CuGenDBv2

Gene ID	MS009190
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MRN complex-interacting protein isoform X2
Genome location	scaffold220:617222..617673
RNA-Seq Expression	MS009190
Synteny	MS009190
Gene Ontology terms	GO:0007095 - mitotic G2 DNA damage checkpoint (biological process) GO:0005634 - nucleus (cellular component) GO:0003682 - chromatin binding (molecular function)
InterPro domains	IPR032739 - MRN complex-interacting protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022133808.1 uncharacterized protein LOC111006279 [Momordica charantia]

1.7e-60

100

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWS
        MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWS
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWS

Query:  AYLDLEEDRSQSGRGNEPEIG
        AYLDLEEDRSQSGRGNEPEIG
Subjt:  AYLDLEEDRSQSGRGNEPEIG

XP_022939429.1 MRN complex-interacting protein isoform X1 [Cucurbita moschata]

1.0e-44

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI  +D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

XP_023549685.1 MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo]

1.0e-44

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI  +D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

XP_023549686.1 MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo]

1.0e-44

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI  +D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

XP_023549688.1 MRN complex-interacting protein isoform X4 [Cucurbita pepo subsp. pepo]

1.0e-44

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI  +D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C0A7 uncharacterized protein LOC111006279

8.2e-61

100

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWS
        MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWS
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWS

Query:  AYLDLEEDRSQSGRGNEPEIG
        AYLDLEEDRSQSGRGNEPEIG
Subjt:  AYLDLEEDRSQSGRGNEPEIG

A0A6J1FH51 MRN complex-interacting protein isoform X1

4.8e-45

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI  +D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

A0A6J1FMP0 MRN complex-interacting protein isoform X2

4.8e-45

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI  +D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACST-RKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

A0A6J1JU86 MRN complex-interacting protein isoform X2

1.1e-44

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACS-TRKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI   D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACS-TRKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

A0A6J1JWE4 MRN complex-interacting protein isoform X1

1.1e-44

82.79

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Query:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACS-TRKRRSDW
        MSTIFIAVQCFQCSTMQVKQQRRSGNKW CAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQ +V+EI   D  IVD+ QL  +  RKRRSDW
Subjt:  MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACS-TRKRRSDW

Query:  SAYLDLEEDRSQSGRGNEPEIG
        S YLDLEEDRSQ+GR NE E+G
Subjt:  SAYLDLEEDRSQSGRGNEPEIG

SwissProt top hits

e value

%identity

Alignment

Q32PP1 MRN complex-interacting protein

2.8e-05

32.26

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Query:  FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVE-EIVLVDGVIVDDGQLACSTRKRRSD-----
        F  ++CF C T QV QQ +   KW C VC EKQS+ K F R   A D R+ VQ  N  R    EQ Q+  + +L  G   ++ +        +S+     
Subjt:  FIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVE-EIVLVDGVIVDDGQLACSTRKRRSD-----

Query:  ---WSAYLDLEEDRSQSGRGNEPE
           WS Y D   +     + +E E
Subjt:  ---WSAYLDLEEDRSQSGRGNEPE

Arabidopsis top hits

e value

%identity

Alignment

AT1G71760.1 unknown protein

6.5e-26

52.38

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Query:  STIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSA
        ST+FIA+QC++CSTMQVKQ+++S NKW C +CN+KQSV+KVFA+   AK++R FVQSFNMSRK ADE+         +  +  +     +  K+RSDWS 
Subjt:  STIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSA

Query:  YLDLE
        YLD +
Subjt:  YLDLE

AT1G71760.2 unknown protein

6.5e-26

52.38

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Query:  STIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSA
        ST+FIA+QC++CSTMQVKQ+++S NKW C +CN+KQSV+KVFA+   AK++R FVQSFNMSRK ADE+         +  +  +     +  K+RSDWS 
Subjt:  STIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSA

Query:  YLDLE
        YLD +
Subjt:  YLDLE

Sequences

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CDS sequence

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ATGTCGACGATCTTCATCGCCGTCCAGTGTTTCCAATGCTCCACCATGCAGGTGAAGCAGCAGCGGAGGAGCGGGAATAAATGGAACTGTGCAGTGTGCAACGAGAAGCA
ATCGGTGCAGAAGGTGTTTGCTCGAGCTCCAATGGCTAAAGACGTCCGTAAATTCGTACAGAGTTTCAACATGTCTCGGAAATATGCGGATGAACAGAAGCAAGTCGAGG
AGATAGTACTAGTAGATGGAGTAATTGTTGATGACGGCCAGCTTGCCTGCAGCACGAGGAAAAGGCGTAGCGATTGGAGTGCTTACCTCGATCTCGAGGAAGATCGCAGC
CAAAGTGGAAGAGGAAACGAACCAGAAATAGGTCAC

mRNA sequence

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Protein sequence

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MSTIFIAVQCFQCSTMQVKQQRRSGNKWNCAVCNEKQSVQKVFARAPMAKDVRKFVQSFNMSRKYADEQKQVEEIVLVDGVIVDDGQLACSTRKRRSDWSAYLDLEEDRS
QSGRGNEPEIGH

MS009190 (gene) of Bitter gourd (TR) v1 genome