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MS009407 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009407
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold813:1118330..1118527
RNA-Seq ExpressionMS009407
SyntenyMS009407
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058756.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa]5.8e-2377.27Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC NKCM+CRPCMAA VVPVHR+KG      SS  EEEDSYYLLSWKC+CGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

KAE8646441.1 hypothetical protein Csa_015844 [Cucumis sativus]1.2e-2378.79Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC+NKCM+CRPCMAA VVPVHR+KG      SS  EEEDSYYLLSWKCRCGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

KAG6593393.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]4.5e-2380.3Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGCENKC SCRPCMAA VVP HR K FKA   SS G E+DSYYLLSWKCRCGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

KAG7025740.1 Polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-2380.3Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGCENKC SCRPCMAA VVP HR K FKA   SS G E+DSYYLLSWKCRCGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

XP_008461115.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]3.4e-2377.27Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC+NKCM+CRPCMAA VVPVHR+KG      SS  EEEDSYYLLSWKC+CGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

TrEMBL top hitse value%identityAlignment
A0A0A0K6C2 Epidermal patterning factor-like protein5.7e-2478.79Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC+NKCM+CRPCMAA VVPVHR+KG      SS  EEEDSYYLLSWKCRCGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

A0A1S3CDZ4 Epidermal patterning factor-like protein1.7e-2377.27Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC+NKCM+CRPCMAA VVPVHR+KG      SS  EEEDSYYLLSWKC+CGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

A0A5D3CGR2 Epidermal patterning factor-like protein2.8e-2377.27Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC NKCM+CRPCMAA VVPVHR+KG      SS  EEEDSYYLLSWKC+CGN IYQP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

A0A6J5WNH8 Epidermal patterning factor-like protein3.4e-2168.18Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC+NKC++CRPC+A +V+PVH+ K F     SS GEE+DSYYLLSWKCRCGN ++QP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

M5WXF1 Epidermal patterning factor-like protein3.4e-2168.18Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        KMV+GSRPPGC+NKC++CRPC+A +V+PVH+ K F     SS GEE+DSYYLLSWKCRCGN ++QP
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

SwissProt top hitse value%identityAlignment
P43212 Polygalacturonase1.5e-0536.36Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        ++++GSRPP C NKC  C PC A +V+ VHR+                 YY   W C     IY P
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

Q1G3V9 EPIDERMAL PATTERNING FACTOR-like protein 82.6e-0529.69Show/hide
Query:  VVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        V+GS PP C  KC +C+PC+  +         F    +    ++ + YY + W CRC + +++P
Subjt:  VVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 11.1e-0530.77Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRG------------EEEDSYYLLSWKCRCGNNIYQP
        K  +GS PP C N+C +C PCMA  V  +     F  +   S G            ++  +Y  + WKC C  + Y P
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRG------------EEEDSYYLLSWKCRCGNNIYQP

Q9T068 EPIDERMAL PATTERNING FACTOR-like protein 21.6e-0737.66Show/hide
Query:  VVGSRPPGCEN-KCMSCRPCMAAVVVPVHRVKGFKAMYSSS------------RGEEEDSYYLLSWKCRCGNNIYQP
        ++GSRPP CE  +C SC  C A  V    + K    + +SS            RG++  +Y  +SWKC+CGN+IY P
Subjt:  VVGSRPPGCEN-KCMSCRPCMAAVVVPVHRVKGFKAMYSSS------------RGEEEDSYYLLSWKCRCGNNIYQP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein1.8e-0629.69Show/hide
Query:  VVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP
        V+GS PP C  KC +C+PC+  +         F    +    ++ + YY + W CRC + +++P
Subjt:  VVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP

AT3G13898.1 unknown protein2.2e-0430.36Show/hide
Query:  VGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRC
        +GS+PP CE KC  C PC A     +  +      Y++ + E         W+C C
Subjt:  VGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRC

AT4G37810.1 unknown protein1.1e-0837.66Show/hide
Query:  VVGSRPPGCEN-KCMSCRPCMAAVVVPVHRVKGFKAMYSSS------------RGEEEDSYYLLSWKCRCGNNIYQP
        ++GSRPP CE  +C SC  C A  V    + K    + +SS            RG++  +Y  +SWKC+CGN+IY P
Subjt:  VVGSRPPGCEN-KCMSCRPCMAAVVVPVHRVKGFKAMYSSS------------RGEEEDSYYLLSWKCRCGNNIYQP

AT5G10310.1 unknown protein8.1e-0730.77Show/hide
Query:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRG------------EEEDSYYLLSWKCRCGNNIYQP
        K  +GS PP C N+C +C PCMA  V  +     F  +   S G            ++  +Y  + WKC C  + Y P
Subjt:  KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRG------------EEEDSYYLLSWKCRCGNNIYQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATGGTGGTGGGTTCGAGGCCGCCCGGGTGCGAGAACAAGTGCATGAGTTGCAGGCCGTGCATGGCGGCGGTGGTGGTGCCGGTGCACCGGGTAAAGGGTTTTAAGGC
TATGTACTCCTCCTCTCGCGGTGAGGAAGAGGATAGCTATTATTTGCTGTCATGGAAATGTAGATGTGGGAATAACATCTATCAACCC
mRNA sequenceShow/hide mRNA sequence
AAAATGGTGGTGGGTTCGAGGCCGCCCGGGTGCGAGAACAAGTGCATGAGTTGCAGGCCGTGCATGGCGGCGGTGGTGGTGCCGGTGCACCGGGTAAAGGGTTTTAAGGC
TATGTACTCCTCCTCTCGCGGTGAGGAAGAGGATAGCTATTATTTGCTGTCATGGAAATGTAGATGTGGGAATAACATCTATCAACCC
Protein sequenceShow/hide protein sequence
KMVVGSRPPGCENKCMSCRPCMAAVVVPVHRVKGFKAMYSSSRGEEEDSYYLLSWKCRCGNNIYQP