; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009293 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009293
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationscaffold813:114625..116755
RNA-Seq ExpressionMS009293
SyntenyMS009293
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135933.1 nuclear transcription factor Y subunit A-4 isoform X1 [Cucumis sativus]7.8e-14377.59Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV DG KY+LQSTK+SEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK NNV+SNT+ EED +S ANH TK VSEA S YM T+E G+K+T D+Q   SR FM QNMQIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK
        HAFF+GKSN HGLSTY+SQL DVEGGHL QPHESMQVN APQRAIPIK
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK

XP_008461297.1 PREDICTED: nuclear transcription factor Y subunit A-9-like [Cucumis melo]3.5e-14377.59Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV D  KY+LQS+KYSEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK NNV+SNT+ EED NSGANH TK VSE GS YM T E G+K+T D+Q   SR  M QNMQIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK
        HAFF+GKSN HGLSTYNSQL DVEGGHL  PHESMQVN APQRAIPIK
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK

XP_022150009.1 nuclear transcription factor Y subunit A-4-like [Momordica charantia]1.3e-17491.09Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHH RMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNM IT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK
        HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVN APQRAIPIK
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK

XP_023547827.1 nuclear transcription factor Y subunit A-4-like isoform X2 [Cucurbita pepo subsp. pepo]8.1e-14075.79Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQ+ DG KY++QSTKYSE WWHGVGNNT  GED  +T+SADYLN TVSSG TQSQANDENI KEVQHLKYIPFSTSPPVGE LDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTS GPQS  PH YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK NNVISNT  EE  NSG NH TK V+EAGS YM  DENG+KDT +++    + FM QN+QIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPI
         AFF+GK NGHG+STY SQL+DVEGGHL QPHESMQVN APQRAIPI
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPI

XP_038899773.1 nuclear transcription factor Y subunit A-1-like [Benincasa hispida]3.9e-14277.23Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQV DG KY+LQSTKYSEPWWHGVGNNT +GED  +TSSA+YLNVTV+SGATQSQANDENI KEVQHLKYIPFSTSPPVGEHLD NS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTSYGPQS LPH YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVI+SRKPYLHESRHLHAMRRARGSGGRFLNTKK NNVISNT+ EED NS ANH TK VS A   Y   DEN +KDT ++ +E     M  NMQIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPI
        HAFF+GKSN HGLSTYNSQL+DVEGGHL QPHESMQVN APQRAIPI
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPI

TrEMBL top hitse value%identityAlignment
A0A0A0K612 Nuclear transcription factor Y subunit3.8e-14377.59Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV DG KY+LQSTK+SEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK NNV+SNT+ EED +S ANH TK VSEA S YM T+E G+K+T D+Q   SR FM QNMQIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK
        HAFF+GKSN HGLSTY+SQL DVEGGHL QPHESMQVN APQRAIPIK
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK

A0A1S3CED9 Nuclear transcription factor Y subunit1.7e-14377.59Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV D  KY+LQS+KYSEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK NNV+SNT+ EED NSGANH TK VSE GS YM T E G+K+T D+Q   SR  M QNMQIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK
        HAFF+GKSN HGLSTYNSQL DVEGGHL  PHESMQVN APQRAIPIK
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK

A0A5D3CGW1 Nuclear transcription factor Y subunit1.7e-14377.59Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPS+PENVDQQV D  KY+LQS+KYSEPWWHGVGNNT  GED  +TSSA+YLNVTV+SGATQ QANDENI KEVQHLKYIPFSTSPPVGEHLDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTSYGPQ+ LP  YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK NNV+SNT+ EED NSGANH TK VSE GS YM T E G+K+T D+Q   SR  M QNMQIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK
        HAFF+GKSN HGLSTYNSQL DVEGGHL  PHESMQVN APQRAIPIK
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK

A0A6J1D8S0 Nuclear transcription factor Y subunit6.4e-17591.09Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHH RMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNM IT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK
        HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVN APQRAIPIK
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPIK

A0A6J1GNB7 Nuclear transcription factor Y subunit9.6e-13975.5Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        MPSKPENVDQQ+ DG KY++QSTKYS  WW+GVGNNT  GED  +T+SADYLN TVSSG TQSQ NDENI KEVQHLKYIPFS SPPVGE LDLNS MEL
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA
        VGHSI                            VLTSYPFSDAQY QMLTS GPQS  PH YGLHHARMPLPL+MEEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKA

Query:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT
        ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKK NNVISNT  EE  NSGANH TK VSEAGS YMA DENG+KDT +++    + FM QN+QIT
Subjt:  ELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQIT

Query:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPI
         AFF+GK NGHG+STY SQL+DVEGGHL QPHESMQVN APQRAIPI
Subjt:  HAFFDGKSNGHGLSTYNSQLSDVEGGHLGQPHESMQVNRAPQRAIPI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.1e-2551.45Show/hide
Query:  YPFSDAQYGQMLTSYGPQ---SMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFL
        YP+ D  Y + + +  PQ    +     G+    +PLP D  EEPV+VNAKQYHGILRRRQSRA+ E + KVIKSRKPYLHESRHLHA+RR RG GGRFL
Subjt:  YPFSDAQYGQMLTSYGPQ---SMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFL

Query:  NTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMA
        N KK          E++ +  ++H  KS   AG + MA
Subjt:  NTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMA

Q93ZH2 Nuclear transcription factor Y subunit A-36.2e-2651.18Show/hide
Query:  KETEMSNFKYLHL---QVLTSYPFSDAQYGQML-TSYGPQSML--PHFYGLHHARMPLPLDM-EEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKP
        K+  M+ F  +H    Q   S+ ++D  YG +L  +Y PQ+    P    +   R+PLP ++ E +PV+VNAKQYH I+RRRQ RAK E + K+I++RKP
Subjt:  KETEMSNFKYLHL---QVLTSYPFSDAQYGQML-TSYGPQSML--PHFYGLHHARMPLPLDM-EEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKP

Query:  YLHESRHLHAMRRARGSGGRFLNTKKL
        YLHESRH+HA++R RGSGGRFLNTKKL
Subjt:  YLHESRHLHAMRRARGSGGRFLNTKKL

Q945M9 Nuclear transcription factor Y subunit A-91.4e-3035.29Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-
        M SK ++   +V   V   + S+  S  PW        A         S+  + + + S  ++S +N D  + KE Q       +TSP   G++ D N  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-

Query:  -----------HMELVGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHARMPLPLDMEEEPVYVN
                   H +LVGH++  A                           +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP +M +EPV+VN
Subjt:  -----------HMELVGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHARMPLPLDMEEEPVYVN

Query:  AKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHD
        AKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N    H T+S S + S+         +    
Subjt:  AKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHD

Query:  DQQEGS
        D+ + S
Subjt:  DQQEGS

Q9LNP6 Nuclear transcription factor Y subunit A-81.2e-2449.23Show/hide
Query:  SYPFSDAQYGQML-TSYGPQSMLPHFYGLHHARMPLPLDM-EEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFL
        S+ ++D  +G ++  +Y PQ+ +   +     R+PLP D+ E EPV+VNAKQ+H I+RRRQ RAK E + K+IK+RKPYLHESRH+HA++R RGSGGRFL
Subjt:  SYPFSDAQYGQML-TSYGPQSMLPHFYGLHHARMPLPLDM-EEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFL

Query:  NTKKLNNVISNTSTEEDFNSGANHFTKSVS
        NTKKL     +T  ++D      H T ++S
Subjt:  NTKKLNNVISNTSTEEDFNSGANHFTKSVS

Q9LXV5 Nuclear transcription factor Y subunit A-16.0e-2935.25Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        M SKP   +++  +    V Q   Y+EPWW     N + G  P    S    N +       S++ND +   E   L       +    +     +    
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRA
        V +  +     +LS  N++ +  +   + + H       P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRA

Query:  KAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        KAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  KAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A91.0e-3135.29Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-
        M SK ++   +V   V   + S+  S  PW        A         S+  + + + S  ++S +N D  + KE Q       +TSP   G++ D N  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYS-EPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQAN-DENIEKEVQHLKYIPFSTSP-PVGEHLDLNS-

