; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009357 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009357
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRING/U-box superfamily protein
Genome locationscaffold813:584785..585849
RNA-Seq ExpressionMS009357
SyntenyMS009357
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR002867 - IBR domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR031127 - E3 ubiquitin ligase RBR family
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058684.1 putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa]2.0e-6158.73Show/hide
Query:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM
        ++LCEICLE K   NMF I+ CLHSFCR CVIKHV+ KI  G S VSC +L+CS  ++F +CW MLP   AEKW++ALCE ++ E +KV+CPFKDCS  M
Subjt:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM

Query:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
        +     R A I + ECP+CHRLFC  CRVPWH  VTCE+Y+R  K +  GR  D+ L+K LA +M+WM+CP+C+FFVEK  GCLHITCR
Subjt:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

KAE7999764.1 hypothetical protein FH972_004165 [Carpinus fangiana]2.1e-5854.46Show/hide
Query:  NPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEAD
        +P+   +    SSR  CEIC+ERK  D MF  E C+HSFC  C+IKHVA KI  G + VSCP L+C   +EF+ C  MLPK V E+WD  LC ALF    
Subjt:  NPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEAD

Query:  KVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHIT
           CPFKDCSA +VN + G    I ESECP CHRLFCA+C+VPWH  V CEE+Q  ++S+K GR  DD +L++LA + +W RCP C++FVE+T GCLH+T
Subjt:  KVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHIT

Query:  CR
        CR
Subjt:  CR

TQD82863.1 hypothetical protein C1H46_031575 [Malus baccata]2.3e-5753Show/hide
Query:  SRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKV
        S +S +   S++ LC IC+E K  D MF  E C+HSFC  C+ KHVA+KI      VSCP LDC   +E + C  MLPK V E+W+ ALCEA+ + A ++
Subjt:  SRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKV

Query:  MCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
         CPF DCS  ++   +G  A + ESECPICHRLFCA+C VPWH  V CEEY+R N+  +RGR   D ++K+LA++ +W RCPRCK++VEKT GCLHITCR
Subjt:  MCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

TYK10490.1 putative E3 ubiquitin-protein ligase RNF217 [Cucumis melo var. makuwa]5.8e-6158.2Show/hide
Query:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM
        ++LCEICLE K   NMF I+ CLHSFCR CVIKHV+ KI  G S VSC +L+CS  ++F +CW MLP   AEKW++ALCE ++ E +KV+CPFKDCS  M
Subjt:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM

Query:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
        +     R A I + ECP+CHRLFC  CRVPWH  VTCE+Y+R  K ++ GR  D+ L+K LA +M+WM+CP+C+ FVEK  GCLHITCR
Subjt:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

XP_022146079.1 probable E3 ubiquitin-protein ligase RNF217 [Momordica charantia]8.0e-11997.6Show/hide
Query:  LTAPPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA
        LT PPENPSRKSKN SRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA
Subjt:  LTAPPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA

Query:  LFVEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTY
        LFVEA+KVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQ KSKKRGREDDDALLKD+ARKMEWMRCPRCKFFVEKTY
Subjt:  LFVEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTY

Query:  GCLHITCR
        GCLHITCR
Subjt:  GCLHITCR

TrEMBL top hitse value%identityAlignment
A0A0A0K9X9 Uncharacterized protein1.1e-6259.26Show/hide
Query:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM
        ++LCEICLE K   NMF I  CLHSFCR CVIKHV+ KI  G S VSC +L+C   ++F +CW MLPK + EKW++ALCE L+   +KV+CPFKDCS   
Subjt:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM

Query:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
        + LE+G  A I + ECP+CHRLFCA C VPWH  VTCEEY+R  K+++ GR  ++ L+K LA +M+WM+CP+C FFVEK YGCLHITCR
Subjt:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

A0A5A7UU31 Putative E3 ubiquitin-protein ligase RNF2179.7e-6258.73Show/hide
Query:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM
        ++LCEICLE K   NMF I+ CLHSFCR CVIKHV+ KI  G S VSC +L+CS  ++F +CW MLP   AEKW++ALCE ++ E +KV+CPFKDCS  M
Subjt:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM

Query:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
        +     R A I + ECP+CHRLFC  CRVPWH  VTCE+Y+R  K +  GR  D+ L+K LA +M+WM+CP+C+FFVEK  GCLHITCR
Subjt:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

A0A5D3CGK1 Putative E3 ubiquitin-protein ligase RNF2172.8e-6158.2Show/hide
Query:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM
        ++LCEICLE K   NMF I+ CLHSFCR CVIKHV+ KI  G S VSC +L+CS  ++F +CW MLP   AEKW++ALCE ++ E +KV+CPFKDCS  M
Subjt:  RQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAM

Query:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
        +     R A I + ECP+CHRLFC  CRVPWH  VTCE+Y+R  K ++ GR  D+ L+K LA +M+WM+CP+C+ FVEK  GCLHITCR
Subjt:  VNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

A0A5N6QN02 Uncharacterized protein1.0e-5854.46Show/hide
Query:  NPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEAD
        +P+   +    SSR  CEIC+ERK  D MF  E C+HSFC  C+IKHVA KI  G + VSCP L+C   +EF+ C  MLPK V E+WD  LC ALF    
Subjt:  NPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEAD

Query:  KVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHIT
           CPFKDCSA +VN + G    I ESECP CHRLFCA+C+VPWH  V CEE+Q  ++S+K GR  DD +L++LA + +W RCP C++FVE+T GCLH+T
Subjt:  KVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHIT

Query:  CR
        CR
Subjt:  CR

A0A6J1CX43 probable E3 ubiquitin-protein ligase RNF2173.9e-11997.6Show/hide
Query:  LTAPPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA
        LT PPENPSRKSKN SRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA
Subjt:  LTAPPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA

Query:  LFVEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTY
        LFVEA+KVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQ KSKKRGREDDDALLKD+ARKMEWMRCPRCKFFVEKTY
Subjt:  LFVEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTY

Query:  GCLHITCR
        GCLHITCR
Subjt:  GCLHITCR

SwissProt top hitse value%identityAlignment
D3YYI7 Probable E3 ubiquitin-protein ligase RNF2172.8e-1827.41Show/hide
Query:  LCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMVN
        +C +CLE K I     +  C  + C +C+  ++++++  G   + CP  +C  F+E  T    L    + K+ +   E   +++    CP   C      
Subjt:  LCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMVN

Query:  LEKG------RSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEW-----MRCPRCKFFVEKTYGCLHITC
         +KG      RS    + +CP C  ++C KC  PWH  V C+EY++            D LL+  A ++E       +CP+CK  +++T GC H+TC
Subjt:  LEKG------RSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEW-----MRCPRCKFFVEKTYGCLHITC

F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic5.4e-1728.5Show/hide
Query:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKI-NGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKV--MCPFKDCSAAM
        C ICL    +D+ +++E C H FC+ C+++   A + N  +  + C  +DC   +       +L +   ++   A   +    +D     C   DC +  
Subjt:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKI-NGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKV--MCPFKDCSAAM

Query:  VNLEKGRSADILESE----CPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
              R A   ES     C  CH   C +C + +H  +TCE Y       K+ +E+ D  LKD A+      CP CK  +EKT GC H+ CR
Subjt:  VNLEKGRSADILESE----CPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

P0CE10 ATP-dependent RNA helicase DEAH11, chloroplastic1.8e-1729.02Show/hide
Query:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKI-NGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVM--CPFKDCSAAM
        C ICL    +D+ +++E C H FC+ C+++   A + N  +  + C  +DC   +       +L +   ++   A   A    +D  +  C   DC +  
Subjt:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKI-NGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVM--CPFKDCSAAM

Query:  VNLEKGRSADILESE----CPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
              R A   ES     C  CH   C +C + +H  +TCE Y       K+ +E+ D  LKD A+  +   CP CK  +EKT GC H+ CR
Subjt:  VNLEKGRSADILESE----CPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

