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MS009364 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009364
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor bHLH93-like
Genome locationscaffold813:625456..625596
RNA-Seq ExpressionMS009364
SyntenyMS009364
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0015276 - ligand-gated ion channel activity (molecular function)
GO:0038023 - signaling receptor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585313.1 Transcription factor basic helix-loop-helix 93, partial [Cucurbita argyrosperma subsp. sororia]6.4e-0867.92Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK
        +RT IL DAI+YMKELL+KIGNLQRE+DR+NQT      ++K S FVVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK

KAG7020231.1 Transcription factor bHLH93 [Cucurbita argyrosperma subsp. argyrosperma]6.4e-0867.92Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK
        +RT IL DAI+YMKELL+KIGNLQRE+DR+NQT      ++K S FVVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK

XP_022131289.1 transcription factor bHLH93-like [Momordica charantia]4.0e-1080.39Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQTNS----KSSVFVVRNSPK
        +RT IL DAIEYMKELL+KIGNLQREVDRSNQTNS    K S FVVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQTNS----KSSVFVVRNSPK

XP_022950965.1 transcription factor bHLH93-like isoform X1 [Cucurbita moschata]6.4e-0867.92Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK
        +RT IL DAI+YMKELL+KIGNLQRE+DR+NQT      ++K S FVVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK

XP_023002803.1 transcription factor bHLH93-like isoform X1 [Cucurbita maxima]1.2e-0664.15Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK
        +RT IL DAI+YMKELL+KIG+LQRE+DR+NQT      ++K S  VVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK

TrEMBL top hitse value%identityAlignment
A0A6J1BPT9 transcription factor bHLH93-like1.9e-1080.39Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQTNS----KSSVFVVRNSPK
        +RT IL DAIEYMKELL+KIGNLQREVDRSNQTNS    K S FVVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQTNS----KSSVFVVRNSPK

A0A6J1GH95 transcription factor bHLH93-like isoform X13.1e-0867.92Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK
        +RT IL DAI+YMKELL+KIGNLQRE+DR+NQT      ++K S FVVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK

A0A6J1HDL3 transcription factor bHLH93-like1.0e-0665.38Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT-----NSKSSVFVVRNSPK
        +RT IL DAIEYMKELL+KIGNLQREVD SN +     N+K S  + RNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT-----NSKSSVFVVRNSPK

A0A6J1K4D0 transcription factor bHLH93-like1.0e-0667.31Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQ-----TNSKSSVFVVRNSPK
        +RT IL DAIEYMKELL+KIGNLQREVD SN       N+K S  V RNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQ-----TNSKSSVFVVRNSPK

A0A6J1KUM9 transcription factor bHLH93-like isoform X15.9e-0764.15Show/hide
Query:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK
        +RT IL DAI+YMKELL+KIG+LQRE+DR+NQT      ++K S  VVRNSPK
Subjt:  ERTRILVDAIEYMKELLKKIGNLQREVDRSNQT------NSKSSVFVVRNSPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAAGAACTAGGATTCTGGTGGATGCAATTGAGTACATGAAAGAACTACTCAAGAAGATTGGGAATCTGCAAAGAGAAGTGGATCGATCAAATCAAACGAATTCAAAATC
GAGCGTATTCGTAGTGAGAAATTCACCAAAA
mRNA sequenceShow/hide mRNA sequence
GAAAGAACTAGGATTCTGGTGGATGCAATTGAGTACATGAAAGAACTACTCAAGAAGATTGGGAATCTGCAAAGAGAAGTGGATCGATCAAATCAAACGAATTCAAAATC
GAGCGTATTCGTAGTGAGAAATTCACCAAAA
Protein sequenceShow/hide protein sequence
ERTRILVDAIEYMKELLKKIGNLQREVDRSNQTNSKSSVFVVRNSPK