; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009391 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009391
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVQ motif-containing protein 11
Genome locationscaffold813:1006958..1007347
RNA-Seq ExpressionMS009391
SyntenyMS009391
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039611 - VQ motif-containing protein 4/11/13/19/31/33


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004154113.2 VQ motif-containing protein 11 [Cucumis sativus]1.3e-2963.57Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        +N+ AV  ++TTTFV+ADPSTFR+IVQ+LTGAP  PP    RL ERRRSSKKLELEL    G T   G+G GM SPVSTL+F+  GSPCE+   E+RAIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRPS----PRGSDPPQLLPLFPIS
        EKG+Y  PS    P GSDPP LLPLFP+S
Subjt:  EKGFYFRPS----PRGSDPPQLLPLFPIS

XP_008461422.1 PREDICTED: VQ motif-containing protein 11 [Cucumis melo]6.7e-3165.12Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        +N+ AV  + TTTFV+ADPSTFR+IVQ+LTGAP  PP    RL ERRRSSKKLELEL    G T A G+GIGM SPVSTL+F+  GSPCE+   E+RAIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRPS----PRGSDPPQLLPLFPIS
        EKG+Y  PS    P GSDPP LLPLFP+S
Subjt:  EKGFYFRPS----PRGSDPPQLLPLFPIS

XP_022151505.1 VQ motif-containing protein 11 [Momordica charantia]6.6e-6397.01Show/hide
Query:  MASNS----AAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQEL
        MASNS    AAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQEL
Subjt:  MASNS----AAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQEL

Query:  EDRAIAEKGFYFRPSPRGSDPPQLLPLFPISVTP
        EDRAIAEKGFYFRPSPRGSDPPQLLPLFPISVTP
Subjt:  EDRAIAEKGFYFRPSPRGSDPPQLLPLFPISVTP

XP_022953968.1 VQ motif-containing protein 11-like [Cucurbita moschata]3.7e-2963.64Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        + +A V  TTTT FVQADPSTFRAIVQ+LTGAPTDPP    RL E RRSSKKLE+ELE        RG+G  M SPVSTL+F+T  SPCE+   E++AIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRP----SPRGSDPPQLLPLFPISVTP
        EKGFY  P    +PRGSDPP LLPLFP+S  P
Subjt:  EKGFYFRP----SPRGSDPPQLLPLFPISVTP

XP_038897860.1 VQ motif-containing protein 11-like [Benincasa hispida]3.0e-3168.22Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        +N  AV  + TTTFV+ADPSTFRAIVQ+LTGAP  PP    RL ERRRSSKKLELEL    G TAA   GIGM SPVSTLEF+ RGSPCE+   E+RAIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRPS----PRGSDPPQLLPLFPIS
        EKGFY  PS    P GSDPP LLPLFP+S
Subjt:  EKGFYFRPS----PRGSDPPQLLPLFPIS

TrEMBL top hitse value%identityAlignment
A0A0A0K6W6 VQ domain-containing protein6.1e-3063.57Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        +N+ AV  ++TTTFV+ADPSTFR+IVQ+LTGAP  PP    RL ERRRSSKKLELEL    G T   G+G GM SPVSTL+F+  GSPCE+   E+RAIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRPS----PRGSDPPQLLPLFPIS
        EKG+Y  PS    P GSDPP LLPLFP+S
Subjt:  EKGFYFRPS----PRGSDPPQLLPLFPIS

A0A1S3CF34 VQ motif-containing protein 113.2e-3165.12Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        +N+ AV  + TTTFV+ADPSTFR+IVQ+LTGAP  PP    RL ERRRSSKKLELEL    G T A G+GIGM SPVSTL+F+  GSPCE+   E+RAIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRPS----PRGSDPPQLLPLFPIS
        EKG+Y  PS    P GSDPP LLPLFP+S
Subjt:  EKGFYFRPS----PRGSDPPQLLPLFPIS

