; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009287 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009287
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein TAB2 homolog, chloroplastic
Genome locationscaffold813:74155..76072
RNA-Seq ExpressionMS009287
SyntenyMS009287
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR009472 - Tab2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK10428.1 DUF1092 domain-containing protein [Cucumis melo var. makuwa]2.2e-19189.71Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  P SSP SQ IKTANRF  N RI+QQ LRRF SNSVSESSVS PEEVE++E+EDDPTLE+AYLD +TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSL+LQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEK RFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFS VQEE+SNLK TFMFGSSLDLDLLGI+ID+KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+ LILSVGI+TRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_004135937.1 protein TAB2 homolog, chloroplastic [Cucumis sativus]6.4e-19189.45Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  P  SP SQ IKTANRF  N RI+QQ L RF SNSVSESSV+APEEVE++E+EDDPTLE+AYLD +TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDA++SI+EELGVPLP+KIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFS VQEE+SNLK TFMFGSSLDLDLLGIEID+KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+SLILSVGI+TRYVYATYKKTPV +AEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_008461309.1 PREDICTED: uncharacterized protein LOC103499936 [Cucumis melo]2.6e-19290.24Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  P SSP SQ IKTANRF  N RI+QQ LRRF SNSVSESSVS PEEVE++E+EDDPTLE+AYLD +TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFS VQEE+SNLK TFMFGSSLDLDLLGI+ID+KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+ LILSVGI+TRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_022145109.1 protein TAB2 homolog, chloroplastic [Momordica charantia]1.6e-21399.74Show/hide
Query:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELDF
        MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTD ESITEWELDF
Subjt:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELDF

Query:  CSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYE
        CSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYE
Subjt:  CSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYE

Query:  TVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEV
        TVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEV
Subjt:  TVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEV

Query:  YSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        YSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  YSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

XP_038900264.1 protein TAB2 homolog, chloroplastic [Benincasa hispida]3.1e-19391.29Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  PSSSP SQ IKT NRF  + RINQQ LRRF SNSVSESSVSAPEEVE++E+EDDPTLELAYLD  TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGE+WAFVQLPFS VQEEVSNLK TFMFGSSLDLDLLGIEID KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+ LILSVGI+TRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

TrEMBL top hitse value%identityAlignment
A0A0A0K8A7 Uncharacterized protein3.1e-19189.45Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  P  SP SQ IKTANRF  N RI+QQ L RF SNSVSESSV+APEEVE++E+EDDPTLE+AYLD +TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDA++SI+EELGVPLP+KIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFS VQEE+SNLK TFMFGSSLDLDLLGIEID+KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+SLILSVGI+TRYVYATYKKTPV +AEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A1S3CEE7 uncharacterized protein LOC1034999361.3e-19290.24Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  P SSP SQ IKTANRF  N RI+QQ LRRF SNSVSESSVS PEEVE++E+EDDPTLE+AYLD +TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFS VQEE+SNLK TFMFGSSLDLDLLGI+ID+KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+ LILSVGI+TRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A5A7UYM5 DUF1092 domain-containing protein1.3e-19290.24Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  P SSP SQ IKTANRF  N RI+QQ LRRF SNSVSESSVS PEEVE++E+EDDPTLE+AYLD +TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSLSLQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFS VQEE+SNLK TFMFGSSLDLDLLGI+ID+KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+ LILSVGI+TRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A5D3CGT0 DUF1092 domain-containing protein1.1e-19189.71Show/hide
Query:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD
        MATLSFNP RIRT   LH  K  P SSP SQ IKTANRF  N RI+QQ LRRF SNSVSESSVS PEEVE++E+EDDPTLE+AYLD +TDPESITEWELD
Subjt:  MATLSFNPARIRT-PALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELD

Query:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
        FCSRPILDIRGKKVWELV CDNSL+LQYTKYFPNNVINSITLRDAI+SI+EELGVPLPEK RFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY
Subjt:  FCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERY

