CuGenDBv2

Gene ID	MS009295
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein FRA10AC1
Genome location	scaffold813:126115..127835
RNA-Seq Expression	MS009295
Synteny	MS009295
Gene Ontology terms	NA
InterPro domains	IPR019129 - Folate-sensitive fragile site protein Fra10Ac1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7025651.1 Protein FRA10AC1, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.6e-47

96.94

Show/hide

Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

XP_022152761.1 protein FRA10AC1 [Momordica charantia]

4.5e-48

100

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Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

XP_022960519.1 protein FRA10AC1 isoform X1 [Cucurbita moschata]

8.6e-47

96.94

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Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

XP_023004638.1 protein FRA10AC1 isoform X1 [Cucurbita maxima]

8.6e-47

96.94

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Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

XP_023004639.1 protein FRA10AC1 isoform X2 [Cucurbita maxima]

8.6e-47

96.94

Show/hide

Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DIS1 protein FRA10AC1

2.2e-48

100

Show/hide

Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

A0A6J1H9A7 protein FRA10AC1 isoform X2

4.2e-47

96.94

Show/hide

Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

A0A6J1HB92 protein FRA10AC1 isoform X1

4.2e-47

96.94

Show/hide

Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

A0A6J1KWV6 protein FRA10AC1 isoform X2

4.2e-47

96.94

Show/hide

Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

A0A6J1L051 protein FRA10AC1 isoform X1

4.2e-47

96.94

Show/hide

Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        MASFGSLKNAIFEREE+KQQYQAHVRGLNAYDRHKKF+HDYVHFYGKNKSREE FPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

SwissProt top hits

e value

%identity

Alignment

Q5FVF1 Protein FRA10AC1 homolog

1.2e-14

43.33

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Query:  IFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKF--PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        + +REE + + + H+  ++AY RH KF++DY+ +YG  +   ++     KTD D +RE +RF+ +EED+ D +WE++L K+YYDKLFKEY
Subjt:  IFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKF--PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

Q70Z53 Protein FRA10AC1

1.1e-15

45.56

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Query:  IFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKF--PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        + +REE + + + H+  ++AY RH KF++DY+ +YG  K   ++     KTD D +RE +RF+ +EED+MD +WE++L K+YYDKLFKEY
Subjt:  IFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKF--PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

Q8BP78 Protein FRA10AC1 homolog

1.2e-14

43.33

Show/hide

Query:  IFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKF--PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        + +REE + + + H+  ++AY RH KF++DY+ +YG  +   ++     KTD D +RE +RF+ +EED+ D +WE++L K+YYDKLFKEY
Subjt:  IFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKF--PIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

Arabidopsis top hits

e value

%identity

Alignment

AT4G15030.1 CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8455 Blast hits to 5700 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3820; Fungi - 744; Plants - 645; Viruses - 76; Other Eukaryotes - 2900 (source: NCBI BLink).

4.1e-39

74.49

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Query:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY
        M S  ++++ I++REE+KQQYQAH+RGLNAY+RHKKF+ DYV FYGK+K  E K P+KTDQDTLREGYRFIRSEEDD+D SWEQ+LVKRYYDKLFKEY
Subjt:  MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

AT4G15030.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Folate-sensitive fragile site protein Fra10Ac1 (InterPro:IPR019129); Has 8498 Blast hits to 5699 proteins in 376 species: Archae - 6; Bacteria - 264; Metazoa - 3838; Fungi - 743; Plants - 650; Viruses - 76; Other Eukaryotes - 2921 (source: NCBI BLink).

6.6e-37

70.59

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Query:  MASFGSLKNAIFEREEKK----QQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFK
        M S  ++++ I++REE+K    +QYQAH+RGLNAY+RHKKF+ DYV FYGK+K  E K P+KTDQDTLREGYRFIRSEEDD+D SWEQ+LVKRYYDKLFK
Subjt:  MASFGSLKNAIFEREEKK----QQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFK

Query:  EY
        EY
Subjt:  EY

Sequences

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CDS sequence

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ATGGCGTCCTTCGGCTCTCTGAAGAATGCCATCTTCGAAAGAGAAGAGAAAAAACAACAGTACCAGGCTCATGTGCGAGGGCTCAATGCTTACGATCGCCACAAGAAGTT
TATACATGATTACGTTCATTTCTACGGGAAAAATAAATCTAGGGAAGAAAAATTTCCTATTAAGACCGATCAAGACACCTTGAGGGAGGGCTACCGGTTCATTCGTTCTG
AAGAAGATGACATGGATACATCATGGGAGCAAAAGCTGGTGAAGCGATATTATGATAAGCTTTTCAAAGAGTAT

mRNA sequence

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Protein sequence

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MASFGSLKNAIFEREEKKQQYQAHVRGLNAYDRHKKFIHDYVHFYGKNKSREEKFPIKTDQDTLREGYRFIRSEEDDMDTSWEQKLVKRYYDKLFKEY

MS009295 (gene) of Bitter gourd (TR) v1 genome