; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009351 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009351
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein UPSTREAM OF FLC isoform X1
Genome locationscaffold813:519376..522159
RNA-Seq ExpressionMS009351
SyntenyMS009351
Gene Ontology termsGO:0051258 - protein polymerization (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR010369 - Protein SOSEKI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461226.1 PREDICTED: protein UPSTREAM OF FLC isoform X1 [Cucumis melo]7.5e-11770.35Show/hide
Query:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY
        MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEY
Subjt:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY

Query:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S
        VLQGSQII   TLF   +  +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG+     V+EIEGF  QY  S
Subjt:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S

Query:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA
        SLY KL   K+EK  +KD M KEGG TATSTVSSSS        PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Subjt:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA

Query:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT  +K M GPNCS
Subjt:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

XP_008461228.1 PREDICTED: protein UPSTREAM OF FLC isoform X3 [Cucumis melo]7.5e-11770.35Show/hide
Query:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY
        MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEY
Subjt:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY

Query:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S
        VLQGSQII   TLF   +  +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG+     V+EIEGF  QY  S
Subjt:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S

Query:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA
        SLY KL   K+EK  +KD M KEGG TATSTVSSSS        PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Subjt:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA

Query:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT  +K M GPNCS
Subjt:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

XP_022144952.1 protein UPSTREAM OF FLC isoform X1 [Momordica charantia]2.2e-18593.68Show/hide
Query:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
        MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
Subjt:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV

Query:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS
        LQGSQIIQFP LF N             ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLETAKQG+GVEEIEGFNNQYSS
Subjt:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS

Query:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
        LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Subjt:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD

Query:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
Subjt:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

XP_022144961.1 protein UPSTREAM OF FLC isoform X2 [Momordica charantia]2.2e-18593.68Show/hide
Query:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
        MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
Subjt:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV

Query:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS
        LQGSQIIQFP LF N             ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLETAKQG+GVEEIEGFNNQYSS
Subjt:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS

Query:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
        LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Subjt:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD

Query:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
Subjt:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

XP_038899908.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120087098 [Benincasa hispida]5.9e-12270.53Show/hide
Query:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVL
        MEA NKGGEIR+VHI+YFLSRMGHVEQPHLIRVHHL        GV+LRDVKRWLGELRGK+MPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEYVL
Subjt:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVL

Query:  QGSQIIQFPTL-----FRNFS----------TPTLFRSDELEPTQDFPAK-LQMN-GESPPCDSERSTVTDDGDFIKVEEETKNFLET-AKQGM--GVEE
        QGSQII FP L     F NFS            +LFR +ELE  +DF +K LQ N  ESPPCDSERSTVTDDGD +KVEEET   LET  KQG+   + E
Subjt:  QGSQIIQFPTL-----FRNFS----------TPTLFRSDELEPTQDFPAK-LQMN-GESPPCDSERSTVTDDGDFIKVEEETKNFLET-AKQGM--GVEE

Query:  IEGFNNQYSSLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPN
        IEGF  QYSSLY KL    +EK  EKD MEKEGGPTATSTV+SSS        PAFTKSKSYSSGASHVLRQWITC  GAVDTND VL+KNRS  KDPPN
Subjt:  IEGFNNQYSSLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPN

Query:  L--PEKPKNDAVICRDDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNC
           P K KNDAV CRDDVLGGSARV+ +S +G L+I R  + Q SRKSFD+ RKKRPKESG RKV AATA +K M GPNC
Subjt:  L--PEKPKNDAVICRDDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNC

TrEMBL top hitse value%identityAlignment
A0A1S3CE79 protein UPSTREAM OF FLC isoform X13.6e-11770.35Show/hide
Query:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY
        MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEY
Subjt:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY

Query:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S
        VLQGSQII   TLF   +  +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG+     V+EIEGF  QY  S
Subjt:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S

Query:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA
        SLY KL   K+EK  +KD M KEGG TATSTVSSSS        PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Subjt:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA

Query:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT  +K M GPNCS
Subjt:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

A0A1S3CE85 uncharacterized protein LOC103499876 isoform X21.4e-11369.57Show/hide
Query:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY
        MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEY
Subjt:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY

Query:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S
        VLQGSQII   TLF   +  +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG+     V+EIEGF  QY  S
Subjt:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S

Query:  SLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVIC
        SLY KL   K  EKDK +   G  ATSTVSSSS        PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDAV+C
Subjt:  SLYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVIC

Query:  RDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        RD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT  +K M GPNCS
Subjt:  RDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

A0A1S3CEM9 protein UPSTREAM OF FLC isoform X33.6e-11770.35Show/hide
Query:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY
        MEA  NN+GGEIR+VHI+YFLSRMGHVEQPHLIRVHHLA A+    GV+LRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITP SDNEY
Subjt:  MEA--NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEY

Query:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S
        VLQGSQII   TLF   +  +LFR +ELE ++DF +KLQ     +SPP DSERSTVTDDGD +KVEEE TKN     KQG+     V+EIEGF  QY  S
Subjt:  VLQGSQIIQFPTLFRNFSTPTLFRSDELEPTQDFPAKLQMNG--ESPPCDSERSTVTDDGDFIKVEEE-TKNFLETAKQGM----GVEEIEGFNNQY--S

Query:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA
        SLY KL   K+EK  +KD M KEGG TATSTVSSSS        PAFTKSKSYSSGASHV RQ ITC  GAVDTNDTVL+KNRS  KDPP   EKPKNDA
Subjt:  SLYEKL---KEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITC--GAVDTNDTVLIKNRSAAKDPPNLPEKPKNDA

Query:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        V+CRD+VLGGSARV+ SSWD G L+I R    Q SR S D+LRKKRPKE+G  KV AAT  +K M GPNCS
Subjt:  VICRDDVLGGSARVLRSSWD-GQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

A0A6J1CUY7 protein UPSTREAM OF FLC isoform X21.1e-18593.68Show/hide
Query:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
        MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
Subjt:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV

Query:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS
        LQGSQIIQFP LF N             ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLETAKQG+GVEEIEGFNNQYSS
Subjt:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS

Query:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
        LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Subjt:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD

Query:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
Subjt:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

A0A6J1CV58 protein UPSTREAM OF FLC isoform X11.1e-18593.68Show/hide
Query:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
        MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV
Subjt:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAA-ATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYV

Query:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS
        LQGSQIIQFP LF N             ++FRSDELEPT+DFPAKLQMNGESP CDSERSTVTDDGD IKVEEETKNFLETAKQG+GVEEIEGFNNQYSS
Subjt:  LQGSQIIQFPTLFRNFSTP---------TLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSS

Query:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
        LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD
Subjt:  LYEKLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDD

Query:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
        +LGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS
Subjt:  VLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKESGGRKVAAATAAFKAMGGPNCS

SwissProt top hitse value%identityAlignment
A0A2R6X6S3 Protein SOSEKI2.0e-1626.74Show/hide
Query:  RVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTL
        +V ++Y+LSR G ++QPHLI V      +T   G++LRDVKR L  +RGK M ++FSWS KR YK  ++WQDL DDD I P SD E VL+GS+      L
Subjt:  RVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPTL

Query:  FRNFSTPTLFRSDELEP--TQDFPAKL-QMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYS-SLYEKLKEEKYIEKDKME
        +  F     F   + +P      P K+ ++  +    ++ + ++  + D ++ + +    L  + Q M    ++ F+   S  L +++       K    
Subjt:  FRNFSTPTLFRSDELEP--TQDFPAKL-QMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYS-SLYEKLKEEKYIEKDKME

Query:  KEGG-PTATSTVSSSSSSSSSSTHPAFT-------KSKSYSSGASHVLRQWITCGAVDTNDTV---------LIKNRSAAKD-PPNLP-EKPKNDAVICR
        +E     + + +SS +  S  ST   F+       +SKS +S +S    +  + G     +++         L ++R  +++ PP +P E P+  +    
Subjt:  KEGG-PTATSTVSSSSSSSSSSTHPAFT-------KSKSYSSGASHVLRQWITCGAVDTNDTV---------LIKNRSAAKD-PPNLP-EKPKNDAVICR