Query:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME
        ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFS VQEE+SNLK TFMFGSSLDLDLLGI+ID+KTMIPGLSVA+SRAQPLAAWMNGME
Subjt:  ETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGME

Query:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        VYSVEADTSR+ LILSVGI+TRYVYATYKKTPV TAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  VYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

A0A6J1CU88 protein TAB2 homolog, chloroplastic7.6e-21499.74Show/hide
Query:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELDF
        MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTD ESITEWELDF
Subjt:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELDF

Query:  CSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYE
        CSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYE
Subjt:  CSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYE

Query:  TVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEV
        TVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEV
Subjt:  TVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEV

Query:  YSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        YSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
Subjt:  YSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

SwissProt top hitse value%identityAlignment
B4FTR7 Protein TAB2 homolog, chloroplastic2.0e-13966.57Show/hide
Query:  SSSPSSQPIKTANRF----PPNCRINQQQLRRFLSNSVSESSVS---APEEVEVDEEEDDPTLELAYLDPDTDPESITEWELDFCSRPILDIRGKKVWEL
        S S S++P+  A R      P+ R + ++ R   S S +E+S +   A EEVE  E + DP  E+ YLDPD DPESI EWELDFCSRPILD RGKKVWEL
Subjt:  SSSPSSQPIKTANRF----PPNCRINQQQLRRFLSNSVSESSVS---APEEVEVDEEEDDPTLELAYLDPDTDPESITEWELDFCSRPILDIRGKKVWEL

Query:  VACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPL
        V CD +LSLQ+T+YFPNN INS+TLRDA+AS+SE LGVP+P+++RFFRSQMQTIIT+AC +LG+K +PS+RC+SLLLWLEERYE VY+RHPGFQ G++PL
Subjt:  VACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPL

Query:  LALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEVYSVEADTSRSSLILSV
        LALDNPFP  LPENLFG++WAFVQLPFS V+EEV +L+  + FG+ LDL+LLG E+D+ T++PG++V SSRA+PLAAWMNG+E+ ++EADT R+SLILS 
Subjt:  LALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEVYSVEADTSRSSLILSV

Query:  GISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        G+STRYVY+ Y+KT  +T EAEAWEAAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Subjt:  GISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Q6K9C1 Protein TAB2 homolog, chloroplastic3.0e-13563.03Show/hide
Query:  ARIRTPALH-IRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEV-----DEEEDDPTLELAYLDPDTDPESITEWELDFCS
        AR   PA H  R +  +++PSS+  +        CR    +      +S + ++ +A +E EV     +EEE DP  E+ YLDP+ D E I EWELDFCS
Subjt:  ARIRTPALH-IRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEV-----DEEEDDPTLELAYLDPDTDPESITEWELDFCS

Query:  RPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETV
        RPILD RGKKVWELV CD +LSLQ+T++FPN  INS+TLRDA+AS++  LGVPLP++ RFFRSQMQTII++AC ELG+K +PS+RC+SLLLWLEERYETV
Subjt:  RPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETV

Query:  YTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEVYS
        Y+RHPGFQ G+KPLL LDNPFP  LPENLFG++WAFVQLPFS V+EEV +L+  + FG+ LDLDLLG E+D  T+IPG++V SSRA+PLAAWMNG+E+ S
Subjt:  YTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEVYS

Query:  VEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        +E DT R++LILS G+STRYVYA Y+K+   T EAEAWEAAKKACGGLHFLAIQ++L+S+ CVGFWLLLDLPPPPV
Subjt:  VEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Q9SFB3 Protein TAB2 homolog, chloroplastic4.5e-15572.11Show/hide
Query:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEV--DEEEDDPTLELAYLDPDTDPESITEWEL
        MATL FN  RI+TP+L      P  S  ++PIKT + F     + +    RF+S S+ ESS+S  +E EV  + EEDDPT EL+YLDP++D +SI EWEL
Subjt:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEV--DEEEDDPTLELAYLDPDTDPESITEWEL

