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MS009359 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009359
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNuclear pore complex protein
Genome locationscaffold813:601523..603261
RNA-Seq ExpressionMS009359
SyntenyMS009359
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575646.1 hypothetical protein SDJN03_26285, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4891.59Show/hide
Query:  KRRSRRKTKVKDRFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAAS
        K RSR KTKVK RFMELWHKMIFPVRRVWL VSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV H+PKRK RPFWRVSVWSNHAAAAS
Subjt:  KRRSRRKTKVKDRFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAAS

Query:  SFTATHA
        S+TATHA
Subjt:  SFTATHA
KAG7014198.1 hypothetical protein SDJN02_24373, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4891.59Show/hide
Query:  KRRSRRKTKVKDRFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAAS
        K RSR KTKVK RFMELWHKMIFPVRRVWL VSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV H+PKRK RPFWRVSVWSNHAAAAS
Subjt:  KRRSRRKTKVKDRFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAAS

Query:  SFTATHA
        S+TATHA
Subjt:  SFTATHA
KGN45194.1 hypothetical protein Csa_015637 [Cucumis sativus]8.8e-4596.77Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
        MELWHKMIFPVRRVWLAVSARVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
XP_022143553.1 uncharacterized protein LOC111013423 [Momordica charantia]1.6e-46100Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
        MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
XP_038900267.1 uncharacterized protein LOC120087349 [Benincasa hispida]1.4e-4597.85Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
        MELWHKMIFPVRRVWLAVSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
TrEMBL top hitse value%identityAlignment
A0A0A0K8I7 Uncharacterized protein4.2e-4596.77Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
        MELWHKMIFPVRRVWLAVSARVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
A0A1S4E346 uncharacterized protein LOC1079917969.5e-4595.7Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
        MELWHKMIFPVRRVWLAVS+RVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
A0A5A7UWX2 Uncharacterized protein4.0e-4392.71Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNH---AAAASSFTATHA
        MELWHKMIFPVRRVWLAVS+RVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV HQPKRKQRPFWRVSVWSNH   AAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNH---AAAASSFTATHA
A0A6J1CR01 uncharacterized protein LOC1110134237.7e-47100Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
        MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
A0A6J1JS76 uncharacterized protein LOC1114884371.0e-4393.55Show/hide
Query:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
        MELWHKMIFPVRRVWL VSARVRARK+GAGLLKLHDDVETCGYEDVKVMWE+LRRSESELVGH+PKRK RPFWRVSVWSNHAAAASS+TATHA
Subjt:  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G43150.1 unknown protein8.8e-1136.25Show/hide
Query:  RFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL---VGHQPKRKQRPFWRV
        R+ E W+ M FP RR+W   + RV  R   +GLL+L  DV +C YED+ +MW +L ++E      +  Q +++++P W +
Subjt:  RFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL---VGHQPKRKQRPFWRV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAGGCGGAGCAGGAGGAAGACGAAGGTTAAGGATCGGTTTATGGAGCTCTGGCACAAGATGATTTTCCCCGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGCGTTAG
GGCTCGGAAGAACGGAGCTGGACTTTTGAAGCTCCATGACGATGTAGAAACCTGCGGGTATGAAGATGTGAAGGTGATGTGGGAAATGCTTCGTAGATCGGAGTCGGAGC
TGGTCGGTCACCAGCCGAAGCGGAAGCAGCGGCCGTTCTGGCGAGTCTCGGTGTGGTCCAACCACGCCGCTGCAGCCTCGTCTTTCACTGCAACTCATGCT
mRNA sequenceShow/hide mRNA sequence
AAGAGGCGGAGCAGGAGGAAGACGAAGGTTAAGGATCGGTTTATGGAGCTCTGGCACAAGATGATTTTCCCCGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGCGTTAG
GGCTCGGAAGAACGGAGCTGGACTTTTGAAGCTCCATGACGATGTAGAAACCTGCGGGTATGAAGATGTGAAGGTGATGTGGGAAATGCTTCGTAGATCGGAGTCGGAGC
TGGTCGGTCACCAGCCGAAGCGGAAGCAGCGGCCGTTCTGGCGAGTCTCGGTGTGGTCCAACCACGCCGCTGCAGCCTCGTCTTTCACTGCAACTCATGCT
Protein sequenceShow/hide protein sequence
KRRSRRKTKVKDRFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA