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MS009308 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009308
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold813:221430..221636
RNA-Seq ExpressionMS009308
SyntenyMS009308
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595145.1 hypothetical protein SDJN03_11698, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1274.29Show/hide
Query:  MAISGPSKMFAVLFLAVAAILFAVASAQES--PAPAPAPQLDRGAAALPAAASMALLCASFFLSLPAILK
        MAISG S +F V+  A+ A+  AVASAQES  P PAPAP LDRGAAALPAAASMALL ASFFLSLPA+LK
Subjt:  MAISGPSKMFAVLFLAVAAILFAVASAQES--PAPAPAPQLDRGAAALPAAASMALLCASFFLSLPAILK
KGN45142.1 hypothetical protein Csa_015584 [Cucumis sativus]6.8e-0666.67Show/hide
Query:  SKMFAVLFLAVAAILFAVASAQESPAPAPAPQLDRGAA-ALPAAASMALLCASFFLSLPAILK
        SK+  V+FLA+ A+  A+ SAQE  APAPAP LDRGAA +LP A SMALL ASFF SLPA+LK
Subjt:  SKMFAVLFLAVAAILFAVASAQESPAPAPAPQLDRGAA-ALPAAASMALLCASFFLSLPAILK
TrEMBL top hitse value%identityAlignment
A0A0A0K9T6 Uncharacterized protein3.3e-0666.67Show/hide
Query:  SKMFAVLFLAVAAILFAVASAQESPAPAPAPQLDRGAA-ALPAAASMALLCASFFLSLPAILK
        SK+  V+FLA+ A+  A+ SAQE  APAPAP LDRGAA +LP A SMALL ASFF SLPA+LK
Subjt:  SKMFAVLFLAVAAILFAVASAQESPAPAPAPQLDRGAA-ALPAAASMALLCASFFLSLPAILK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATCTCCGGCCCTTCCAAGATGTTCGCCGTGCTATTCCTCGCCGTCGCTGCGATCCTCTTCGCCGTCGCCTCCGCACAGGAATCACCGGCGCCGGCTCCGGCTCC
GCAGCTCGACAGAGGAGCGGCGGCTCTGCCTGCCGCCGCCTCCATGGCTCTGCTCTGCGCTTCCTTCTTCCTCTCTCTCCCTGCCATTTTGAAGCCC
mRNA sequenceShow/hide mRNA sequence
ATGGCGATCTCCGGCCCTTCCAAGATGTTCGCCGTGCTATTCCTCGCCGTCGCTGCGATCCTCTTCGCCGTCGCCTCCGCACAGGAATCACCGGCGCCGGCTCCGGCTCC
GCAGCTCGACAGAGGAGCGGCGGCTCTGCCTGCCGCCGCCTCCATGGCTCTGCTCTGCGCTTCCTTCTTCCTCTCTCTCCCTGCCATTTTGAAGCCC
Protein sequenceShow/hide protein sequence
MAISGPSKMFAVLFLAVAAILFAVASAQESPAPAPAPQLDRGAAALPAAASMALLCASFFLSLPAILKP