CuGenDBv2

Gene ID	MS009186
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	WD repeat protein
Genome location	scaffold220:575968..578598
RNA-Seq Expression	MS009186
Synteny	MS009186
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140944.1 uncharacterized protein LOC101218374 [Cucumis sativus]

7.7e-92

86.84

Show/hide

Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+ESEIRE+EET S SE QPLL++ NPSS+SK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLE+R+ILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI+TILITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRT+DLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]

1.6e-92

87.89

Show/hide

Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+E+EIRE++ET S SE QPLL++QNPSS+SK VKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLE+R+ILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI+TILITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

XP_022134510.1 uncharacterized protein LOC111006735 [Momordica charantia]

2.2e-102

100

Show/hide

Query:  NPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFN
        NPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFN
Subjt:  NPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFN

Query:  PRNGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFG
        PRNGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFG
Subjt:  PRNGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFG

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]

3.8e-91

88.54

Show/hide

Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+ESEIREIEET SNSE QPLLQSQNPSS+S+ VKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLE+REILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFL--SRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYRDGAEIYIDGEPKDSLIKP+TRI+F VAI+TILIT L  SR SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFL--SRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

XP_038884244.1 uncharacterized protein LOC120075142 [Benincasa hispida]

1.5e-90

85.79

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Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+ESEIRE+E+T S SE QPLL+SQNP+ +SK V+TKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLE+R+IL+KYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVA++TILITFLSR+SQG MKK NI+GNFPPWILACVVIVFTRSRKRTRDLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9G4 Uncharacterized protein

3.7e-92

86.84

Show/hide

Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+ESEIRE+EET S SE QPLL++ NPSS+SK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLE+R+ILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI+TILITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRT+DLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

A0A1S3C3V7 uncharacterized protein LOC103496571

7.5e-93

87.89

Show/hide

Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+E+EIRE++ET S SE QPLL++QNPSS+SK VKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLE+R+ILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI+TILITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

A0A6J1BYH2 uncharacterized protein LOC111006735

1.0e-102

100

Show/hide

Query:  NPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFN
        NPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFN
Subjt:  NPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFN

Query:  PRNGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFG
        PRNGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFG
Subjt:  PRNGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFG

A0A6J1HAT7 uncharacterized protein LOC111461110

3.0e-89

86.98

Show/hide

Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+ESEIREIEET SNSE QPLLQSQNPSS+SK VKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLE+REILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFL--SRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYR GAEIYIDGEPKDSLIKP+T I+F VAI+TI+IT L  SR SQG MK LNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFL--SRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

A0A6J1JTD1 uncharacterized protein LOC111487320

1.8e-91

88.54

Show/hide

Query:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR
        Q+ESEIREIEET SNSE QPLLQSQNPSS+S+ VKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLE+REILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFL--SRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        NGRSILTYRDGAEIYIDGEPKDSLIKP+TRI+F VAI+TILIT L  SR SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+GW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFL--SRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71780.1 unknown protein

2.2e-65

64.52

Show/hide

Query:  REIEETGSNSEQQPLLQSQNPSSD--SKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPRNGRS
        +EIEET       PLL++  P S+  S     KVPEVEIHLY+ GKGPIDVFKS+LGG++QDQLE+R IL+KYG K+ FAF  E GR VPIRF+PRNGRS
Subjt:  REIEETGSNSEQQPLLQSQNPSSD--SKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPRNGRS

Query:  ILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW
        +L YRDGA IYIDGEP+DSL+KPITRII GV I+T+LITFL ++    +K     G FPPW+LAC+VIVFTR+RKRTRD  KK+GW
Subjt:  ILTYRDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

Sequences

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CDS sequence

Show/hide CDS sequence

AATCCACAGAACGAGAGCGAAATTCGAGAAATTGAAGAGACAGGATCGAACTCCGAGCAGCAACCTCTTCTTCAGAGCCAGAATCCGAGTTCAGACTCAAAAAACGTGAA
GACGAAGGTTCCGGAGGTTGAAATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCGAGCCTTGGGGGTTGGGATCAAGACCAGCTCGAGATCCGAG
AGATTCTCGACAAATACGGGTTCAAGTCGGCATTCGCCTTTAAACCTGAGGCCGGCCGTGGCGTCCCGATCCGATTCAACCCTAGAAATGGCAGGTCTATACTGACGTAC
AGAGATGGAGCGGAGATTTACATCGACGGAGAGCCCAAGGATTCCCTGATCAAACCAATAACCAGGATTATTTTTGGCGTGGCGATTTTAACGATTTTGATAACTTTTCT
CTCTCGAGAGTCGCAAGGATTGATGAAGAAATTAAATATAAGTGGGAACTTCCCTCCTTGGATTCTTGCCTGTGTAGTTATCGTTTTTACACGCTCAAGGAAGAGAACAA
GGGACTTGCTGAAAAAGTTCGGTTGG

mRNA sequence

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Protein sequence

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NPQNESEIREIEETGSNSEQQPLLQSQNPSSDSKNVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWDQDQLEIREILDKYGFKSAFAFKPEAGRGVPIRFNPRNGRSILTY
RDGAEIYIDGEPKDSLIKPITRIIFGVAILTILITFLSRESQGLMKKLNISGNFPPWILACVVIVFTRSRKRTRDLLKKFGW

MS009186 (gene) of Bitter gourd (TR) v1 genome