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MS009346 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009346
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOxidoreductase/transition metal ion-binding protein
Genome locationscaffold813:486959..487327
RNA-Seq ExpressionMS009346
SyntenyMS009346
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022151890.1 uncharacterized protein LOC111019747 [Momordica charantia]9.7e-64100Show/hide
Query:  MAVQNNSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLL
        MAVQNNSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLL
Subjt:  MAVQNNSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLL

Query:  VLLLFMISYQSYFQERWFPLLSR
        VLLLFMISYQSYFQERWFPLLSR
Subjt:  VLLLFMISYQSYFQERWFPLLSR

XP_022953918.1 uncharacterized protein LOC111456323 [Cucurbita moschata]2.2e-5281.1Show/hide
Query:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV
        MAV  +S     +SQP+FPLHLCFFFLIL MFL FSW+S YESAV+GVFDQLKLLLI SPLLLLL +HWLSN +NGRLPPL+PLPEKDSLHRAG TPWGV
Subjt:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_022991944.1 uncharacterized protein LOC111488435 [Cucurbita maxima]5.9e-5381.89Show/hide
Query:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV
        MAV  +S     +SQP+FPLHLCFFFLIL MFL FSWYS YESAV+GVFDQLKLLLI SPLLLLL VHWLSN +NGRLPPL+PLPEKDSLHRAG TPWGV
Subjt:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFP+LSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_023548678.1 uncharacterized protein LOC111807266 [Cucurbita pepo subsp. pepo]1.0e-5281.89Show/hide
Query:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV
        MAV  +S     +SQP+FPLHLCFFFLIL MFL FSW+S YESAV+GVFDQLKLLLI SPLLLLL VHWLSN +NGRLPPL+PLPEKDSLHRAG TPWGV
Subjt:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

XP_038898802.1 uncharacterized protein LOC120086305 [Benincasa hispida]2.6e-5388.03Show/hide
Query:  SDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFM
        +  SQP+FPLHLCFFFLILLMFL+FSWYSNYESAV+GVFDQLKLLLI SPLLLLL VHWLSN +NGRLP L+PLPE+DSLHRAG TPWGVGFLLVLLLFM
Subjt:  SDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFM

Query:  ISYQSYFQERWFPLLSR
        ISYQSYFQERWFPLLSR
Subjt:  ISYQSYFQERWFPLLSR

TrEMBL top hitse value%identityAlignment
A0A0A0K9W6 Uncharacterized protein4.6e-5187.72Show/hide
Query:  SQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISY
        SQP+FPLHLCFFFLILLMFL+FSWYSNYESAV+ VFDQLKLLLI SPLLLLL VHWLSN  +G LP L+PLPEKDSLHRAG TPWGVGFLLVLLLFM+SY
Subjt:  SQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISY

Query:  QSYFQERWFPLLSR
        QSYFQERWFPLLSR
Subjt:  QSYFQERWFPLLSR

A0A1S3CE82 uncharacterized protein LOC1034998794.1e-5286.44Show/hide
Query:  NSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLF
        N+  SQP+FPLHLCFFFLILLMFL+FSWYSNYESAV+ VFDQLKLLLI SPLLLLL VHWLSN  NG LP L+PLPEK+SLHRAG TPWGVGFLLVLLLF
Subjt:  NSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLF

Query:  MISYQSYFQERWFPLLSR
        MISYQSYFQERWFPLLSR
Subjt:  MISYQSYFQERWFPLLSR

A0A6J1DCG1 uncharacterized protein LOC1110197474.7e-64100Show/hide
Query:  MAVQNNSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLL
        MAVQNNSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLL
Subjt:  MAVQNNSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLL

Query:  VLLLFMISYQSYFQERWFPLLSR
        VLLLFMISYQSYFQERWFPLLSR
Subjt:  VLLLFMISYQSYFQERWFPLLSR

A0A6J1GPN5 uncharacterized protein LOC1114563231.1e-5281.1Show/hide
Query:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV
        MAV  +S     +SQP+FPLHLCFFFLIL MFL FSW+S YESAV+GVFDQLKLLLI SPLLLLL +HWLSN +NGRLPPL+PLPEKDSLHRAG TPWGV
Subjt:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFPLLSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

A0A6J1JW83 uncharacterized protein LOC1114884352.9e-5381.89Show/hide
Query:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV
        MAV  +S     +SQP+FPLHLCFFFLIL MFL FSWYS YESAV+GVFDQLKLLLI SPLLLLL VHWLSN +NGRLPPL+PLPEKDSLHRAG TPWGV
Subjt:  MAVQNNS----DESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGV

Query:  GFLLVLLLFMISYQSYFQERWFPLLSR
        GF+LV+LLFMISYQSYFQERWFP+LSR
Subjt:  GFLLVLLLFMISYQSYFQERWFPLLSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein3.0e-1033.33Show/hide
Query:  PLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHR-----------AGATPWGVGFLLVLL
        P  +     +  +FL  SWY + E A +   +Q+   L+  PL L++ V WLS+ +N    P   L    S  R            G++PWGV  L+VLL
Subjt:  PLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHR-----------AGATPWGVGFLLVLL

Query:  LFMISYQSYFQERW
        L ++ YQS F E W
Subjt:  LFMISYQSYFQERW

AT2G31940.1 unknown protein2.9e-3461.4Show/hide
Query:  ESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNAD--NGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFM
        E  P  PLHLC F LILLMF+T SWY++YE  ++G   Q KL L+ASPLLLLLAVH+LS+     G +  L+ L E++SL+RAG TPWGV F+LV L FM
Subjt:  ESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNAD--NGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFM

Query:  ISYQSYFQERWFPL
        +SYQS FQERWFPL
Subjt:  ISYQSYFQERWFPL

AT3G06890.1 unknown protein3.7e-0528.74Show/hide
Query:  LLMFLTFSWYSNYESAVDGVFDQLKLL-LIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQ
        L++ + F    + E+  D + + L  + L+  P++LLL + +LS+     +  +    E +S+HR   +P GV   LVL+LF++ Y+
Subjt:  LLMFLTFSWYSNYESAVDGVFDQLKLL-LIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQ

AT5G19875.1 unknown protein3.1e-2855.34Show/hide
Query:  HLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQSYFQER
        HLCF F+++   L+F+WY N+ES ++   D LKL+ I +PL LLL VH+ S    G L   +P PE+DS+HRAG++PWGV  +LVL+LFM+SYQS FQER
Subjt:  HLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQSYFQER

Query:  WFP
        WFP
Subjt:  WFP

AT5G42146.1 unknown protein6.8e-0732.11Show/hide
Query:  PLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADN--GRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQSY
        PL L     I+ + L  S Y  Y+  V+     LKL ++  P+L +  +  LS       +    +   +  SL   G  PWGV  +L+LLL ++S QSY
Subjt:  PLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADN--GRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQSY

Query:  FQERWFPLL
        F   W+P L
Subjt:  FQERWFPLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTCAGAATAATTCCGATGAGTCTCAGCCCAGTTTCCCCCTCCATCTCTGCTTCTTCTTCCTTATCCTGCTCATGTTCTTAACCTTCTCTTGGTACTCCAACTA
CGAGTCCGCCGTCGACGGCGTCTTCGATCAGCTCAAGCTCCTCCTCATCGCCTCCCCGCTCCTCCTCCTCCTCGCCGTCCACTGGCTCTCCAACGCAGACAACGGCCGCC
TCCCGCCGCTCCTCCCGCTGCCGGAGAAAGACTCGCTCCACCGCGCCGGAGCCACCCCGTGGGGCGTTGGGTTTTTGCTCGTGCTTCTCCTTTTCATGATCTCTTATCAG
TCTTACTTCCAAGAACGCTGGTTCCCTCTCTTGAGCCGG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTCAGAATAATTCCGATGAGTCTCAGCCCAGTTTCCCCCTCCATCTCTGCTTCTTCTTCCTTATCCTGCTCATGTTCTTAACCTTCTCTTGGTACTCCAACTA
CGAGTCCGCCGTCGACGGCGTCTTCGATCAGCTCAAGCTCCTCCTCATCGCCTCCCCGCTCCTCCTCCTCCTCGCCGTCCACTGGCTCTCCAACGCAGACAACGGCCGCC
TCCCGCCGCTCCTCCCGCTGCCGGAGAAAGACTCGCTCCACCGCGCCGGAGCCACCCCGTGGGGCGTTGGGTTTTTGCTCGTGCTTCTCCTTTTCATGATCTCTTATCAG
TCTTACTTCCAAGAACGCTGGTTCCCTCTCTTGAGCCGG
Protein sequenceShow/hide protein sequence
MAVQNNSDESQPSFPLHLCFFFLILLMFLTFSWYSNYESAVDGVFDQLKLLLIASPLLLLLAVHWLSNADNGRLPPLLPLPEKDSLHRAGATPWGVGFLLVLLLFMISYQ
SYFQERWFPLLSR