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MS009370 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009370
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold813:665098..665391
RNA-Seq ExpressionMS009370
SyntenyMS009370
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058699.1 hypothetical protein E6C27_scaffold339G001690 [Cucumis melo var. makuwa]2.3e-3989.8Show/hide
Query:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        GSCNMVLDSVLSSPHRRSPSFRK F PNE GSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFG+TG QK QC+LELAK S+AKGKLKIL
Subjt:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
KAE8646426.1 hypothetical protein Csa_016913 [Cucumis sativus]2.3e-3990.82Show/hide
Query:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        GSC MVLDSVLSSPHRRSPSFRK F PNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFG+TG QK QC LELAK SMAKGKLKIL
Subjt:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
KAG6593358.1 hypothetical protein SDJN03_12834, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3990.82Show/hide
Query:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        GSCNMVLDSVLSSPHRRSPSFRK FPPNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Subjt:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
KAG7025704.1 hypothetical protein SDJN02_12202, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-3990.82Show/hide
Query:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        GSCNMVLDSVLSSPHRRSPSFRK FPPNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Subjt:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
XP_022155001.1 uncharacterized protein LOC111022141 [Momordica charantia]2.0e-43100Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
TrEMBL top hitse value%identityAlignment
A0A0A0K6S1 Uncharacterized protein1.1e-3990.82Show/hide
Query:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        GSC MVLDSVLSSPHRRSPSFRK F PNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFG+TG QK QC LELAK SMAKGKLKIL
Subjt:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
A0A5D3CG60 Uncharacterized protein1.1e-3989.8Show/hide
Query:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        GSCNMVLDSVLSSPHRRSPSFRK F PNE GSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFG+TG QK QC+LELAK S+AKGKLKIL
Subjt:  GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
A0A6J1DQE0 uncharacterized protein LOC1110221419.6e-44100Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
A0A6J1H8Z6 uncharacterized protein LOC1114607226.6e-3790.43Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK FPPNE GSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
A0A6J1KRB5 uncharacterized protein LOC1114979678.7e-3789.36Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
        MVLDSVLSSPHRRSPSFRK FPPNE GSWSTL+QRHRFLLTALVLLTFLCTIYLYFAVTLG SSSC G+TG QK QC+LELAK SMAKGKLKIL
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16170.1 unknown protein1.4e-2360.22Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGS-SSSCFGMTGVQKEQCRLELAKASMAKGKLK
        MVLD ++SSP RR    +K +  +E GSWSTL+QRH++LLTAL LL FLCT+YLYFAVTLG+  SSC+G+TG  K  C+L+L +A ++KGKLK
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGS-SSSCFGMTGVQKEQCRLELAKASMAKGKLK
AT1G79660.1 unknown protein8.6e-2156.99Show/hide
Query:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSS-SCFGMTGVQKEQCRLELAKASMAKGKLK
        MVLD ++SSP RR  + +K +  ++ GS ST+VQRHRFLLTA++LL FLCTIY+YFAVTLG+    C GMTG  K  C++E  +AS + GKLK
Subjt:  MVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSS-SCFGMTGVQKEQCRLELAKASMAKGKLK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCGAAAGCCCTTTCCTCCGAACGAGTTTGGTAGTTGGTCGACTCTCGT
TCAGCGGCATCGCTTCCTCCTAACGGCACTCGTCCTCTTGACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTCTTGCTTTGGGATGA
CGGGGGTGCAAAAAGAACAGTGTCGATTGGAGCTCGCAAAGGCTTCCATGGCTAAAGGGAAACTGAAAATTCTA
mRNA sequenceShow/hide mRNA sequence
GGATCATGCAACATGGTTCTTGACAGTGTCCTGTCTTCTCCTCACAGGAGGTCCCCATCATTCCGAAAGCCCTTTCCTCCGAACGAGTTTGGTAGTTGGTCGACTCTCGT
TCAGCGGCATCGCTTCCTCCTAACGGCACTCGTCCTCTTGACTTTTCTTTGCACAATTTACCTTTACTTTGCTGTCACCTTAGGCTCTTCCTCTTCTTGCTTTGGGATGA
CGGGGGTGCAAAAAGAACAGTGTCGATTGGAGCTCGCAAAGGCTTCCATGGCTAAAGGGAAACTGAAAATTCTA
Protein sequenceShow/hide protein sequence
GSCNMVLDSVLSSPHRRSPSFRKPFPPNEFGSWSTLVQRHRFLLTALVLLTFLCTIYLYFAVTLGSSSSCFGMTGVQKEQCRLELAKASMAKGKLKIL