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MS009408 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009408
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold813:1123629..1124380
RNA-Seq ExpressionMS009408
SyntenyMS009408
Gene Ontology termsNA
InterPro domainsIPR025124 - Domain of unknown function DUF4050


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461112.1 PREDICTED: uncharacterized protein LOC103499796 isoform X1 [Cucumis melo]2.1e-4589.9Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSS+STIN MHDPHGSSGNV NPSEF+NHGLLLWNQTRQRW+GNKQSE RA QFQEPKLDWN TYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

XP_008461113.1 PREDICTED: uncharacterized protein LOC103499796 isoform X2 [Cucumis melo]2.1e-4589.9Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSS+STIN MHDPHGSSGNV NPSEF+NHGLLLWNQTRQRW+GNKQSE RA QFQEPKLDWN TYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

XP_008461114.1 PREDICTED: uncharacterized protein LOC103499796 isoform X3 [Cucumis melo]2.1e-4589.9Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSS+STIN MHDPHGSSGNV NPSEF+NHGLLLWNQTRQRW+GNKQSE RA QFQEPKLDWN TYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

XP_022152159.1 uncharacterized protein LOC111019947 [Momordica charantia]7.1e-4996.97Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSSMSTINQMHDPHGSSGNVHN SEFINHGLLLWNQTRQ WSGNK+SENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

XP_038899243.1 uncharacterized protein LOC120086589 [Benincasa hispida]3.9e-4792.93Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSSMSTINQMHDPHGSSGN+ NPSEFINHGLLLWNQTRQRW+GNK+SENRA QFQEPKLDWNATYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

TrEMBL top hitse value%identityAlignment
A0A1S3CDH9 uncharacterized protein LOC103499796 isoform X31.0e-4589.9Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSS+STIN MHDPHGSSGNV NPSEF+NHGLLLWNQTRQRW+GNKQSE RA QFQEPKLDWN TYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

A0A1S3CEF0 uncharacterized protein LOC103499796 isoform X11.0e-4589.9Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSS+STIN MHDPHGSSGNV NPSEF+NHGLLLWNQTRQRW+GNKQSE RA QFQEPKLDWN TYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

A0A1S3CF66 uncharacterized protein LOC103499796 isoform X21.0e-4589.9Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSS+STIN MHDPHGSSGNV NPSEF+NHGLLLWNQTRQRW+GNKQSE RA QFQEPKLDWN TYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

A0A5D3CFJ1 Uncharacterized protein1.0e-4589.9Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSS+STIN MHDPHGSSGNV NPSEF+NHGLLLWNQTRQRW+GNKQSE RA QFQEPKLDWN TYE+LLGSNK FRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

A0A6J1DF76 uncharacterized protein LOC1110199473.4e-4996.97Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        MSSMSTINQMHDPHGSSGNVHN SEFINHGLLLWNQTRQ WSGNK+SENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15350.1 unknown protein1.5e-2860.2Show/hide
Query:  SMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWN-ATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        S+S+ NQ  D   ++ N + P E++N GLLLWNQTR+RW G  +  N     Q  KL+WN ATY++LLGSNKLF QPIPL EMVDFLVD+WEQEGLYD
Subjt:  SMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWN-ATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

AT1G15350.2 unknown protein1.5e-2860.2Show/hide
Query:  SMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWN-ATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        S+S+ NQ  D   ++ N + P E++N GLLLWNQTR+RW G  +  N     Q  KL+WN ATY++LLGSNKLF QPIPL EMVDFLVD+WEQEGLYD
Subjt:  SMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWN-ATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

AT1G15350.3 unknown protein1.5e-2860.2Show/hide
Query:  SMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWN-ATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD
        S+S+ NQ  D   ++ N + P E++N GLLLWNQTR+RW G  +  N     Q  KL+WN ATY++LLGSNKLF QPIPL EMVDFLVD+WEQEGLYD
Subjt:  SMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWN-ATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD

AT3G15770.1 unknown protein6.6e-2960.2Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLY
        +SS+ST N   D  G   + + P+EF+NHGL+LWNQTRQ+W G+K+SE+R S  +EP L+ N TYE+LLGSNK F +PIPL EMV FLV+VWE+EGLY
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLY

AT3G15770.2 unknown protein6.6e-2960.2Show/hide
Query:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLY
        +SS+ST N   D  G   + + P+EF+NHGL+LWNQTRQ+W G+K+SE+R S  +EP L+ N TYE+LLGSNK F +PIPL EMV FLV+VWE+EGLY
Subjt:  MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCAATGAGTACAATCAACCAGATGCACGATCCGCACGGTAGCTCAGGCAATGTACACAATCCTTCGGAGTTTATAAATCATGGCCTTCTTCTGTGGAATCAAAC
TAGGCAACGCTGGTCGGGGAATAAACAGTCCGAGAACCGAGCATCGCAGTTCCAAGAACCCAAGTTAGATTGGAATGCAACCTATGAGAATTTACTAGGGAGCAACAAGC
TATTCCGTCAACCTATCCCACTCGGCGAAATGGTAGATTTTCTTGTGGATGTATGGGAACAAGAAGGGTTGTATGAT
mRNA sequenceShow/hide mRNA sequence
ATGTCATCAATGAGTACAATCAACCAGATGCACGATCCGCACGGTAGCTCAGGCAATGTACACAATCCTTCGGAGTTTATAAATCATGGCCTTCTTCTGTGGAATCAAAC
TAGGCAACGCTGGTCGGGGAATAAACAGTCCGAGAACCGAGCATCGCAGTTCCAAGAACCCAAGTTAGATTGGAATGCAACCTATGAGAATTTACTAGGGAGCAACAAGC
TATTCCGTCAACCTATCCCACTCGGCGAAATGGTAGATTTTCTTGTGGATGTATGGGAACAAGAAGGGTTGTATGAT
Protein sequenceShow/hide protein sequence
MSSMSTINQMHDPHGSSGNVHNPSEFINHGLLLWNQTRQRWSGNKQSENRASQFQEPKLDWNATYENLLGSNKLFRQPIPLGEMVDFLVDVWEQEGLYD