Query:  DDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKE
         ++   + R L+   +   ++ R   ++ SR    EL ++ P+E
Subjt:  DDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRPKE

Q8GY65 Protein SOSEKI 43.7e-1836.77Show/hide
Query:  NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGS
        ++K    R V ++Y+LSR G ++ PH I V       ++  G++L+DV   L +LRG  M   +SWS KR YK G+VW DL D+D I P    EYVL+GS
Subjt:  NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGS

Query:  QIIQFPTLFRNFSTPTLFRSDELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD
        QI+       NFS  T  R+        +      ++N E+      + ST TDD
Subjt:  QIIQFPTLFRNFSTPTLFRSDELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD

Q8GYT8 Protein SOSEKI 33.1e-1744.33Show/hide
Query:  EIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQI
        +I++V I+Y+LS+   +E PH + V       ++  G++LRDV   L  LRG+ M   +SWS KR Y+ G+VW DL +DDLI P + NEYVL+GS++
Subjt:  EIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQI

Q9FJF5 Protein SOSEKI 51.2e-1327.53Show/hide
Query:  RRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPT
        R+V ++Y+L R G ++ PH I V       ++  G++L+DV   L +LRGK M   +SWS KR YK G+VW DL +DD I P    EYVL+GS+++    
Subjt:  RRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPT

Query:  LF--RNFSTPTLFRSD-ELEPTQ----DFPAKLQMNGESPPCDSERS---------TVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYEK
        +   R+    + FR    L P +    D PA +           + S         +  +    +  +  T+      ++    EEIE   +  S  YE 
Subjt:  LF--RNFSTPTLFRSD-ELEPTQ----DFPAKLQMNGESPPCDSERS---------TVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYEK

Query:  LKEEKYIEKDKMEKEGGPTATSTVSS---------SSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTND--TVLIKNRSAA
           E  + +D++      ++  T+ +            S SS+ H       S    AS VL Q I+CG +   +   VL+K++  A
Subjt:  LKEEKYIEKDKMEKEGGPTATSTVSS---------SSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTND--TVLIKNRSAA

Q9SYJ8 Protein SOSEKI 18.8e-4442.96Show/hide
Query:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVL
        ME+N  GGE+RRV+++YFLSR GHV+ PHL+RVHHL+       GVFLRDVK+WL + RG  MP+AFSWS KR+YK GYVWQDL+DDDLITP SDNEYVL
Subjt:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVL

Query:  QGSQII------QFPTLFRNFSTPTLFRSDELEPTQDFP-AKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYE
        +GS+I+       +P + +          D  E  Q       ++  ESP   S+RST T        EE T N              EGF         
Subjt:  QGSQII------QFPTLFRNFSTPTLFRSDELEPTQDFP-AKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYE

Query:  KLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSS-GASHVLRQWITCGAVDTNDTVLI---KNRSAAKDP
        K ++ K +   +       +     S   S SS+++  ++ K+KSYSS  ASHVLR  + CG +DTND VL+   K+RS A  P
Subjt:  KLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSS-GASHVLRQWITCGAVDTNDTVLI---KNRSAAKDP

Arabidopsis top hitse value%identityAlignment
AT1G05577.1 Domain of unknown function (DUF966)6.2e-4542.96Show/hide
Query:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVL
        ME+N  GGE+RRV+++YFLSR GHV+ PHL+RVHHL+       GVFLRDVK+WL + RG  MP+AFSWS KR+YK GYVWQDL+DDDLITP SDNEYVL
Subjt:  MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVL

Query:  QGSQII------QFPTLFRNFSTPTLFRSDELEPTQDFP-AKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYE
        +GS+I+       +P + +          D  E  Q       ++  ESP   S+RST T        EE T N              EGF         
Subjt:  QGSQII------QFPTLFRNFSTPTLFRSDELEPTQDFP-AKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYE

Query:  KLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSS-GASHVLRQWITCGAVDTNDTVLI---KNRSAAKDP
        K ++ K +   +       +     S   S SS+++  ++ K+KSYSS  ASHVLR  + CG +DTND VL+   K+RS A  P
Subjt:  KLKEEKYIEKDKMEKEGGPTATSTVSSSSSSSSSSTHPAFTKSKSYSS-GASHVLRQWITCGAVDTNDTVLI---KNRSAAKDP