Q4KLT0 Probable E3 ubiquitin-protein ligase RNF2178.3e-1825.77Show/hide
Query:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCP----FKDCSAA
        C +CLE ++I     +  C    C +C+ +++++++  G + + CP  +C++ ++  T    LP     K+ +   E   +++    CP    F      
Subjt:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCP----FKDCSAA

Query:  MVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEW-----MRCPRCKFFVEKTYGCLHITC
               +S + L+ +CP C  ++C +C  PWH  V C EY++            D LL+  A ++E       +CPRCK  +++T GC H+TC
Subjt:  MVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEW-----MRCPRCKFFVEKTYGCLHITC

Q8TC41 Probable E3 ubiquitin-protein ligase RNF2171.7e-1827.92Show/hide
Query:  LCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMVN
        +C +CLE K I     +  C  + C +C+  +++A++  G   + CP  +C  F+E  T    L    + K+ +   E   +++    CP   C      
Subjt:  LCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMVN

Query:  LEKG------RSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEW-----MRCPRCKFFVEKTYGCLHITC
         +KG      RS    + +CP C  ++C KC  PWH  V C+EY++            D LL+  A ++E       +CP+CK  +++T GC H+TC
Subjt:  LEKG------RSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEW-----MRCPRCKFFVEKTYGCLHITC

Arabidopsis top hitse value%identityAlignment
AT3G14250.1 RING/U-box superfamily protein2.3e-5544.29Show/hide
Query:  LTAPPENPSRKSKN-GSRSSRQLCEICLERKAIDNMFT-IEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALC
        +T   + P  K++N     SR+LC IC++ K   ++F     C H++C  C +++VA KI   +SR+ CP ++C+R +E  TC  ++PK V ++W++ LC
Subjt:  LTAPPENPSRKSKN-GSRSSRQLCEICLERKAIDNMFT-IEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALC

Query:  EALFVEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEK
        E+L    DK  CPFKDCSA MVN E G  A++ ++EC  CHRLFC +C+V WHA + C+E+QR   +KK+  ++DDALL  +A+  +W RCP CKF+V+K
Subjt:  EALFVEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEK

Query:  TYGCLHITCR
          GC HI CR
Subjt:  TYGCLHITCR

AT3G45470.1 IBR domain containing protein2.5e-3033.51Show/hide
Query:  QLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMV
        + C ICLE    D MF ++ CLH  C  CV + V  K+  G+   +C   +C   +  E C+ +L  +V E W   + E     A ++ CP+ +CS  M 
Subjt:  QLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMV

Query:  NLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
          E  RS    +  C  C  L C  C+VPWH+ ++C EY++ +         DD  LK LA   +W +C +C+  +E   GC H+TCR
Subjt:  NLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

AT3G53690.1 RING/U-box superfamily protein1.5e-4641.75Show/hide
Query:  APPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALF
        APP +  +   + S+++   CEIC++ K+I   F I  C H +C  CV K++AAK+      + CP   CS  +E + C  +LPK V ++W  ALCEA+ 
Subjt:  APPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALF

Query:  VEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGC
        + + K  CP+KDCS A+V LE+     + +SECP CHR+ C +C   WH  +TCEE+Q+   + +RGR  DD LL  +A++ +W RCP CKF++EK+ GC
Subjt:  VEADKVMCPFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGC

Query:  LHITCR
        L++ CR
Subjt:  LHITCR

AT5G37560.1 RING/U-box superfamily protein3.3e-3034.92Show/hide
Query:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLD--CSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMV
        C IC ++   ++M   + CLH  C  CV + V  K+  G   +  P L+  C   +  E+C  +L  ++ E W R + E L  +A+K+ CP++ CS  M 
Subjt:  CEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLD--CSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMCPFKDCSAAMV

Query:  NLEKGRSADILE-SECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR
          E  R A+      C  C  LFC  C+VPWH+ ++C +Y+R +      R  +D +LK LA    W +C  CK  +E T GC HITCR
Subjt:  NLEKGRSADILE-SECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR

AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein3.3e-3031.02Show/hide
Query:  LTAPPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA
        +  P E+P    +      ++ C IC      + MF+++ C H FC +CV +HV  K+  G +   CP   C   +  + C  +L  ++++ W + L E 
Subjt:  LTAPPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEA

Query:  LFVEADKVMCPFKDCSAAMVNLEKGRSADILES--------ECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRC
             ++V CP+  CSA M   +   SA  L S         C  C  LFC  C+VPWH  ++C EY++ +         DD  LK LA    W +C +C
Subjt:  LFVEADKVMCPFKDCSAAMVNLEKGRSADILES--------ECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRC

Query:  KFFVEKTYGCLHITCR
        +  +E + GC HITCR
Subjt:  KFFVEKTYGCLHITCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAACCGCACCGCCCGAAAATCCATCGCGAAAATCCAAAAATGGCAGTCGATCGTCTCGGCAACTGTGCGAGATTTGTTTAGAGAGAAAAGCAATCGACAACATGTTTAC
AATCGAGGCCTGTCTTCACTCCTTCTGCCGCAAATGCGTGATTAAACATGTCGCCGCGAAGATCAACGGCGGATCTTCGCGCGTTTCTTGCCCTAGCTTGGACTGCTCAA
GATTCGTAGAGTTCGAGACCTGCTGGGGAATGCTACCGAAAAGGGTGGCGGAGAAGTGGGATAGAGCGCTTTGCGAAGCGCTGTTTGTGGAAGCAGATAAAGTGATGTGC
CCTTTCAAGGACTGCTCGGCGGCGATGGTGAATCTTGAGAAGGGGCGGTCGGCAGATATATTGGAGAGCGAGTGCCCGATTTGCCACAGGCTGTTCTGCGCCAAGTGCCG
GGTCCCGTGGCACGCGAGAGTCACGTGCGAGGAATATCAGAGACAGAACAAATCAAAGAAGAGAGGGAGAGAGGATGATGACGCGTTGTTGAAGGATCTGGCCCGTAAAA
TGGAGTGGATGAGATGCCCTCGCTGCAAGTTCTTCGTCGAAAAGACTTATGGTTGCTTACATATCACTTGCAGG
mRNA sequenceShow/hide mRNA sequence
TTAACCGCACCGCCCGAAAATCCATCGCGAAAATCCAAAAATGGCAGTCGATCGTCTCGGCAACTGTGCGAGATTTGTTTAGAGAGAAAAGCAATCGACAACATGTTTAC
AATCGAGGCCTGTCTTCACTCCTTCTGCCGCAAATGCGTGATTAAACATGTCGCCGCGAAGATCAACGGCGGATCTTCGCGCGTTTCTTGCCCTAGCTTGGACTGCTCAA
GATTCGTAGAGTTCGAGACCTGCTGGGGAATGCTACCGAAAAGGGTGGCGGAGAAGTGGGATAGAGCGCTTTGCGAAGCGCTGTTTGTGGAAGCAGATAAAGTGATGTGC
CCTTTCAAGGACTGCTCGGCGGCGATGGTGAATCTTGAGAAGGGGCGGTCGGCAGATATATTGGAGAGCGAGTGCCCGATTTGCCACAGGCTGTTCTGCGCCAAGTGCCG
GGTCCCGTGGCACGCGAGAGTCACGTGCGAGGAATATCAGAGACAGAACAAATCAAAGAAGAGAGGGAGAGAGGATGATGACGCGTTGTTGAAGGATCTGGCCCGTAAAA
TGGAGTGGATGAGATGCCCTCGCTGCAAGTTCTTCGTCGAAAAGACTTATGGTTGCTTACATATCACTTGCAGG
Protein sequenceShow/hide protein sequence
LTAPPENPSRKSKNGSRSSRQLCEICLERKAIDNMFTIEACLHSFCRKCVIKHVAAKINGGSSRVSCPSLDCSRFVEFETCWGMLPKRVAEKWDRALCEALFVEADKVMC
PFKDCSAAMVNLEKGRSADILESECPICHRLFCAKCRVPWHARVTCEEYQRQNKSKKRGREDDDALLKDLARKMEWMRCPRCKFFVEKTYGCLHITCR