| GenBank top hits | e value | %identity | Alignment |
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| KAG6583479.1 DNA-directed RNA polymerase III subunit 1, partial [Cucurbita argyrosperma subsp. sororia] | 7.4e-93 | 93.82 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTK+PYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKC+TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLY DFLRKMRNPKLE LRK ELAKKI+KKCT LTS+NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| XP_008465290.2 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit 1 [Cucumis melo] | 3.3e-93 | 92.13 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTK+PYIEDVGPRKIKSMQFTTFSG+EISK+AEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKCSTCHANFGDCPGHYGY++L+LPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKC+L KKI+KKC+TLT+ NKS KCSRCGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| XP_022964790.1 DNA-directed RNA polymerase III subunit 1 [Cucurbita moschata] | 1.6e-92 | 93.26 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MN+AQVEGLVFTK+PYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKC+TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLY DFLRKMRNPKLE LRK ELAKKI+KKCT LTS+NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| XP_022970436.1 DNA-directed RNA polymerase III subunit 1 [Cucurbita maxima] | 4.8e-92 | 92.7 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MN+ QVEGLVFTK+PYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKC+TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLY DFLRKMRNPKLE LRK ELAKKI+KKCT LTS+NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| XP_023519826.1 DNA-directed RNA polymerase III subunit 1 [Cucurbita pepo subsp. pepo] | 1.6e-92 | 93.26 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MN+AQVEGLVFTK+PYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKC+TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLY DFLRKMRNPKLE LRK ELAKKI+KKCT LTS+NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LSG9 DNA-directed RNA polymerase | 8.8e-100 | 88.18 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTK+PYIEDVGPRKIKSMQFTTFSG+EISK+AEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKC+TCHANFGDCPGHYGY++LALPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGLDFTFYFDVDSS-PHLYVNYNL
FNVGYFTTILEILKCICKSCSRILLEEKL+KDFLRKMRNPKLEALRK +L KKI+KKC+TLT+ NKS +CSRCGYLNGLDFTFYF V SS HLYV +NL
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGLDFTFYFDVDSS-PHLYVNYNL
Query: FTS
F S
Subjt: FTS
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| A0A1S3CNX9 DNA-directed RNA polymerase subunit | 1.6e-93 | 92.13 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MNRAQVEGLVFTK+PYIEDVGPRKIKSMQFTTFSG+EISK+AEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKCSTCHANFGDCPGHYGY++L+LPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKC+L KKI+KKC+TLT+ NKS KCSRCGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| A0A2I4DDG5 DNA-directed RNA polymerase subunit | 1.3e-71 | 72.88 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
M AQ E + FTK PYIEDVGPRKIKSM+F+TFS SEISK+AEVQVYKG YYD R PIEGGLLDPRMGPANK C C+TCH +FG+CPGH+GYL LA+PV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLN
+NVGY +TIL+ILKCICKSC+ ILLEE L K++L+KMR+PK+E L+K EL K IVKKC LTS NK++KCSRCGY+N
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLN
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| A0A6J1HLT9 DNA-directed RNA polymerase subunit | 8.0e-93 | 93.26 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MN+AQVEGLVFTK+PYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKC+TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLY DFLRKMRNPKLE LRK ELAKKI+KKCT LTS+NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| A0A6J1I0L0 DNA-directed RNA polymerase subunit | 2.3e-92 | 92.7 | Show/hide |
Query: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
MN+ QVEGLVFTK+PYIEDVGPRKIKSMQF+TFSGSEISKMAEVQVYKGLYYDTTRKPI+GGLLDPRMGPANKGCKC+TCHANFGDCPGHYGYLSLALPV
Subjt: MNRAQVEGLVFTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPV
Query: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
FNVGYFTTILEILKCICKSCSRILLEEKLY DFLRKMRNPKLE LRK ELAKKI+KKCT LTS+NKSMKCS CGYLNG
Subjt: FNVGYFTTILEILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4JXF9 DNA-directed RNA polymerase III subunit 1 | 8.0e-58 | 63.31 | Show/hide |
Query: FTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
FTK+PYIEDVGP KIKS+ F+ S E+ K AEVQV+ YD + KP E GLLDPRMGP NK C+TC NF +CPGHYGYL L LPV+NVGYF IL
Subjt: FTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
Query: EILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
+ILKCICK CS +LL+EKLY+D LRKMRNP++E L+K ELAK +VKKC+T+ +S + + C +CGYLNG+
