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MS009344 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009344
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold813:481472..481759
RNA-Seq ExpressionMS009344
SyntenyMS009344
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575656.1 hypothetical protein SDJN03_26295, partial [Cucurbita argyrosperma subsp. sororia]9.7e-1969.47Show/hide
Query:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS
        M MEI  LEG+  TAAVF LVQILVYLILSKSS VFSKNTKRSLSFR VRSL+IRRI+AALSD PSG     P+ES       GEC  MF +GSS
Subjt:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS

XP_022147203.1 uncharacterized protein LOC111016209 [Momordica charantia]7.6e-4097.92Show/hide
Query:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS
        MMTMEIIPLEGI+ATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMF DGSS
Subjt:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS

XP_022954080.1 uncharacterized protein LOC111456452 [Cucurbita moschata]4.3e-1970.53Show/hide
Query:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS
        M MEI  LEG+  TAAVF LVQILVYLILSKSS VFSKNTKRSLSFR VRSLSIRRI+AALSD PSG     P+ES       GEC  MF +GSS
Subjt:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS

XP_022991948.1 uncharacterized protein LOC111488440 [Cucurbita maxima]9.1e-1781.69Show/hide
Query:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSG-GEP
        M MEI  LEG+  TAAVF LVQILVYLILSKSS VFSKNTKRSLSFR VRSLSIRRI+AALSD PSG G+P
Subjt:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSG-GEP

XP_023548863.1 uncharacterized protein LOC111807384 [Cucurbita pepo subsp. pepo]9.7e-1969.47Show/hide
Query:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS
        M MEI  LEG+  TAAVF LVQILVYLILSKSS VFSKNTKRSLSFR VRSL+IRRI+AALSD PSG     P+ES       GEC  MF +GSS
Subjt:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS

TrEMBL top hitse value%identityAlignment
A0A218WLF6 uncharacterized protein LOC1161988358.6e-1363.29Show/hide
Query:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKN-TKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESP
        M  M+   L  +L    +F LVQ LVYLILSKSSDVFSK+  K+SLSFR VRS+SIRR +AALSD+P+GGEPSP   SP
Subjt:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKN-TKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESP

A0A5B7BSX7 Uncharacterized protein (Fragment)1.5e-1258.23Show/hide
Query:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPS
        +M +E   L  IL    +F LVQ LVYL+LSKSS++FSKN  RSLSF+  RS+SIRR+LAAL+D+P+GGEPSP +++ S
Subjt:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPS

A0A6J1D0M4 uncharacterized protein LOC1110162093.7e-4097.92Show/hide
Query:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS
        MMTMEIIPLEGI+ATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMF DGSS
Subjt:  MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS

A0A6J1GRF7 uncharacterized protein LOC1114564522.1e-1970.53Show/hide
Query:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS
        M MEI  LEG+  TAAVF LVQILVYLILSKSS VFSKNTKRSLSFR VRSLSIRRI+AALSD PSG     P+ES       GEC  MF +GSS
Subjt:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS

A0A6J1JXQ0 uncharacterized protein LOC1114884404.4e-1781.69Show/hide
Query:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSG-GEP
        M MEI  LEG+  TAAVF LVQILVYLILSKSS VFSKNTKRSLSFR VRSLSIRRI+AALSD PSG G+P
Subjt:  MTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSG-GEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05575.1 unknown protein7.7e-1461.11Show/hide
Query:  EGILATAAVFFLVQILVYLILSKSSDVF--SKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPS
        EG+L   ++F L+Q LVYLILSKSS VF  SK  KR+ SFR  RS+SIRRILA L D+P+GGE SP    PS
Subjt:  EGILATAAVFFLVQILVYLILSKSSDVF--SKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPS

AT2G31945.1 unknown protein3.0e-1056.16Show/hide
Query:  ILATAAVFFLVQILVYLILSKSSDVF--SKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFS
        +L   A+F LVQ LVYLIL KSS VF  S + KR+ SFR +RS+SIRRILAAL D+P+G + SP +   S  S
Subjt:  ILATAAVFFLVQILVYLILSKSSDVF--SKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACGATGGAGATTATCCCTTTGGAAGGAATTTTAGCGACTGCGGCCGTCTTCTTCCTTGTCCAGATTCTCGTTTATCTCATTCTCTCTAAATCTTCCGACGTCTT
CTCGAAGAACACGAAAAGGTCTCTCAGTTTCAGGCACGTTCGTTCTCTGAGCATTCGTCGGATTTTGGCAGCTCTTTCCGACGTACCGTCCGGCGGCGAGCCGTCTCCTC
CGAATGAAAGTCCGTCGCCATTCTCGATCGGTGGAGAATGCGCGGCGATGTTCAGTGACGGCAGTTCT
mRNA sequenceShow/hide mRNA sequence
ATGATGACGATGGAGATTATCCCTTTGGAAGGAATTTTAGCGACTGCGGCCGTCTTCTTCCTTGTCCAGATTCTCGTTTATCTCATTCTCTCTAAATCTTCCGACGTCTT
CTCGAAGAACACGAAAAGGTCTCTCAGTTTCAGGCACGTTCGTTCTCTGAGCATTCGTCGGATTTTGGCAGCTCTTTCCGACGTACCGTCCGGCGGCGAGCCGTCTCCTC
CGAATGAAAGTCCGTCGCCATTCTCGATCGGTGGAGAATGCGCGGCGATGTTCAGTGACGGCAGTTCT
Protein sequenceShow/hide protein sequence
MMTMEIIPLEGILATAAVFFLVQILVYLILSKSSDVFSKNTKRSLSFRHVRSLSIRRILAALSDVPSGGEPSPPNESPSPFSIGGECAAMFSDGSS