AT2G28150.1 Domain of unknown function (DUF966)2.2e-1844.33Show/hide
Query:  EIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQI
        +I++V I+Y+LS+   +E PH + V       ++  G++LRDV   L  LRG+ M   +SWS KR Y+ G+VW DL +DDLI P + NEYVL+GS++
Subjt:  EIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQI

AT3G46110.1 Domain of unknown function (DUF966)2.6e-1936.77Show/hide
Query:  NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGS
        ++K    R V ++Y+LSR G ++ PH I V       ++  G++L+DV   L +LRG  M   +SWS KR YK G+VW DL D+D I P    EYVL+GS
Subjt:  NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGS

Query:  QIIQFPTLFRNFSTPTLFRSDELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD
        QI+       NFS  T  R+        +      ++N E+      + ST TDD
Subjt:  QIIQFPTLFRNFSTPTLFRSDELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD

AT3G46110.2 Domain of unknown function (DUF966)2.6e-1936.77Show/hide
Query:  NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGS
        ++K    R V ++Y+LSR G ++ PH I V       ++  G++L+DV   L +LRG  M   +SWS KR YK G+VW DL D+D I P    EYVL+GS
Subjt:  NNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGS

Query:  QIIQFPTLFRNFSTPTLFRSDELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD
        QI+       NFS  T  R+        +      ++N E+      + ST TDD
Subjt:  QIIQFPTLFRNFSTPTLFRSDELEPTQDFPA--KLQMNGESP-PCDSERSTVTDD

AT5G59790.1 Domain of unknown function (DUF966)8.8e-1527.53Show/hide
Query:  RRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPT
        R+V ++Y+L R G ++ PH I V       ++  G++L+DV   L +LRGK M   +SWS KR YK G+VW DL +DD I P    EYVL+GS+++    
Subjt:  RRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPT

Query:  LF--RNFSTPTLFRSD-ELEPTQ----DFPAKLQMNGESPPCDSERS---------TVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYEK
        +   R+    + FR    L P +    D PA +           + S         +  +    +  +  T+      ++    EEIE   +  S  YE 
Subjt:  LF--RNFSTPTLFRSD-ELEPTQ----DFPAKLQMNGESPPCDSERS---------TVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYEK

Query:  LKEEKYIEKDKMEKEGGPTATSTVSS---------SSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTND--TVLIKNRSAA
           E  + +D++      ++  T+ +            S SS+ H       S    AS VL Q I+CG +   +   VL+K++  A
Subjt:  LKEEKYIEKDKMEKEGGPTATSTVSS---------SSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTND--TVLIKNRSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCTAATAATAAAGGTGGGGAAATTAGAAGAGTTCATATTCTTTACTTTCTTAGCCGGATGGGACACGTGGAGCAACCTCATCTCATCCGTGTTCATCATCTCGC
CGCCGCCGCCACCGCCGTCGCCGGCGTTTTCCTCCGAGATGTAAAGAGGTGGCTAGGGGAATTGAGAGGGAAGGAGATGCCAGAAGCCTTCTCATGGTCATACAAAAGAA
AGTACAAAACAGGCTACGTTTGGCAAGACCTGGTGGATGACGATCTCATAACTCCATTTTCTGACAACGAATATGTCCTCCAAGGATCTCAAATAATTCAATTTCCCACT
CTATTTCGTAATTTCTCCACTCCCACTCTGTTCAGATCAGATGAATTGGAACCCACTCAAGATTTTCCGGCCAAACTGCAAATGAATGGAGAATCGCCGCCGTGCGATTC
GGAGAGATCGACGGTCACAGACGACGGTGATTTCATCAAGGTTGAAGAAGAAACCAAGAATTTTTTGGAGACAGCAAAACAGGGAATGGGAGTAGAAGAAATTGAGGGAT
TCAACAACCAATATTCTTCGTTATATGAGAAATTGAAGGAGGAGAAATATATAGAGAAAGACAAAATGGAGAAAGAAGGTGGACCCACTGCCACGTCAACAGTTTCATCA
TCGTCGTCATCATCATCTTCATCTACTCATCCTGCTTTCACGAAGAGCAAGAGCTACTCGAGCGGAGCTTCCCACGTGCTTCGCCAATGGATCACGTGCGGCGCCGTGGA
TACGAACGACACCGTTTTGATCAAGAACCGATCTGCCGCCAAAGATCCACCGAATCTGCCGGAGAAACCCAAAAACGACGCCGTTATTTGCAGAGACGACGTGTTGGGCG
GCTCTGCCCGAGTTCTCCGAAGTTCTTGGGACGGGCAGCTCGATATCCACCGCCACAACAACCAACAAAACTCTCGGAAAAGCTTCGATGAATTAAGGAAGAAGAGGCCG
AAGGAAAGCGGCGGGAGAAAGGTGGCGGCGGCGACGGCGGCTTTCAAGGCGATGGGCGGACCGAACTGCTCG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGCTAATAATAAAGGTGGGGAAATTAGAAGAGTTCATATTCTTTACTTTCTTAGCCGGATGGGACACGTGGAGCAACCTCATCTCATCCGTGTTCATCATCTCGC
CGCCGCCGCCACCGCCGTCGCCGGCGTTTTCCTCCGAGATGTAAAGAGGTGGCTAGGGGAATTGAGAGGGAAGGAGATGCCAGAAGCCTTCTCATGGTCATACAAAAGAA
AGTACAAAACAGGCTACGTTTGGCAAGACCTGGTGGATGACGATCTCATAACTCCATTTTCTGACAACGAATATGTCCTCCAAGGATCTCAAATAATTCAATTTCCCACT
CTATTTCGTAATTTCTCCACTCCCACTCTGTTCAGATCAGATGAATTGGAACCCACTCAAGATTTTCCGGCCAAACTGCAAATGAATGGAGAATCGCCGCCGTGCGATTC
GGAGAGATCGACGGTCACAGACGACGGTGATTTCATCAAGGTTGAAGAAGAAACCAAGAATTTTTTGGAGACAGCAAAACAGGGAATGGGAGTAGAAGAAATTGAGGGAT
TCAACAACCAATATTCTTCGTTATATGAGAAATTGAAGGAGGAGAAATATATAGAGAAAGACAAAATGGAGAAAGAAGGTGGACCCACTGCCACGTCAACAGTTTCATCA
TCGTCGTCATCATCATCTTCATCTACTCATCCTGCTTTCACGAAGAGCAAGAGCTACTCGAGCGGAGCTTCCCACGTGCTTCGCCAATGGATCACGTGCGGCGCCGTGGA
TACGAACGACACCGTTTTGATCAAGAACCGATCTGCCGCCAAAGATCCACCGAATCTGCCGGAGAAACCCAAAAACGACGCCGTTATTTGCAGAGACGACGTGTTGGGCG
GCTCTGCCCGAGTTCTCCGAAGTTCTTGGGACGGGCAGCTCGATATCCACCGCCACAACAACCAACAAAACTCTCGGAAAAGCTTCGATGAATTAAGGAAGAAGAGGCCG
AAGGAAAGCGGCGGGAGAAAGGTGGCGGCGGCGACGGCGGCTTTCAAGGCGATGGGCGGACCGAACTGCTCG
Protein sequenceShow/hide protein sequence
MEANNKGGEIRRVHILYFLSRMGHVEQPHLIRVHHLAAAATAVAGVFLRDVKRWLGELRGKEMPEAFSWSYKRKYKTGYVWQDLVDDDLITPFSDNEYVLQGSQIIQFPT
LFRNFSTPTLFRSDELEPTQDFPAKLQMNGESPPCDSERSTVTDDGDFIKVEEETKNFLETAKQGMGVEEIEGFNNQYSSLYEKLKEEKYIEKDKMEKEGGPTATSTVSS
SSSSSSSSTHPAFTKSKSYSSGASHVLRQWITCGAVDTNDTVLIKNRSAAKDPPNLPEKPKNDAVICRDDVLGGSARVLRSSWDGQLDIHRHNNQQNSRKSFDELRKKRP
KESGGRKVAAATAAFKAMGGPNCS