Query:  DFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEER
        DFCSRPILD RGKK+WELV CD SLSLQ TKYFPNNVINSITL+DAI +I+++LGVPLPEKIRFFRSQMQTIITKAC EL IK +PSKRCLSL LWL+ER
Subjt:  DFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEER

Query:  YETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGM
        Y+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGE+WAFVQLP+S V+EE+S+    F+FG+SLDLDLLGIE+D  T+IPGLSVA+SRA+PLAAWMNG+
Subjt:  YETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGM

Query:  EVYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        EV S+EAD+S+  LILSVGI+TRYVYATYKKTPV T EAEAWE+AKK  GGLHFLAIQDDLDS+DCVGFWLL+DLPPPPV
Subjt:  EVYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV

Arabidopsis top hitse value%identityAlignment
AT3G08010.1 RNA binding3.2e-15672.11Show/hide
Query:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEV--DEEEDDPTLELAYLDPDTDPESITEWEL
        MATL FN  RI+TP+L      P  S  ++PIKT + F     + +    RF+S S+ ESS+S  +E EV  + EEDDPT EL+YLDP++D +SI EWEL
Subjt:  MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEV--DEEEDDPTLELAYLDPDTDPESITEWEL

Query:  DFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEER
        DFCSRPILD RGKK+WELV CD SLSLQ TKYFPNNVINSITL+DAI +I+++LGVPLPEKIRFFRSQMQTIITKAC EL IK +PSKRCLSL LWL+ER
Subjt:  DFCSRPILDIRGKKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEER

Query:  YETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGM
        Y+TVYTRHPGFQKGS PLL+LDNPFPM LPENLFGE+WAFVQLP+S V+EE+S+    F+FG+SLDLDLLGIE+D  T+IPGLSVA+SRA+PLAAWMNG+
Subjt:  YETVYTRHPGFQKGSKPLLALDNPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGM

Query:  EVYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV
        EV S+EAD+S+  LILSVGI+TRYVYATYKKTPV T EAEAWE+AKK  GGLHFLAIQDDLDS+DCVGFWLL+DLPPPPV
Subjt:  EVYSVEADTSRSSLILSVGISTRYVYATYKKTPVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCTTAAGCTTCAACCCCGCCAGAATCAGAACCCCAGCTCTTCACATTCGCAAACTCAACCCCAGCTCGTCGCCATCTTCACAGCCGATCAAAACCGCGAACAG
ATTCCCGCCCAATTGCCGTATCAATCAACAACAACTACGTCGTTTTCTATCGAATTCTGTATCGGAAAGCTCGGTTTCGGCGCCGGAAGAGGTGGAAGTTGACGAGGAAG
AGGATGACCCGACCTTGGAGTTGGCCTATTTGGATCCTGATACCGATCCGGAGAGCATTACGGAGTGGGAGCTCGACTTCTGCTCCAGACCTATTTTGGATATCAGAGGG
AAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCCCTCTCGCTTCAGTACACGAAGTATTTTCCGAACAATGTTATTAACAGTATTACTTTGAGGGACGCGATTGCGTC
GATCAGTGAAGAGTTAGGGGTTCCATTACCGGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGCACCGAGCTTGGCATAAAGCCCATTC
CTAGTAAAAGGTGCCTTTCCCTGCTTTTGTGGCTTGAAGAGCGGTACGAGACGGTTTATACGCGTCATCCAGGATTTCAGAAAGGATCTAAGCCCCTCCTTGCATTAGAC
AATCCATTTCCAATGGAACTTCCAGAAAATCTTTTTGGGGAGAGGTGGGCATTTGTCCAATTGCCCTTTTCAGTTGTTCAAGAGGAAGTCTCAAACTTAAAGGCAACTTT
TATGTTCGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATCGACAATAAGACAATGATTCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCACTGGCAGCTT
GGATGAATGGAATGGAAGTCTATTCAGTCGAAGCTGATACATCTCGCTCTAGTTTGATTCTATCAGTCGGGATCTCAACCCGTTATGTCTATGCAACCTATAAAAAAACT
CCAGTAGCAACTGCTGAAGCTGAAGCCTGGGAAGCAGCAAAAAAGGCTTGTGGAGGGTTGCATTTTCTTGCCATACAAGATGACTTGGACTCAGAGGACTGTGTTGGATT
CTGGCTTCTACTAGACTTGCCGCCGCCGCCAGTA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCTTAAGCTTCAACCCCGCCAGAATCAGAACCCCAGCTCTTCACATTCGCAAACTCAACCCCAGCTCGTCGCCATCTTCACAGCCGATCAAAACCGCGAACAG
ATTCCCGCCCAATTGCCGTATCAATCAACAACAACTACGTCGTTTTCTATCGAATTCTGTATCGGAAAGCTCGGTTTCGGCGCCGGAAGAGGTGGAAGTTGACGAGGAAG
AGGATGACCCGACCTTGGAGTTGGCCTATTTGGATCCTGATACCGATCCGGAGAGCATTACGGAGTGGGAGCTCGACTTCTGCTCCAGACCTATTTTGGATATCAGAGGG
AAGAAGGTGTGGGAGCTTGTAGCGTGTGATAATTCCCTCTCGCTTCAGTACACGAAGTATTTTCCGAACAATGTTATTAACAGTATTACTTTGAGGGACGCGATTGCGTC
GATCAGTGAAGAGTTAGGGGTTCCATTACCGGAGAAAATCCGCTTCTTCAGGTCACAGATGCAGACAATCATTACAAAAGCATGCACCGAGCTTGGCATAAAGCCCATTC
CTAGTAAAAGGTGCCTTTCCCTGCTTTTGTGGCTTGAAGAGCGGTACGAGACGGTTTATACGCGTCATCCAGGATTTCAGAAAGGATCTAAGCCCCTCCTTGCATTAGAC
AATCCATTTCCAATGGAACTTCCAGAAAATCTTTTTGGGGAGAGGTGGGCATTTGTCCAATTGCCCTTTTCAGTTGTTCAAGAGGAAGTCTCAAACTTAAAGGCAACTTT
TATGTTCGGTTCCAGTCTTGATCTGGATTTACTGGGGATCGAAATCGACAATAAGACAATGATTCCAGGGTTGTCTGTTGCATCTTCACGAGCTCAACCACTGGCAGCTT
GGATGAATGGAATGGAAGTCTATTCAGTCGAAGCTGATACATCTCGCTCTAGTTTGATTCTATCAGTCGGGATCTCAACCCGTTATGTCTATGCAACCTATAAAAAAACT
CCAGTAGCAACTGCTGAAGCTGAAGCCTGGGAAGCAGCAAAAAAGGCTTGTGGAGGGTTGCATTTTCTTGCCATACAAGATGACTTGGACTCAGAGGACTGTGTTGGATT
CTGGCTTCTACTAGACTTGCCGCCGCCGCCAGTA
Protein sequenceShow/hide protein sequence
MATLSFNPARIRTPALHIRKLNPSSSPSSQPIKTANRFPPNCRINQQQLRRFLSNSVSESSVSAPEEVEVDEEEDDPTLELAYLDPDTDPESITEWELDFCSRPILDIRG
KKVWELVACDNSLSLQYTKYFPNNVINSITLRDAIASISEELGVPLPEKIRFFRSQMQTIITKACTELGIKPIPSKRCLSLLLWLEERYETVYTRHPGFQKGSKPLLALD
NPFPMELPENLFGERWAFVQLPFSVVQEEVSNLKATFMFGSSLDLDLLGIEIDNKTMIPGLSVASSRAQPLAAWMNGMEVYSVEADTSRSSLILSVGISTRYVYATYKKT
PVATAEAEAWEAAKKACGGLHFLAIQDDLDSEDCVGFWLLLDLPPPPV