A0A5D3CGZ5 VQ motif-containing protein 113.2e-3165.12Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        +N+ AV  + TTTFV+ADPSTFR+IVQ+LTGAP  PP    RL ERRRSSKKLELEL    G T A G+GIGM SPVSTL+F+  GSPCE+   E+RAIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRPS----PRGSDPPQLLPLFPIS
        EKG+Y  PS    P GSDPP LLPLFP+S
Subjt:  EKGFYFRPS----PRGSDPPQLLPLFPIS

A0A6J1DBD5 VQ motif-containing protein 113.2e-6397.01Show/hide
Query:  MASNS----AAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQEL
        MASNS    AAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQEL
Subjt:  MASNS----AAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQEL

Query:  EDRAIAEKGFYFRPSPRGSDPPQLLPLFPISVTP
        EDRAIAEKGFYFRPSPRGSDPPQLLPLFPISVTP
Subjt:  EDRAIAEKGFYFRPSPRGSDPPQLLPLFPISVTP

A0A6J1GPT7 VQ motif-containing protein 11-like1.8e-2963.64Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA
        + +A V  TTTT FVQADPSTFRAIVQ+LTGAPTDPP    RL E RRSSKKLE+ELE        RG+G  M SPVSTL+F+T  SPCE+   E++AIA
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIA

Query:  EKGFYFRP----SPRGSDPPQLLPLFPISVTP
        EKGFY  P    +PRGSDPP LLPLFP+S  P
Subjt:  EKGFYFRP----SPRGSDPPQLLPLFPISVTP

SwissProt top hitse value%identityAlignment
O23660 VQ motif-containing protein 132.9e-0529.75Show/hide
Query:  TTFVQADPSTFRAIVQRLTGAPTDPPRPP------------------------CRLHERRRSSKK-LELELERKGGDTAAR-------GMGIGMASPVST
        TTF++ DPS+F+ +VQ LTG P +P   P                         RL ERR S K  L +     G              + +   +P+ +
Subjt:  TTFVQADPSTFRAIVQRLTGAPTDPPRPP------------------------CRLHERRRSSKK-LELELERKGGDTAAR-------GMGIGMASPVST

Query:  LEFVTRGS---------PCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS
          F   GS         P  D + ++R+I EKGFY RPSP  +     P+LL LFP++
Subjt:  LEFVTRGS---------PCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS

Q9FHZ3 VQ motif-containing protein 331.5e-0428.04Show/hide
Query:  TTFVQADPSTFRAIVQRLTGAPTDPPR---------------------PPC------RLHERRRSSKKL---------ELELERK------GGDTAARGM
        TTFVQAD STF+ +VQ LTG+ TD                        PP       +L+ERR+++  +          L L+        GG+++    
Subjt:  TTFVQADPSTFRAIVQRLTGAPTDPPR---------------------PPC------RLHERRRSSKKL---------ELELERK------GGDTAARGM

Query:  ------------------------GIGMASPVSTL----EFVTRGSPCE--DQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS
                                 +G+ SPV+ L    +   + SP    +   ED+AIA+KGFY  PSP  +     P LLPLFP++
Subjt:  ------------------------GIGMASPVSTL----EFVTRGSPCE--DQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS

Q9FNP0 VQ motif-containing protein 312.8e-0834.16Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTD-----------------PPRPPCRLHERRRSSK-KLEL------------ELERKGGDTAARGMG
        S + A      TTFVQ D +TFR IVQRLTG PT+                   RP  +LHERR+  + KLE+                K G+T      
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTD-----------------PPRPPCRLHERRRSSK-KLEL------------ELERKGGDTAARGMG

Query:  IGMASPVSTLEFVTRGSP---CEDQELEDRAIAEKGFYFRPSPR---GSDPPQLLPLFPIS
        +G  S + +   +  G P     + E E++AI E+ FY  PSPR   G   P+LL LFP++
Subjt:  IGMASPVSTLEFVTRGSP---CEDQELEDRAIAEKGFYFRPSPR---GSDPPQLLPLFPIS

