| GenBank top hits | e value | %identity | Alignment |
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| KAG6597731.1 General transcription and DNA repair factor IIH subunit TFB1-1, partial [Cucurbita argyrosperma subsp. sororia] | 9.0e-108 | 90.45 | Show/hide |
Query: SLLVFAEGQMGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVC
S L+ ++ +MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+F+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVC
Subjt: SLLVFAEGQMGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVC
Query: REFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPM
REFVGSALAKSGE QA SE+ VATFPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFK+SMVLDTKPM
Subjt: REFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPM
Query: SDGRTNKVTFNLTPEIKYQV
SDGRTNKVTFNLTPEIKYQ+
Subjt: SDGRTNKVTFNLTPEIKYQV
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| KAG7029183.1 putative RNA polymerase II transcription factor B subunit 1-1 [Cucurbita argyrosperma subsp. argyrosperma] | 1.3e-106 | 93.36 | Show/hide |
Query: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+F+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
KSGE QA SE+ VATFPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFK+SMVLDTKPMSDGRTNKVT
Subjt: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQV
FNLTPEIKYQ+
Subjt: FNLTPEIKYQV
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| KGN54745.2 hypothetical protein Csa_012761 [Cucumis sativus] | 1.2e-107 | 88 | Show/hide |
Query: LGRFSSLLVFAEGQMGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFS
L R ++ + +EG+MGTKYV KSAKYKTSVKDPGTPGVLEMTE KF+F+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFS
Subjt: LGRFSSLLVFAEGQMGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFS
Query: DLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVL
DLHVCRE VGSALAK GE AQA SER VA FPHEQLSKLEMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE+DNSKKSKQL+GFK+SMVL
Subjt: DLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVL
Query: DTKPMSDGRTNKVTFNLTPEIKYQV
DTKPMSDGRTNKVTFNLTPEIKYQ+
Subjt: DTKPMSDGRTNKVTFNLTPEIKYQV
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| XP_022155949.1 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Momordica charantia] | 1.1e-113 | 98.58 | Show/hide |
Query: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+FKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Subjt: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQV
FNLTPEIKY++
Subjt: FNLTPEIKYQV
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| XP_022155950.1 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 [Momordica charantia] | 1.1e-113 | 98.58 | Show/hide |
Query: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+FKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Subjt: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQV
FNLTPEIKY++
Subjt: FNLTPEIKYQV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KYD2 PH_TFIIH domain-containing protein | 1.3e-107 | 88.39 | Show/hide |
Query: LGRFSSLLVFAEGQMGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFS
L R ++ + +EG+MGTKYV KSAKYKTSVKDPGTPGVLEMTE KF+F+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFS
Subjt: LGRFSSLLVFAEGQMGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFS
Query: DLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVL
DLHVCRE VGSALAK GE AQA SER VA FPHEQLSKLEMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE+DNSKKSKQL+GFK+SMVL
Subjt: DLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVL
Query: DTKPMSDGRTNKVTFNLTPEIKYQ
DTKPMSDGRTNKVTFNLTPEIKYQ
Subjt: DTKPMSDGRTNKVTFNLTPEIKYQ
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| A0A6J1DNY2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 | 5.3e-114 | 98.58 | Show/hide |
Query: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+FKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Subjt: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQV
FNLTPEIKY++
Subjt: FNLTPEIKYQV
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| A0A6J1DRT9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 5.3e-114 | 98.58 | Show/hide |
Query: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+FKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Subjt: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQV
FNLTPEIKY++
Subjt: FNLTPEIKYQV
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| A0A6J1EXP7 probable RNA polymerase II transcription factor B subunit 1-1 | 6.3e-107 | 93.36 | Show/hide |
Query: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+F+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
KSGE QA SE+ VATFPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFK+SMVLDTKPMSDGRTNKVT
Subjt: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQV
FNLTPEIKYQ+
Subjt: FNLTPEIKYQV
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| A0A6J1IB04 probable RNA polymerase II transcription factor B subunit 1-1 | 6.3e-107 | 93.36 | Show/hide |
Query: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKF+F+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt: MGTKYVQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Query: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
KSGE QA SE+ VATFPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQLVGFK+SMVLDTKPMSDGRTNKVT
Subjt: KSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVT
Query: FNLTPEIKYQV
FNLTPEIKYQ+
Subjt: FNLTPEIKYQV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P32780 General transcription factor IIH subunit 1 | 6.0e-06 | 29.48 | Show/hide |
Query: PTSASKLDVEFRY--IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQE
P + + Y IK K + EG K L L G + F F N S K + + ++ + F + +LE + RM LQE
Subjt: PTSASKLDVEFRY--IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQE
Query: DSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKS--KQLVGFKNSMVLDTKPMSDGRTNKVTFNLTPEI
D L +L+K V+ V++ EFWA R + D+S S KQ VG + + D +P +DG N + +NLT +I
Subjt: DSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKS--KQLVGFKNSMVLDTKPMSDGRTNKVTFNLTPEI
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| Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1 | 6.1e-59 | 57.28 | Show/hide |
Query: VQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGET
++K KYK++VKDPGTPG L + E LF P+DP S SKL V + IK K TKEGSNKPPWLNLT Q S+IFEF+N+ D+H CR+F+ ALAK
Subjt: VQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGET
Query: AQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVTFNLTP
+ + V + EQLS E+ELR K L+E+SELQ+LHKQFV VLTE EFWA RKKLL +D+ +KSKQ +G K+ MV KP +DGRTN+VTFNLTP
Subjt: AQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVTFNLTP
Query: EIKYQV
EI +Q+
Subjt: EIKYQV
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| Q55FP1 General transcription factor IIH subunit 1 | 1.1e-07 | 26.55 | Show/hide |
Query: AKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNK
++ + + + ++++ LS+ +++ R+ LQ + EL++L++Q V V++ES+FW +RK +L+ D+++ KQ G ++++ D +P S+ N
Subjt: AKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNK
Query: VTFNLTPEIKYQV
V + TP + +Q+
Subjt: VTFNLTPEIKYQV
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| Q9DBA9 General transcription factor IIH subunit 1 | 4.6e-06 | 29.65 | Show/hide |
Query: PTSASKLDVEFRY--IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQE
P + + Y IK K + EG K L L G + F F N S K + + ++ + F + +LE + RM LQE
Subjt: PTSASKLDVEFRY--IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGETAQASSERHVATFPHEQLSKLEMELRMKCLQE
Query: DSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKS-KQLVGFKNSMVLDTKPMSDGRTNKVTFNLTPEI
D L +L+K V+ V++ EFWA R + D+S S KQ VG + + D +P +DG N + +NLT +I
Subjt: DSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKS-KQLVGFKNSMVLDTKPMSDGRTNKVTFNLTPEI
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| Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3 | 5.2e-58 | 57.77 | Show/hide |
Query: VQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGET
++K KYK+ VKDPGT G LE++E LF P+DP S KL V+ IK K TKEGSNKPPWLNLT QG S+IFEF+N+ D+H CR+F+ ALAK E
Subjt: VQKSAKYKTSVKDPGTPGVLEMTERKFLFKPSDPTSASKLDVEFRYIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGET
Query: AQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVTFNLTP
+ V P EQLS E ELR K L+E+SELQKLHKQFV VLTE EFW+ RKKLL +D+ +KSKQ +G K+ MV KP +DGRTN+VTFNLT
Subjt: AQASSERHVATFPHEQLSKLEMELRMKCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDNSKKSKQLVGFKNSMVLDTKPMSDGRTNKVTFNLTP
Query: EIKYQV
EI +Q+
Subjt: EIKYQV
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