CuGenDBv2

Gene ID	MS009362
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein HEADING DATE REPRESSOR 1
Genome location	scaffold813:613641..616605
RNA-Seq Expression	MS009362
Synteny	MS009362
Gene Ontology terms	GO:0009909 - regulation of flower development (biological process)
InterPro domains	IPR038864 - Protein heading date repressor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004135890.1 protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus]

7.4e-88

83.96

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQE-EPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPS
        ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNLDK TED DSANK  DKQE  P + + +QD   ++V PELSERR+ALFEPLEPV+NINGRRPS
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQE-EPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPS

Query:  AESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNML
        AESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL++EKSKRSEVERENAMLHDQINMLM+ML
Subjt:  AESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNML

Query:  ENEGA-DGSDEP
        +NEGA DGSDEP
Subjt:  ENEGA-DGSDEP

XP_008461210.1 PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo]

2.7e-90

84.76

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNL K TED DSANK  DKQEE    D     + + VPPELSERR+ALFEPLEPV+NINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSEVERENAMLHDQINMLM+ML+
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

XP_022148239.1 protein HEADING DATE REPRESSOR 1 [Momordica charantia]

3.6e-111

99.52

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLV+EKSKRSEVERENAMLHDQINMLMNMLE
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

XP_022959741.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucurbita moschata]

2.1e-87

80.48

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        M RDNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK +EP           + + P+LS+RR+ALFEPLE +KNINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIA+QEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSEVERENAMLHDQ++MLM+MLE
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

XP_038897908.1 protein HEADING DATE REPRESSOR 1 [Benincasa hispida]

2.2e-92

87.14

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        ME ++SGKIDRILEGFSPASAPRI WKSRRRSASGRNLDKVTEDHDSA K  DKQEE H  DK    +   V PELSERR+ALFEPLEPVKNINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQLQL++EKSKRSEVERENAMLHDQINMLM+ML+
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CE60 uncharacterized protein LOC103499861

1.3e-90

84.76

Show/hide

Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNL K TED DSANK  DKQEE    D     + + VPPELSERR+ALFEPLEPV+NINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSEVERENAMLHDQINMLM+ML+
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

A0A5A7UUH2 Protein HEADING DATE REPRESSOR 1-like isoform X2

1.3e-90

84.76

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        ME ++SGKIDRILEGFSPASAPRI W SRRRSASGRNL K TED DSANK  DKQEE    D     + + VPPELSERR+ALFEPLEPV+NINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFD T YPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSEVERENAMLHDQINMLM+ML+
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

A0A6J1D3E7 protein HEADING DATE REPRESSOR 1

1.8e-111

99.52

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLV+EKSKRSEVERENAMLHDQINMLMNMLE
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

A0A6J1H5Q2 protein HEADING DATE REPRESSOR 1-like isoform X2

1.0e-87

80.48

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Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        M RDNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK +EP           + + P+LS+RR+ALFEPLE +KNINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIA+QEMNRKDREIDGLNEQLDEDARCLEHLQ+QL++EKSKRSEVERENAMLHDQ++MLM+MLE
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADGSDEP
Subjt:  NEGADGSDEP

A0A6J1KTY5 protein HEADING DATE REPRESSOR 1

3.3e-86

79.52

Show/hide

Query:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA
        M  DNSGK+DRILEGFSPASAPRI WKSRRRSA+GR LD +T+DHD+A+K  DK EEP           + + P+LS+RR+ALFEPLE +KNINGRRPSA
Subjt:  MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQLDEDARCLEHLQ+QL++EKSKRSEVERENAMLHDQ++MLM+MLE
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
        NEGADG DEP
Subjt:  NEGADGSDEP

SwissProt top hits

e value

%identity

Alignment

B8AE37 Protein HEADING DATE REPRESSOR 1

5.2e-52

60.1

Show/hide

Query:  PASA--PRIHWKSRRRSAS--GRNLDKV-----------TEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAES
        PASA  PRI WKSRRRSAS  GR+L +             + H+ A KI D      D D   D +A      LSE+R+ALFEPLEP   ING+R SAE 
Subjt:  PASA--PRIHWKSRRRSAS--GRNLDKV-----------TEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAES

Query:  LLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNML-EN
        LLPPPDF+  +YP+GWL+GKKRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+MLH+Q++MLMNML EN
Subjt:  LLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNML-EN

Query:  EGADGSDE
        E  D   E
Subjt:  EGADGSDE

Q6K678 Protein HEADING DATE REPRESSOR 1

5.2e-52

60.1

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Query:  PASA--PRIHWKSRRRSAS--GRNLDKV-----------TEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAES
        PASA  PRI WKSRRRSAS  GR+L +             + H+ A KI D      D D   D +A      LSE+R+ALFEPLEP   ING+R SAE 
Subjt:  PASA--PRIHWKSRRRSAS--GRNLDKV-----------TEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAES

Query:  LLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNML-EN
        LLPPPDF+  +YP+GWL+GKKRKLVNVDVVESMRRIA+QEMNRKDREI+GLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+MLH+Q++MLMNML EN
Subjt:  LLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNML-EN

Query:  EGADGSDE
        E  D   E
Subjt:  EGADGSDE

Arabidopsis top hits

e value

%identity

Alignment

AT1G80940.1 unknown protein

2.8e-61

59.05

Show/hide

Query:  ERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRP-SA
        E+D     D  + GF P S  +I WKSR+RSA   NLDK  E   +  ++  ++ E    D  +  E     P LSE+R+ALFEPLEP+ N+NG+RP +A
Subjt:  ERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRP-SA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE
        +SLLPPPDF+   YP+GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQL+ED+RCLEHLQLQL++E+SKR+E+EREN ML +Q++ML+NM++
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLE

Query:  NEGADGSDEP
         +  +G++EP
Subjt:  NEGADGSDEP

AT1G80940.2 unknown protein

1.3e-34

55.03

Show/hide

Query:  ERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRP-SA
        E+D     D  + GF P S  +I WKSR+RSA   NLDK  E   +  ++  ++ E    D  +  E     P LSE+R+ALFEPLEP+ N+NG+RP +A
Subjt:  ERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRP-SA

Query:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE
        +SLLPPPDF+   YP+GWLIGKKRKLVNVDVVESMRRIAVQEMNRK ++
Subjt:  ESLLPPPDFDATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDRE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGCGCGATAATTCCGGCAAGATTGACAGGATTCTCGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCACTGGAAATCTCGCCGTAGATCAGCTAGCGGGAGGAA
TTTAGACAAGGTAACTGAAGATCATGATTCTGCTAATAAAATTTGGGACAAACAGGAAGAACCTCATGACAAGGACAAAACTCAGGACCTCGAGGCCGAGGTCGTCCCCC
CTGAGCTCTCCGAGCGTCGGAGGGCCCTGTTTGAACCCTTAGAACCTGTGAAAAACATCAATGGCAGAAGGCCATCAGCTGAATCCTTACTCCCTCCGCCTGACTTCGAC
GCCACCGCTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGAAAACTTGTCAATGTTGACGTCGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAACAGAAAGGA
CCGGGAAATCGACGGTTTGAACGAGCAGCTTGACGAGGACGCTCGCTGCTTAGAACATCTTCAACTTCAGCTTGTGCGAGAAAAGAGCAAGAGGTCAGAGGTTGAAAGAG
AAAATGCAATGCTGCATGATCAAATAAACATGCTAATGAACATGCTAGAAAATGAAGGAGCAGATGGCTCAGATGAACCT

mRNA sequence

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Protein sequence

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MERDNSGKIDRILEGFSPASAPRIHWKSRRRSASGRNLDKVTEDHDSANKIWDKQEEPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFD
ATAYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVREKSKRSEVERENAMLHDQINMLMNMLENEGADGSDEP

MS009362 (gene) of Bitter gourd (TR) v1 genome