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MS009263 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009263
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold195:71596..71748
RNA-Seq ExpressionMS009263
SyntenyMS009263
Gene Ontology termsGO:0044255 - cellular lipid metabolic process (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65018.1 hypothetical protein VITISV_018014 [Vitis vinifera]1.2e-0754Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
        WC+GGDFN I  PSER +C   S AM+RF+ +I +L L  +PL +G YTW
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
XP_022154822.1 uncharacterized protein LOC111021983 [Momordica charantia]2.8e-0954.9Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
        WC+GGDFN   WPS++SS  R +++M++FN +I +LDL  +PLS GK+TWS
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
XP_026444566.1 uncharacterized protein LOC113344892 [Papaver somniferum]1.6e-0756Show/hide
Query:  CIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
        C GGDFN + + +ER  C R S +MK FN+L ++LDLV +PLS  KYTWS
Subjt:  CIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
XP_028111264.1 uncharacterized protein LOC114309684 [Camellia sinensis]2.0e-0752Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
        WC+GGD+N I  P ER  CTRSSK M+ FNN +  L+L+ +P+   K+TW
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
XP_042972866.1 uncharacterized protein LOC122304675 [Carya illinoinensis]7.0e-0856.86Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
        WC+GGDFN I++PSERS   R+S AM+ F   I +LDL+ +PL  G+YTWS
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
TrEMBL top hitse value%identityAlignment
A0A2N9F683 Reverse transcriptase domain-containing protein1.7e-0756.86Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
        WCIGGDFN I +PSE+SS   SS AM+ F++ I   +L+ IPL  G YTWS
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
A0A2N9FRZ9 Reverse transcriptase domain-containing protein1.7e-0754Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
        WC+ GDFN + +PSER  CTR S AM+ F++ I    LV +PL  GKYTW
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
A0A2N9GD78 Uncharacterized protein4.4e-0852Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
        WC+ GDFN +W+PSE   CTR S +M+ F++ I    LV +PL  GKYTW
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
A0A6J1DMQ9 uncharacterized protein LOC1110219831.4e-0954.9Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
        WC+GGDFN   WPS++SS  R +++M++FN +I +LDL  +PLS GK+TWS
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS
A5AXK5 Reverse transcriptase domain-containing protein5.8e-0854Show/hide
Query:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
        WC+GGDFN I  PSER +C   S AM+RF+ +I +L L  +PL +G YTW
Subjt:  WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGTGTATTGGTGGCGATTTCAACACAATCTGGTGGCCTTCTGAAAGGTCATCCTGTACCAGATCATCTAAAGCAATGAAGAGGTTTAATAATTTGATTCACAAGCTAGA
TTTGGTGTTAATCCCTTTATCCAAGGGCAAGTACACTTGGTCT
mRNA sequenceShow/hide mRNA sequence
TGGTGTATTGGTGGCGATTTCAACACAATCTGGTGGCCTTCTGAAAGGTCATCCTGTACCAGATCATCTAAAGCAATGAAGAGGTTTAATAATTTGATTCACAAGCTAGA
TTTGGTGTTAATCCCTTTATCCAAGGGCAAGTACACTTGGTCT
Protein sequenceShow/hide protein sequence
WCIGGDFNTIWWPSERSSCTRSSKAMKRFNNLIHKLDLVLIPLSKGKYTWS