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MS009294 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009294
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein FRA10AC1
Genome locationscaffold813:124627..124716
RNA-Seq ExpressionMS009294
SyntenyMS009294
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU36203.1 hypothetical protein TSUD_363580 [Trifolium subterraneum]3.6e-0487.5Show/hide
Query:  GQFICGNKHCDEKDGLASYEASIC
        GQFICGNKHCDEKDGLASYE + C
Subjt:  GQFICGNKHCDEKDGLASYEASIC
KAF7836049.1 protein FRA10AC1 [Senna tora]3.6e-0487.5Show/hide
Query:  GQFICGNKHCDEKDGLASYEASIC
        GQFICGNKHCDEKDGLASYE + C
Subjt:  GQFICGNKHCDEKDGLASYEASIC
PON40746.1 Folate-sensitive fragile site protein Fra10Ac [Trema orientale]8.0e-0491.3Show/hide
Query:  GQFICGNKHCDEKDGLASYEASI
        GQFICGNKHCDEKDGLASYEA +
Subjt:  GQFICGNKHCDEKDGLASYEASI
XP_019186535.1 PREDICTED: protein FRA10AC1 [Ipomoea nil]8.0e-0476.92Show/hide
Query:  GQFICGNKHCDEKDGLASYEASICSI
        GQFICGNKHC+EKDGLASYE + C +
Subjt:  GQFICGNKHCDEKDGLASYEASICSI
XP_028777002.1 protein FRA10AC1-like [Prosopis alba]3.6e-0487.5Show/hide
Query:  GQFICGNKHCDEKDGLASYEASIC
        GQFICGNKHCDEKDGLASYE + C
Subjt:  GQFICGNKHCDEKDGLASYEASIC
TrEMBL top hitse value%identityAlignment
A0A0B0PJ48 Protein FRA10AC13.9e-0491.3Show/hide
Query:  GQFICGNKHCDEKDGLASYEASI
        GQFICGNKHC+EKDGLASYEAS+
Subjt:  GQFICGNKHCDEKDGLASYEASI
A0A2N9HUC2 Uncharacterized protein1.0e-0492Show/hide
Query:  GQFICGNKHCDEKDGLASYEASICS
        GQFICGNKHCDEKDGLASYEAS+ S
Subjt:  GQFICGNKHCDEKDGLASYEASICS
A0A2P5DLN8 Folate-sensitive fragile site protein Fra10Ac3.9e-0491.3Show/hide
Query:  GQFICGNKHCDEKDGLASYEASI
        GQFICGNKHCDEKDGLASYEA +
Subjt:  GQFICGNKHCDEKDGLASYEASI
A0A2P5Y889 Uncharacterized protein3.9e-0491.3Show/hide
Query:  GQFICGNKHCDEKDGLASYEASI
        GQFICGNKHC+EKDGLASYEAS+
Subjt:  GQFICGNKHCDEKDGLASYEASI
A0A2Z6N299 Uncharacterized protein1.7e-0487.5Show/hide
Query:  GQFICGNKHCDEKDGLASYEASIC
        GQFICGNKHCDEKDGLASYE + C
Subjt:  GQFICGNKHCDEKDGLASYEASIC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G15030.1 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink).9.1e-0677.27Show/hide
Query:  GQFICGNKHCDEKDGLASYEAS
        GQF+CG+KHCDEK+GLASYE +
Subjt:  GQFICGNKHCDEKDGLASYEAS
AT4G15030.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink).9.1e-0677.27Show/hide
Query:  GQFICGNKHCDEKDGLASYEAS
        GQF+CG+KHCDEK+GLASYE +
Subjt:  GQFICGNKHCDEKDGLASYEAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAAAAGGATGGTTTAGCAAGCTATGAGGCAAGTATATGTAGCATTCATTTATAT
mRNA sequenceShow/hide mRNA sequence
TCAGGGCAGTTCATATGCGGTAACAAGCATTGTGATGAAAAGGATGGTTTAGCAAGCTATGAGGCAAGTATATGTAGCATTCATTTATAT
Protein sequenceShow/hide protein sequence
SGQFICGNKHCDEKDGLASYEASICSIHLY