Subjt: EILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
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| O94666 DNA-directed RNA polymerase III subunit rpc1 | 1.7e-28 | 40.48 | Show/hide |
Query: KEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQV-YKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILE
K+P I+D P++IK +QF E K V+V + LY T R P E G LD MG +NK C+TC + DC GH+GY+ LALPVF++GYF L
Subjt: KEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQV-YKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILE
Query: ILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
IL+ ICK CS +LL ++ + FL+ +R P ++ LR+ ++ K+I C K +CS+C + G+
Subjt: ILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
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| P04051 DNA-directed RNA polymerase III subunit RPC1 | 3.2e-30 | 40.62 | Show/hide |
Query: PRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD--TTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKS
P++IK ++F+ S ++I +EV+V +D R P G LDP+MG ++ +C+TCH N C GH+G+L LALPVF++GYF ++IL+ ICK+
Subjt: PRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD--TTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKS
Query: CSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
CS ILL E + FL ++R P ++ LR+ + KKI+ +C K +C CG LNG+
Subjt: CSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
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| Q6BI69 DNA-directed RNA polymerase III subunit RPC1 | 2.0e-32 | 38.79 | Show/hide |
Query: IEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTT--RKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILK
+ DV P+ IK ++F S +I +EV+V+ YD R P +GG LD +MG ++ +C+TCH N C GH+G++ LALPVF+VGYF +++L+
Subjt: IEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTT--RKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILK
Query: CICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
CICK+CS +LL+E+ + FL +R P ++ LR+ ++ KK++++C K +C C ++NG+
Subjt: CICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
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| Q86AQ5 DNA-directed RNA polymerase III subunit rpc1 | 5.4e-30 | 41.72 | Show/hide |
Query: EDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD-TTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCI
ED P+KI +QF S +I +++ VQ+ +D RKP G+LD ++G ++K C+TC + DC GH+GY+ L LPVF++GY I+ IL+ I
Subjt: EDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYD-TTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCI
Query: CKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
CKSCS ILL E+ + +LRKMRN K++ L++ L KKI +C K+ +C +CG NG+
Subjt: CKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT2G40030.1 nuclear RNA polymerase D1B | 5.2e-04 | 32.65 | Show/hide |
Query: KCSTCHANFGD-CPGHYGYLSLALPVFNVGYFTTILEILKCICKSCSRI
KC +C A D C GH+GY+ L +P+++ + + ++L +C C +I
Subjt: KCSTCHANFGD-CPGHYGYLSLALPVFNVGYFTTILEILKCICKSCSRI
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| AT4G35800.1 RNA polymerase II large subunit | 3.3e-22 | 41.3 | Show/hide |
Query: KIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTR--KPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKSCS
K++ +QF S EI +M+ + V + +TT KP GGL D R+G ++ KC TC AN +CPGH+GYL LA P+++VG+ T+L I++C+C +CS
Subjt: KIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTR--KPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTILEILKCICKSCS
Query: RILLEEKLYK-DFLRKMRNPKLEALRKCELAKKIVKKC
+IL +E+ +K K++NPK L+K A K KC
Subjt: RILLEEKLYK-DFLRKMRNPKLEALRKCELAKKIVKKC
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| AT5G60040.1 nuclear RNA polymerase C1 | 5.7e-59 | 63.31 | Show/hide |
Query: FTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
FTK+PYIEDVGP KIKS+ F+ S E+ K AEVQV+ YD + KP E GLLDPRMGP NK C+TC NF +CPGHYGYL L LPV+NVGYF IL
Subjt: FTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
Query: EILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
+ILKCICK CS +LL+EKLY+D LRKMRNP++E L+K ELAK +VKKC+T+ +S + + C +CGYLNG+
Subjt: EILKCICKSCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
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| AT5G60040.2 nuclear RNA polymerase C1 | 1.6e-56 | 59.78 | Show/hide |
Query: FTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
FTK+PYIEDVGP KIKS+ F+ S E+ K AEVQV+ YD + KP E GLLDPRMGP NK C+TC NF +CPGHYGYL L LPV+NVGYF IL
Subjt: FTKEPYIEDVGPRKIKSMQFTTFSGSEISKMAEVQVYKGLYYDTTRKPIEGGLLDPRMGPANKGCKCSTCHANFGDCPGHYGYLSLALPVFNVGYFTTIL
Query: EILKCICK----------SCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
+ILKCICK CS +LL+EKLY+D LRKMRNP++E L+K ELAK +VKKC+T+ +S + + C +CGYLNG+
Subjt: EILKCICK----------SCSRILLEEKLYKDFLRKMRNPKLEALRKCELAKKIVKKCTTLTSSNKSMKCSRCGYLNGL
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