Query:  -----------HMELVGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHARMPLPLDMEEEPVYVN
                   H +LVGH++  A                           +S P+ D  Y  ++ +YG  P   +P + G+ H+RMPLP +M +EPV+VN
Subjt:  -----------HMELVGHSIVRALCLSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYG--PQSMLPHFYGLHHARMPLPLDMEEEPVYVN

Query:  AKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHD
        AKQY  ILRRRQ+RAKAELEKK+IKSRKPYLHESRH HAMRR RG+GGRF   KK N   S    EE  N    H T+S S + S+         +    
Subjt:  AKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHD

Query:  DQQEGS
        D+ + S
Subjt:  DQQEGS

AT5G12840.1 nuclear factor Y, subunit A14.3e-3035.25Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        M SKP   +++  +    V Q   Y+EPWW     N + G  P    S    N +       S++ND +   E   L       +    +     +    
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRA
        V +  +     +LS  N++ +  +   + + H       P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRA

Query:  KAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        KAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  KAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

AT5G12840.2 nuclear factor Y, subunit A19.5e-3036.65Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFST---SPPVGEHLDLNSH
        M SKP   +++  +    V Q   Y+EPWW     N + G  P    S    N +       S++ND +   E   L      T   S         N  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFST---SPPVGEHLDLNSH

Query:  MELVGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQ
        ME  G+        +LS  N++ +  +   + + H       P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR+
Subjt:  MELVGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQ

Query:  SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        +RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

AT5G12840.3 nuclear factor Y, subunit A14.3e-3035.25Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL
        M SKP   +++  +    V Q   Y+EPWW     N + G  P    S    N +       S++ND +   E   L       +    +     +    
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMEL

Query:  VGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRA
        V +  +     +LS  N++ +  +   + + H       P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR++RA
Subjt:  VGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRA

Query:  KAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        KAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  KAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN

AT5G12840.4 nuclear factor Y, subunit A19.5e-3036.65Show/hide
Query:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFST---SPPVGEHLDLNSH
        M SKP   +++  +    V Q   Y+EPWW     N + G  P    S    N +       S++ND +   E   L      T   S         N  
Subjt:  MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFST---SPPVGEHLDLNSH

Query:  MELVGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQ
        ME  G+        +LS  N++ +  +   + + H       P+ D  YG ++ +YG Q +    + G+   R  LPLDM +EPVYVNAKQY GILRRR+
Subjt:  MELVGHSIVRALCLSLSGTNVYKETEMSNFKYL-HLQVLTSYPFSDAQYGQMLTSYGPQSM-LPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQ

Query:  SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN
        +RAKAELE+KVI+ RKPYLHESRH HAMRRAR SGGRF   KK     S     ED          + + +GS  + TD N
Subjt:  SRAKAELEKKVIKSRKPYLHESRHLHAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCGAAACCAGAAAATGTAGACCAACAAGTAACTGATGGGGTGAAGTATGTGCTGCAATCGACCAAATACTCTGAGCCTTGGTGGCATGGAGTTGGGAACAACAC
CGCTGTTGGTGAAGATCCTATCAGAACATCTTCTGCAGACTACCTGAACGTTACTGTTTCCAGTGGAGCAACTCAGTCACAAGCAAATGATGAAAATATTGAGAAAGAAG
TCCAGCATCTCAAGTACATTCCATTTTCTACATCCCCACCGGTGGGTGAACATCTTGATCTAAATTCCCACATGGAACTTGTTGGTCACTCAATCGTAAGAGCTCTCTGT
CTCTCTCTCTCTGGAACCAATGTATACAAAGAAACAGAAATGAGCAACTTCAAGTATCTCCATTTGCAGGTTTTGACATCATATCCTTTTTCAGATGCACAATATGGTCA
AATGCTAACTTCTTATGGACCACAATCAATGTTACCTCATTTTTATGGGCTTCACCATGCTAGGATGCCTTTACCCCTTGACATGGAAGAAGAGCCCGTTTATGTAAATG
CAAAGCAGTATCATGGCATCTTGAGGAGAAGACAATCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATACCTTCATGAATCCAGACACCTC
CACGCTATGAGACGAGCAAGAGGCAGCGGAGGGCGTTTCCTCAATACCAAAAAGCTCAACAATGTTATTTCCAATACATCAACAGAGGAAGACTTCAATTCTGGTGCAAA
CCATTTCACAAAATCTGTAAGTGAGGCTGGATCAAATTACATGGCGACTGATGAAAATGGAGTTAAGGATACGCATGATGATCAGCAGGAGGGCAGCAGAGGGTTCATGA
ATCAAAATATGCAGATAACACACGCTTTCTTTGATGGAAAATCAAATGGCCATGGTTTATCCACTTACAATTCCCAACTCTCCGATGTTGAGGGAGGGCATCTCGGTCAA
CCGCACGAAAGCATGCAGGTGAACAGGGCTCCACAGAGGGCCATCCCCATCAAG
mRNA sequenceShow/hide mRNA sequence
ATGCCATCGAAACCAGAAAATGTAGACCAACAAGTAACTGATGGGGTGAAGTATGTGCTGCAATCGACCAAATACTCTGAGCCTTGGTGGCATGGAGTTGGGAACAACAC
CGCTGTTGGTGAAGATCCTATCAGAACATCTTCTGCAGACTACCTGAACGTTACTGTTTCCAGTGGAGCAACTCAGTCACAAGCAAATGATGAAAATATTGAGAAAGAAG
TCCAGCATCTCAAGTACATTCCATTTTCTACATCCCCACCGGTGGGTGAACATCTTGATCTAAATTCCCACATGGAACTTGTTGGTCACTCAATCGTAAGAGCTCTCTGT
CTCTCTCTCTCTGGAACCAATGTATACAAAGAAACAGAAATGAGCAACTTCAAGTATCTCCATTTGCAGGTTTTGACATCATATCCTTTTTCAGATGCACAATATGGTCA
AATGCTAACTTCTTATGGACCACAATCAATGTTACCTCATTTTTATGGGCTTCACCATGCTAGGATGCCTTTACCCCTTGACATGGAAGAAGAGCCCGTTTATGTAAATG
CAAAGCAGTATCATGGCATCTTGAGGAGAAGACAATCGCGTGCCAAAGCTGAGCTTGAGAAGAAAGTGATAAAAAGTAGAAAGCCATACCTTCATGAATCCAGACACCTC
CACGCTATGAGACGAGCAAGAGGCAGCGGAGGGCGTTTCCTCAATACCAAAAAGCTCAACAATGTTATTTCCAATACATCAACAGAGGAAGACTTCAATTCTGGTGCAAA
CCATTTCACAAAATCTGTAAGTGAGGCTGGATCAAATTACATGGCGACTGATGAAAATGGAGTTAAGGATACGCATGATGATCAGCAGGAGGGCAGCAGAGGGTTCATGA
ATCAAAATATGCAGATAACACACGCTTTCTTTGATGGAAAATCAAATGGCCATGGTTTATCCACTTACAATTCCCAACTCTCCGATGTTGAGGGAGGGCATCTCGGTCAA
CCGCACGAAAGCATGCAGGTGAACAGGGCTCCACAGAGGGCCATCCCCATCAAG
Protein sequenceShow/hide protein sequence
MPSKPENVDQQVTDGVKYVLQSTKYSEPWWHGVGNNTAVGEDPIRTSSADYLNVTVSSGATQSQANDENIEKEVQHLKYIPFSTSPPVGEHLDLNSHMELVGHSIVRALC
LSLSGTNVYKETEMSNFKYLHLQVLTSYPFSDAQYGQMLTSYGPQSMLPHFYGLHHARMPLPLDMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKSRKPYLHESRHL
HAMRRARGSGGRFLNTKKLNNVISNTSTEEDFNSGANHFTKSVSEAGSNYMATDENGVKDTHDDQQEGSRGFMNQNMQITHAFFDGKSNGHGLSTYNSQLSDVEGGHLGQ
PHESMQVNRAPQRAIPIK