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MS009406 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009406
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransmembrane protein, putative
Genome locationscaffold813:1115556..1115696
RNA-Seq ExpressionMS009406
SyntenyMS009406
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593392.1 hypothetical protein SDJN03_12868, partial [Cucurbita argyrosperma subsp. sororia]4.9e-1693.48Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
XP_022145821.1 uncharacterized protein LOC111015178 [Momordica charantia]5.2e-18100Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
XP_022959617.1 uncharacterized protein LOC111460643 isoform X1 [Cucurbita moschata]4.9e-1693.48Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
XP_023004358.1 uncharacterized protein LOC111497700 isoform X1 [Cucurbita maxima]4.9e-1693.48Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
XP_038899182.1 uncharacterized protein LOC120086544 [Benincasa hispida]1.1e-1591.3Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPA  SKF+DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
TrEMBL top hitse value%identityAlignment
A0A0A0K8T0 Uncharacterized protein1.5e-1587.23Show/hide
Query:  TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        TG PA FSKF+DRVQIF AVLFWMSLFFWTS LDG+NRPNKGSRFRR
Subjt:  TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
A0A1S3CE06 uncharacterized protein LOC1034997986.9e-1689.36Show/hide
Query:  TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        TG PA FSKF+DRVQIF AVLFWMSLFFWTS LDGKNRPNKGSRFRR
Subjt:  TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
A0A6J1CXJ1 uncharacterized protein LOC1110151782.5e-18100Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
A0A6J1H516 uncharacterized protein LOC111460643 isoform X12.4e-1693.48Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
A0A6J1KZ93 uncharacterized protein LOC111497700 isoform X12.4e-1693.48Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
        GFPA FSKF DRVQIFFAVLFWMSLFFWTS LDGKNRPNKGSRFRR
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52550.1 unknown protein1.7e-0652.27Show/hide
Query:  SKFQDRVQIFFAVLFWMSLFFWTSVLDGK-----NRPNKGSRFR
        S  QDRV+IF +VL W+SLFFW S L G+      +  KGSRF+
Subjt:  SKFQDRVQIFFAVLFWMSLFFWTSVLDGK-----NRPNKGSRFR
AT3G15780.1 unknown protein1.5e-0753.19Show/hide
Query:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLD--GKNRPNKGSRFR
        G     ++ QDRV+IF AV FWM LFFW +V D  GK +  KGSRF+
Subjt:  GFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLD--GKNRPNKGSRFR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACAGGTTTCCCAGCATTTTTCTCAAAATTTCAGGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCAGTATTGGATGGAAAAAA
TAGACCCAATAAGGGCTCTCGATTTAGACGA
mRNA sequenceShow/hide mRNA sequence
ACAGGTTTCCCAGCATTTTTCTCAAAATTTCAGGACAGAGTACAGATTTTCTTTGCTGTGTTATTCTGGATGTCCCTCTTCTTCTGGACTTCAGTATTGGATGGAAAAAA
TAGACCCAATAAGGGCTCTCGATTTAGACGA
Protein sequenceShow/hide protein sequence
TGFPAFFSKFQDRVQIFFAVLFWMSLFFWTSVLDGKNRPNKGSRFRR