CuGenDBv2

Gene ID	MS009373
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	pre-mRNA-splicing factor ISY1 homolog
Genome location	scaffold813:678360..679268
RNA-Seq Expression	MS009373
Synteny	MS009373
Gene Ontology terms	GO:0000350 - generation of catalytic spliceosome for second transesterification step (biological process) GO:0000389 - mRNA 3'-splice site recognition (biological process) GO:0000974 - Prp19 complex (cellular component) GO:0071013 - catalytic step 2 spliceosome (cellular component) GO:0071014 - post-mRNA release spliceosomal complex (cellular component) GO:0071020 - post-spliceosomal complex (cellular component)
InterPro domains	IPR009360 - Pre-mRNA-splicing factor Isy1 IPR029012 - Helix hairpin bin domain superfamily IPR037200 - Pre-mRNA-splicing factor Isy1 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008461190.1 PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis melo]

4.4e-158

98.68

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TKHSAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAK+MLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_011659495.1 pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]

1.5e-158

99.01

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAK+MLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_022152151.1 pre-mRNA-splicing factor ISY1 homolog [Momordica charantia]

4.0e-159

99.67

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMR EAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_022960451.1 pre-mRNA-splicing factor ISY1 homolog [Cucurbita moschata]

1.1e-156

98.02

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        +K+SAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEER+REREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAKTMLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

XP_023004198.1 pre-mRNA-splicing factor ISY1 homolog [Cucurbita maxima]

3.7e-157

98.35

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TK+SAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEER+REREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAKTMLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBN6 Uncharacterized protein

7.3e-159

99.01

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAK+MLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A1S3CE48 pre-mRNA-splicing factor ISY1 homolog

2.1e-158

98.68

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TKHSAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAK+MLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A5D3CH05 Pre-mRNA-splicing factor ISY1-like protein

2.1e-158

98.68

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRI+ELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TKHSAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAK+MLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A6J1DGR8 pre-mRNA-splicing factor ISY1 homolog

1.9e-159

99.67

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMR EAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

A0A6J1KYR8 pre-mRNA-splicing factor ISY1 homolog

1.8e-157

98.35

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        TK+SAKMTDL+GNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEER+RAEAVEEWQRME
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEER+REREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLL+EQSEAKTMLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        IQR
Subjt:  IQR

SwissProt top hits

e value

%identity

Alignment

Q20716 Protein isy-1

3.0e-45

42.61

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARN EKA + L R+  +K EE++ P  RRP+   +CR+L++A+++R++I+R+  +K+  IQN GLGE +LRDLNDE+N+LI+ K  WE+RI ELGG +Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPE-LRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRM
         K++ K  D  G        +G   GY+YFGAAK LPGVRELFEK  E   +RR R D+ + IDA Y+GY DDEDG L  +E   EE+           +
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPE-LRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRM

Query:  EEIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKY
        E I KE   A K  +     + AA E +++ EE+  +++ + +       D     + HV LP +++IE+M+LE+KK EL++KY
Subjt:  EEIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKY

Q54N41 Pre-mRNA-splicing factor ISY1 homolog

3.6e-54

43.46

Show/hide

Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKA+SMLNR++ LK  E K+ +ERRPYL++EC  L +A+KWR+QI++EI R + EIQN  L E+++RDLND INKL+REK HWERRI++LGGPN+
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPEL---RKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQ
           + K+ D DG       P G G  YRY+G AK LPGV ELFEKP +     +++TR D+YK ID+ YYGYRDDEDG LE +E   E+    + VE W+
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPEL---RKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQ

Query:  RMEEIRKEA------KRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKRER------EMKENLDKERE-----FVVHVPLPDEKEIEKMVLEKKKMELL
        + +  + +          +K+    +       E+  +++EE  +             E  EN+ +E E     F  +V LP   +IE ++LEK+K EL 
Subjt:  RMEEIRKEA------KRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKRER------EMKENLDKERE-----FVVHVPLPDEKEIEKMVLEKKKMELL

Query:  SKYASD
         +Y  +
Subjt:  SKYASD

Q69ZQ2 Pre-mRNA-splicing factor ISY1 homolog

2.2e-64

50.5

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARN EKA + L RF   + EE  K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+IQN GLGE R+RDLNDEINKL+REK HWE RI ELGGP+Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
         K   KM D +G  V    P  R  GY+YFGAAK LPGVRELFEK P    R+TR ++ K ID  YYGY D++DGV+  +E   E+++RAE VE+W+   
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTML
        E R       +  E    +N+ A  V  EE +E   +E+  E       D +++F+ HVP+P ++EIE+ ++ +KKMELL KYAS+ L  +  EAK +L
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTML

Q6AYB3 Pre-mRNA-splicing factor ISY1 homolog

2.2e-64

51.17

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARN EKA + L RF   + EE  K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+IQN GLGE R+RDLNDEINKL+REK HWE RI ELGGP+Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
         K   KM D +G  V    P  R  GY+YFGAAK LPGVRELFEK P    R+TR ++ K ID  YYGY D++DGV+  +E   E+R+RAE VE+W+   
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTML
        E R  A+   +  E    +N+ A  V  EE +E   +E+  E       D +++F+ HVP+P ++EIE+ ++ +KKMELL KYAS+ L  +  EAK +L
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTML

Q9ULR0 Pre-mRNA-splicing factor ISY1 homolog

1.1e-63

51.15

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARN EKA + L RF   + EE  K KERRP+LASEC +L +A+KWR+QI+ EI +KVA+IQN GLGE R+RDLNDEINKL+REK HWE RI ELGGP+Y
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
         K   KM D +G  V    P  R  GY+YFGAAK LPGVRELFEK P    R+TR ++ K ID  YYGY D++DGV+  +E   E+++RAE VE+W+   
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEE-----VVEEERKRE-REMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSE
        E R      +  GE         KE   EEEEE     V EEE   E  + K   D +++F+ HVP+P ++EIE+ ++ +KKMELL KYAS+ L  +  E
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEE-----VVEEERKRE-REMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSE

Query:  AKTML
        A+ +L
Subjt:  AKTML

Arabidopsis top hits

e value

%identity

Alignment

AT3G18790.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink).

4.6e-129

79.87

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Query:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY
        MARNEEKAQSMLNRFI  K  EKKKPKERRPYLASECRDLAEADKWRQQI+REIG KVAEIQNEGLGEHRLRDLNDEINKL+RE+ HWERRIVELGG NY
Subjt:  MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNY

Query:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME
        +KHSAKMTDL+GNI+DVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKR+TRYDIYKRIDASYYGYRDDEDG+LE++E  SE  MR  +VEEW+R++
Subjt:  TKHSAKMTDLDGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRME

Query:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN
        E+RKEA++             AA+EVLFEEEE+VVEEER  ERE +E  +KEREFVVHVPLPDEKEIEKMVLEKKKM+LLSKYAS+ L+++Q+EAK+MLN
Subjt:  EIRKEAKRAVKSGEVASVVNVAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLN

Query:  IQR
        I R
Subjt:  IQR

Sequences

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CDS sequence

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ATGGCTCGAAATGAGGAGAAAGCACAGTCAATGCTAAATCGTTTCATTGCCTTAAAAGCTGAGGAGAAGAAGAAACCTAAGGAACGCCGACCCTACCTTGCCTCTGAGTG
TCGTGACCTTGCAGAAGCTGACAAATGGCGTCAGCAAATCATGCGTGAGATTGGGCGTAAGGTTGCAGAGATCCAAAATGAAGGCCTTGGTGAGCATCGCTTACGTGATC
TCAATGATGAGATCAACAAGCTTATCAGAGAAAAGTCACATTGGGAGCGTCGTATAGTTGAGCTAGGTGGCCCCAATTATACCAAACACTCGGCTAAAATGACTGACTTG
GACGGAAACATTGTTGATGTACCAAACCCAAGTGGTCGTGGTCCTGGATATCGGTATTTTGGTGCTGCTAAGAAGTTACCAGGTGTGAGGGAGTTGTTTGAGAAGCCACC
TGAACTAAGGAAGCGTAGGACTCGTTATGACATATACAAGAGGATCGATGCAAGCTACTATGGCTACAGGGATGACGAGGATGGGGTTTTGGAAAGAGTGGAAGGTCCAA
GTGAAGAGCGTATGAGAGCCGAGGCAGTCGAAGAGTGGCAGAGAATGGAAGAGATAAGGAAAGAAGCGAAGAGGGCAGTAAAGAGCGGGGAGGTAGCGAGCGTGGTGAAC
GTTGCAGCAAAGGAGGTACTATTTGAGGAGGAGGAAGAGGTTGTGGAAGAAGAGAGGAAAAGAGAGAGGGAAATGAAGGAGAATTTGGACAAGGAGAGGGAGTTTGTGGT
GCATGTGCCTTTACCTGATGAGAAAGAGATTGAGAAGATGGTACTGGAGAAGAAGAAGATGGAACTGTTGAGTAAGTATGCGAGTGATATGCTTTTGGATGAACAGAGCG
AAGCCAAGACCATGCTCAATATACAGAGG

mRNA sequence

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Protein sequence

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MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAEIQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNYTKHSAKMTDL
DGNIVDVPNPSGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDDEDGVLERVEGPSEERMRAEAVEEWQRMEEIRKEAKRAVKSGEVASVVN
VAAKEVLFEEEEEVVEEERKREREMKENLDKEREFVVHVPLPDEKEIEKMVLEKKKMELLSKYASDMLLDEQSEAKTMLNIQR

MS009373 (gene) of Bitter gourd (TR) v1 genome