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MS009377 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009377
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase subunit beta'
Genome locationscaffold813:701537..701611
RNA-Seq ExpressionMS009377
SyntenyMS009377
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADV91509.1 RNA polymerase subunit beta', partial [Malva excisa]7.9e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
QWC53570.1 RNA polymerase beta' subunit [Choerospondias axillaris]7.9e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
YP_009355683.1 RNA polymerase beta [Fragaria pentaphylla]7.9e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
YP_009415918.1 DNA-directed RNA polymerase beta' subunit [Gordonia brandegeei]7.9e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
YP_009570686.1 RNA polymerase beta subunit [Frankenia pulverulenta]7.9e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
TrEMBL top hitse value%identityAlignment
A0A175DGG4 DNA-directed RNA polymerase subunit beta'3.8e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
A0A1D0CBK6 DNA-directed RNA polymerase subunit beta'3.8e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
A0A346QB93 DNA-directed RNA polymerase subunit beta'3.8e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
A0A4D5YC09 DNA-directed RNA polymerase subunit beta'3.8e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
A0A5C2IDQ2 DNA-directed RNA polymerase subunit beta'3.8e-05100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
SwissProt top hitse value%identityAlignment
A4QJA6 DNA-directed RNA polymerase subunit beta'1.0e-07100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
A9LYH6 DNA-directed RNA polymerase subunit beta'1.0e-07100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
P60287 DNA-directed RNA polymerase subunit beta'1.0e-07100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
Q3V543 DNA-directed RNA polymerase subunit beta'1.0e-07100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
Q5QA71 DNA-directed RNA polymerase subunit beta'1.0e-07100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR
Arabidopsis top hitse value%identityAlignment
ATCG00180.1 DNA-directed RNA polymerase family protein7.3e-09100Show/hide
Query:  MCQEKLVQEAVDTLLDNGIRGQPMR
        MCQEKLVQEAVDTLLDNGIRGQPMR
Subjt:  MCQEKLVQEAVDTLLDNGIRGQPMR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCAGGAGAAATTGGTCCAAGAAGCCGTGGATACACTTCTTGATAATGGAATCCGCGGACAACCAATGAGG
mRNA sequenceShow/hide mRNA sequence
ATGTGTCAGGAGAAATTGGTCCAAGAAGCCGTGGATACACTTCTTGATAATGGAATCCGCGGACAACCAATGAGG
Protein sequenceShow/hide protein sequence
MCQEKLVQEAVDTLLDNGIRGQPMR