Q9LDZ1 VQ motif-containing protein 191.1e-0429.21Show/hide
Query:  TTFVQADPSTFRAIVQRLTGAPT----DPPRPPC------------------------RLHERR---------RSSKKLELELERKGGDTAARGM-----
        TTFVQAD S+F+ +VQ LTG+ +    D PRPP                         +L+ERR         ++S  +   +   GG  + R       
Subjt:  TTFVQADPSTFRAIVQRLTGAPT----DPPRPPC------------------------RLHERR---------RSSKKLELELERKGGDTAARGM-----

Query:  ----------GIGMASPVSTLEFVTRG---------SPCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS
                   + + SPV+ L+  T G         SP  +   E+R IA+KG+Y   SP  +     PQLLPLFP++
Subjt:  ----------GIGMASPVSTLEFVTRG---------SPCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS

Q9M8L3 VQ motif-containing protein 114.0e-1845.95Show/hide
Query:  TTFVQADPSTFRAIVQRLTGAPTD-------------------PPRPPCRLHERRRSSKKLELELERKGGDTAA-----RGMGIGMASPVSTLE-FVTRG
        T FVQADPS FR IVQ+LTGAP D                   P +P  +LHERR+SSKK+EL++        A     RG    + SPVS L+ F  R 
Subjt:  TTFVQADPSTFRAIVQRLTGAPTD-------------------PPRPPCRLHERRRSSKKLELELERKGGDTAA-----RGMGIGMASPVSTLE-FVTRG

Query:  SP--------CEDQELEDRAIAEKGFYFRPSPR-GSDP-PQLLPLFPI
        SP         +  + E +AIAEKGFYF PSPR GS+P P+LLPLFP+
Subjt:  SP--------CEDQELEDRAIAEKGFYFRPSPR-GSDP-PQLLPLFPI

Arabidopsis top hitse value%identityAlignment
AT1G80450.1 VQ motif-containing protein2.8e-1945.95Show/hide
Query:  TTFVQADPSTFRAIVQRLTGAPTD-------------------PPRPPCRLHERRRSSKKLELELERKGGDTAA-----RGMGIGMASPVSTLE-FVTRG
        T FVQADPS FR IVQ+LTGAP D                   P +P  +LHERR+SSKK+EL++        A     RG    + SPVS L+ F  R 
Subjt:  TTFVQADPSTFRAIVQRLTGAPTD-------------------PPRPPCRLHERRRSSKKLELELERKGGDTAA-----RGMGIGMASPVSTLE-FVTRG

Query:  SP--------CEDQELEDRAIAEKGFYFRPSPR-GSDP-PQLLPLFPI
        SP         +  + E +AIAEKGFYF PSPR GS+P P+LLPLFP+
Subjt:  SP--------CEDQELEDRAIAEKGFYFRPSPR-GSDP-PQLLPLFPI

AT2G33780.1 VQ motif-containing protein2.1e-0629.75Show/hide
Query:  TTFVQADPSTFRAIVQRLTGAPTDPPRPP------------------------CRLHERRRSSKK-LELELERKGGDTAAR-------GMGIGMASPVST
        TTF++ DPS+F+ +VQ LTG P +P   P                         RL ERR S K  L +     G              + +   +P+ +
Subjt:  TTFVQADPSTFRAIVQRLTGAPTDPPRPP------------------------CRLHERRRSSKK-LELELERKGGDTAAR-------GMGIGMASPVST

Query:  LEFVTRGS---------PCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS
          F   GS         P  D + ++R+I EKGFY RPSP  +     P+LL LFP++
Subjt:  LEFVTRGS---------PCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS

AT3G15300.1 VQ motif-containing protein8.0e-0629.21Show/hide
Query:  TTFVQADPSTFRAIVQRLTGAPT----DPPRPPC------------------------RLHERR---------RSSKKLELELERKGGDTAARGM-----
        TTFVQAD S+F+ +VQ LTG+ +    D PRPP                         +L+ERR         ++S  +   +   GG  + R       
Subjt:  TTFVQADPSTFRAIVQRLTGAPT----DPPRPPC------------------------RLHERR---------RSSKKLELELERKGGDTAARGM-----

