; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009204 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009204
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlight-harvesting complex-like protein OHP2, chloroplastic
Genome locationscaffold220:734220..735480
RNA-Seq ExpressionMS009204
SyntenyMS009204
Gene Ontology termsGO:0006850 - mitochondrial pyruvate transmembrane transport (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009579 - thylakoid (cellular component)
GO:0031305 - integral component of mitochondrial inner membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
GO:0050833 - pyruvate transmembrane transporter activity (molecular function)
InterPro domainsIPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032876.1 Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]4.6e-6577.84Show/hide
Query:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA
        MSGACS PFAK       + S A SPS SAA+S SSSS H+SIRFSSSKPFVFTIRSSQT+GP+RRPAAPSLREPSPP      PP   PPP   +APVA
Subjt:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA

Query:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        QSS +A+ AKQDN ITLEFQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDL+
Subjt:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

XP_022133509.1 light-harvesting complex-like protein OHP2, chloroplastic [Momordica charantia]5.4e-90100Show/hide
Query:  MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAF
        MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAF
Subjt:  MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAF

Query:  AAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        AAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
Subjt:  AAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

XP_022963822.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata]1.7e-6477.32Show/hide
Query:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA
        MSGACS PFAK       + S A SPS SAA+S SSSS H+SIRFSSSKPFVFTIRSSQT+GP+RRPAAPSLREPSPP      PP   PPP   +APVA
Subjt:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA

Query:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        Q S +A+ AKQDN ITLEFQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDL+
Subjt:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

XP_023551626.1 light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-6478.35Show/hide
Query:  MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA
        MSGACSIPFAK   PA        SPS SA +SASSSS H+SIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPP   +PTPP +  PPP  + P  
Subjt:  MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA

Query:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
             A+AAK DNVITLEFQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDLE
Subjt:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

XP_038884716.1 light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida]3.5e-6577.55Show/hide
Query:  MSGACSIPFAK--------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPP-SQSPPPPPPSAP
        MSGACSIPFAK        +P+ A SPS SA++SASSSSPH S+RFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPP   +PTPP   +PPP  P +P
Subjt:  MSGACSIPFAK--------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPP-SQSPPPPPPSAP

Query:  VAQSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        V+         KQDNVITLEFQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDLE
Subjt:  VAQSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

TrEMBL top hitse value%identityAlignment
A0A6J1BW66 light-harvesting complex-like protein OHP2, chloroplastic2.6e-90100Show/hide
Query:  MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAF
        MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAF
Subjt:  MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAF

Query:  AAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        AAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
Subjt:  AAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

A0A6J1FIC8 light-harvesting complex-like protein OHP2, chloroplastic1.4e-6477.84Show/hide
Query:  MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA
        MSGACSIPFAK   PA        SPS SA +SASSSS H+SIRFSS+KPFVFTIRSSQTEGPLRRPAAPSLREPSPP   +PTPP +  PPP  + P  
Subjt:  MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA

Query:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
             A+AAK DNVITLEFQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDLE
Subjt:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

A0A6J1HG91 light-harvesting complex-like protein OHP2, chloroplastic8.4e-6577.32Show/hide
Query:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA
        MSGACS PFAK       + S A SPS SAA+S SSSS H+SIRFSSSKPFVFTIRSSQT+GP+RRPAAPSLREPSPP      PP   PPP   +APVA
Subjt:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA

Query:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        Q S +A+ AKQDN ITLEFQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDL+
Subjt:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

A0A6J1JS47 light-harvesting complex-like protein OHP2, chloroplastic1.0e-6275.26Show/hide
Query:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA
        MSGACS PFAK       + S A SPS SA +S SSSS H+SIRFSSSKPFVFTIRSSQT+GP+RRPAAPSLREPSPP      PP   P P   +AP +
Subjt:  MSGACSIPFAK-------TPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA

Query:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        Q S +A+ AKQDN ITLEFQRQKAKELQE+FKQKKL++A+QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDL+
Subjt:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

A0A6J1K1U3 light-harvesting complex-like protein OHP2, chloroplastic2.7e-6377.32Show/hide
Query:  MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA
        MSGACSIPFAK   PA        SPS SA +SASSSS H+SIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPP   +PTPP +  PP   + P  
Subjt:  MSGACSIPFAKTPSPA-------PSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVA

Query:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
             A+AAK DNVITLEFQRQKAKELQE+FKQKKL++ +QGPFFGFIGKNEISNGRWAMFGFAVG+LTEYATGSNFVDQVKILLSNFGIVDLE
Subjt:  QSSMQAFAAKQDNVITLEFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

SwissProt top hitse value%identityAlignment
Q9FEC1 Light-harvesting complex-like protein OHP2, chloroplastic3.2e-4568.07Show/hide
Query:  AASASSSSPHASIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKELQ
        ++S+SSS+  +S RFS ++KP VF IR SQTEGPLRRP+A P+LREP  P  + P+ PS SPPP PP         +A A    +V T+EFQRQKAKELQ
Subjt:  AASASSSSPHASIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKELQ

Query:  EFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        E+FKQKKLE A QGPFFGF  KNEISNGRWAMFGFAVGMLTEYATGS+ VDQVKILLSNFGI+DLE
Subjt:  EFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE

Arabidopsis top hitse value%identityAlignment
AT1G34000.1 one-helix protein 22.3e-4668.07Show/hide
Query:  AASASSSSPHASIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKELQ
        ++S+SSS+  +S RFS ++KP VF IR SQTEGPLRRP+A P+LREP  P  + P+ PS SPPP PP         +A A    +V T+EFQRQKAKELQ
Subjt:  AASASSSSPHASIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITLEFQRQKAKELQ

Query:  EFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE
        E+FKQKKLE A QGPFFGF  KNEISNGRWAMFGFAVGMLTEYATGS+ VDQVKILLSNFGI+DLE
Subjt:  EFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGGGCCTGTTCAATCCCCTTCGCGAAAACGCCGTCGCCGGCACCGTCGCCGTCGCCGTCGGCCGCTGCCTCTGCTTCTTCATCCTCCCCTCACGCTTCCATCAG
ATTCTCCTCCTCAAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTCCGGAGACCCGCGGCCCCTTCTCTGAGAGAGCCGTCCCCGCCGCCATCTC
TCACACCGACTCCTCCGTCGCAATCGCCTCCGCCTCCGCCGCCGTCGGCTCCTGTTGCTCAGTCGTCGATGCAGGCGTTTGCTGCTAAACAGGATAATGTGATCACGTTG
GAGTTTCAGAGGCAGAAGGCCAAGGAGCTCCAGGAGTTTTTCAAGCAGAAGAAGCTTGAGGACGCCAATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTC
CAATGGGAGGTGGGCAATGTTCGGTTTTGCTGTCGGAATGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTCTCAAATTTTGGGATAG
TAGATCTCGAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGGGCCTGTTCAATCCCCTTCGCGAAAACGCCGTCGCCGGCACCGTCGCCGTCGCCGTCGGCCGCTGCCTCTGCTTCTTCATCCTCCCCTCACGCTTCCATCAG
ATTCTCCTCCTCAAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTCCGGAGACCCGCGGCCCCTTCTCTGAGAGAGCCGTCCCCGCCGCCATCTC
TCACACCGACTCCTCCGTCGCAATCGCCTCCGCCTCCGCCGCCGTCGGCTCCTGTTGCTCAGTCGTCGATGCAGGCGTTTGCTGCTAAACAGGATAATGTGATCACGTTG
GAGTTTCAGAGGCAGAAGGCCAAGGAGCTCCAGGAGTTTTTCAAGCAGAAGAAGCTTGAGGACGCCAATCAGGGACCGTTCTTTGGCTTCATCGGGAAGAATGAAATTTC
CAATGGGAGGTGGGCAATGTTCGGTTTTGCTGTCGGAATGCTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTCCTCTCAAATTTTGGGATAG
TAGATCTCGAA
Protein sequenceShow/hide protein sequence
MSGACSIPFAKTPSPAPSPSPSAAASASSSSPHASIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLREPSPPPSLTPTPPSQSPPPPPPSAPVAQSSMQAFAAKQDNVITL
EFQRQKAKELQEFFKQKKLEDANQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSNFVDQVKILLSNFGIVDLE