]

1.4e-51

83.9

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK+  LVAH+S +F +FFIILMIGRSLDA +RW+HMSFNAED HRTV++S +Q+E+ KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

XP_022134337.1 protein EPIDERMAL PATTERNING FACTOR 2-like [Momordica charantia]

7.9e-63

100

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

XP_022957958.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Cucurbita moschata]

4.8e-52

83.05

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MKK S+VAH+S +F +FFIILMIGRSLD T+RW+HMS+NAED HRT  S   ++E+AKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

XP_038885051.1 protein EPIDERMAL PATTERNING FACTOR 2-like [Benincasa hispida]

8.2e-52

82.2

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK   LVAH S +F +FFIILM GRSLDAT+RW+HMSFNAED HR VD+S H++E+ +EVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVY+CMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB66 Epidermal patterning factor-like protein

4.0e-52

83.9

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK+  LVAH+S +FV+FFIILMIG SLDAT RW+HMSFNAED HRT++ S HQ+E+ KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYY VPSN
Subjt:  PTVYRCMCKGKYYHVPSN

A0A1S3C3W6 Epidermal patterning factor-like protein

6.7e-52

83.9

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MK+  LVAH+S +F +FFIILMIGRSLDA +RW+HMSFNAED HRTV++S +Q+E+ KEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

A0A6J1BZC6 Epidermal patterning factor-like protein

3.8e-63

100

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

A0A6J1H1R6 Epidermal patterning factor-like protein

2.3e-52

83.05

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MKK S+VAH+S +F +FFIILMIGRSLD T+RW+HMS+NAED HRT  S   ++E+AKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

A0A6J1JIW8 Epidermal patterning factor-like protein

4.8e-50

80.51

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MKK S+VAH+S +  +FFIILMIGRSLD T+ W++MSF+AED HRT  S   ++E+AKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Query:  PTVYRCMCKGKYYHVPSN
        PTVYRCMCKGKYYHVPSN
Subjt:  PTVYRCMCKGKYYHVPSN

SwissProt top hits

e value

%identity

Alignment

C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 7

1.4e-17

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Query:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS
        +GSS+PDCS+ACGPC PCK V++S  CS +E+CP VY+C+CKGKYYHVPS
Subjt:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS

Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 2

2.2e-23

70.15

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Query:  HQKERAKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS
        H+KE +K   + ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC  +YRC C+G+YYHVPS
Subjt:  HQKERAKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS

Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 1

1.3e-12

37.82

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VA
        MK   L+A     F+ FF   ++ R L  +S   H        H  +  ++ ++ R  + + +     GS LPDCSHACG C PC+ VMVSF C+    A
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VA

Query:  ESCPTVYRCMCKGKYYHVP
        E+CP  Y+CMC  K Y VP
Subjt:  ESCPTVYRCMCKGKYYHVP

Arabidopsis top hits

e value

%identity

Alignment

AT1G34245.1 Putative membrane lipoprotein

1.5e-24

70.15

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Query:  HQKERAKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS
        H+KE +K   + ME+YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC  +YRC C+G+YYHVPS
Subjt:  HQKERAKE-VLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS

AT1G71866.1 LOCATED IN: endomembrane system

9.7e-19

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Query:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS
        +GSS+PDCS+ACGPC PCK V++S  CS +E+CP VY+C+CKGKYYHVPS
Subjt:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKGKYYHVPS

AT2G20875.1 epidermal patterning factor 1

9.4e-14

37.82

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Query:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VA
        MK   L+A     F+ FF   ++ R L  +S   H        H  +  ++ ++ R  + + +     GS LPDCSHACG C PC+ VMVSF C+    A
Subjt:  MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCS---VA

Query:  ESCPTVYRCMCKGKYYHVP
        E+CP  Y+CMC  K Y VP
Subjt:  ESCPTVYRCMCKGKYYHVP

Sequences

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CDS sequence

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ATGAAGAAATGTTCTCTGGTAGCTCACCTGTCTTTTATTTTTGTGGTTTTCTTCATCATTCTAATGATTGGCAGAAGTCTTGATGCAACATCTCGCTGGGAACACATGAG
CTTTAATGCAGAAGATATTCACAGAACAGTGGACAGTTCAATGCACCAGAAGGAAAGGGCTAAAGAAGTACTTGGTATGGAGTTATACCCTACAGGATCCAGCCTCCCAG
ACTGCTCCCATGCATGCGGTCCATGTTTTCCATGCAAAAGGGTGATGGTGAGCTTCAAGTGCTCTGTTGCAGAGTCCTGTCCAACTGTTTACAGATGCATGTGTAAAGGG
AAATATTACCATGTACCCTCCAAT

mRNA sequence

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Protein sequence

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MKKCSLVAHLSFIFVVFFIILMIGRSLDATSRWEHMSFNAEDIHRTVDSSMHQKERAKEVLGMELYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCPTVYRCMCKG
KYYHVPSN

MS009171 (gene) of Bitter gourd (TR) v1 genome