Query:  ----------GIGMASPVSTLEFVTRG---------SPCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS
                   + + SPV+ L+  T G         SP  +   E+R IA+KG+Y   SP  +     PQLLPLFP++
Subjt:  ----------GIGMASPVSTLEFVTRG---------SPCEDQELEDRAIAEKGFYFRPSPRGS---DPPQLLPLFPIS

AT5G08480.1 VQ motif-containing protein2.9e-0835.57Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTD-----------------PPRPPCRLHERRRSSK-KLELELERKGGDTAARGMGIGMASPVSTLEF
        S + A      TTFVQ D +TFR IVQRLTG PT+                   RP  +LHERR+  + KLE+                 +  P+S    
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTD-----------------PPRPPCRLHERRRSSK-KLELELERKGGDTAARGMGIGMASPVSTLEF

Query:  VTRGSP---CEDQELEDRAIAEKGFYFRPSPR---GSDPPQLLPLFPIS
         T G P     + E E++AI E+ FY  PSPR   G   P+LL LFP++
Subjt:  VTRGSP---CEDQELEDRAIAEKGFYFRPSPR---GSDPPQLLPLFPIS

AT5G08480.2 VQ motif-containing protein2.0e-0934.16Show/hide
Query:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTD-----------------PPRPPCRLHERRRSSK-KLEL------------ELERKGGDTAARGMG
        S + A      TTFVQ D +TFR IVQRLTG PT+                   RP  +LHERR+  + KLE+                K G+T      
Subjt:  SNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTD-----------------PPRPPCRLHERRRSSK-KLEL------------ELERKGGDTAARGMG

Query:  IGMASPVSTLEFVTRGSP---CEDQELEDRAIAEKGFYFRPSPR---GSDPPQLLPLFPIS
        +G  S + +   +  G P     + E E++AI E+ FY  PSPR   G   P+LL LFP++
Subjt:  IGMASPVSTLEFVTRGSP---CEDQELEDRAIAEKGFYFRPSPR---GSDPPQLLPLFPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACTCCGCCGCCGTGCAGTCCACCACCACCACGACCTTCGTCCAAGCCGACCCATCGACCTTCAGAGCAATAGTGCAGAGGCTGACCGGAGCTCCGACCGA
CCCACCAAGGCCGCCGTGTCGGCTCCACGAACGGCGGCGGAGCAGCAAGAAGCTGGAGCTGGAGCTGGAGCGGAAGGGCGGCGACACGGCGGCGAGGGGGATGGGAATCG
GAATGGCGTCGCCGGTGTCGACGCTGGAGTTCGTGACACGTGGGAGTCCGTGTGAAGATCAAGAACTGGAAGACAGAGCGATTGCGGAAAAAGGGTTCTATTTTCGCCCG
AGCCCGAGAGGATCCGACCCGCCTCAACTTTTGCCCTTATTTCCCATTTCTGTAACACCA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAACTCCGCCGCCGTGCAGTCCACCACCACCACGACCTTCGTCCAAGCCGACCCATCGACCTTCAGAGCAATAGTGCAGAGGCTGACCGGAGCTCCGACCGA
CCCACCAAGGCCGCCGTGTCGGCTCCACGAACGGCGGCGGAGCAGCAAGAAGCTGGAGCTGGAGCTGGAGCGGAAGGGCGGCGACACGGCGGCGAGGGGGATGGGAATCG
GAATGGCGTCGCCGGTGTCGACGCTGGAGTTCGTGACACGTGGGAGTCCGTGTGAAGATCAAGAACTGGAAGACAGAGCGATTGCGGAAAAAGGGTTCTATTTTCGCCCG
AGCCCGAGAGGATCCGACCCGCCTCAACTTTTGCCCTTATTTCCCATTTCTGTAACACCA
Protein sequenceShow/hide protein sequence
MASNSAAVQSTTTTTFVQADPSTFRAIVQRLTGAPTDPPRPPCRLHERRRSSKKLELELERKGGDTAARGMGIGMASPVSTLEFVTRGSPCEDQELEDRAIAEKGFYFRP
SPRGSDPPQLLPLFPISVTP