; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009423 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009423
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger CCCH domain-containing protein 39-like
Genome locationscaffold813:1206488..1207720
RNA-Seq ExpressionMS009423
SyntenyMS009423
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135841.1 zinc finger CCCH domain-containing protein 39 isoform X1 [Cucumis sativus]1.4e-7656.79Show/hide
Query:  VPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSNAG
        VPEA G+ P LPP +      S  +P M G V S+R       MPSN  I P NN N+G        +YTP FND R+  PS  GIEF EG+ +   N  
Subjt:  VPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSNAG

Query:  CGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTG
           SN ++VCRLF+  K CAYG +CR+LHEIP+KT DSG SSQNY+V  V  GHVMDR S FD+ +EVR+  +TK+ V  EIPKP   ++RPCYPWQTTG
Subjt:  CGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTG

Query:  HCPYGNACRFIHGETELQKPGSCSVSERGSVGGTS--ATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
         CPYG  CRF HGE ELQK   C+ S+RGSVGG S  ATT+AA EAGL SSR I TDC++KG  + QFF SKE KKLIGIYADWLED
Subjt:  HCPYGNACRFIHGETELQKPGSCSVSERGSVGGTS--ATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED

XP_022145140.1 zinc finger CCCH domain-containing protein 56-like isoform X1 [Momordica charantia]1.9e-16699.31Show/hide
Query:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS
        ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIE HEGRWAGS
Subjt:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS

Query:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
        SNAGCGTSNGIEVCRLFRSGKGCAYGA CRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
Subjt:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW

Query:  QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
        QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
Subjt:  QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED

XP_022145151.1 uncharacterized protein LOC111014652 isoform X2 [Momordica charantia]1.4e-12699.09Show/hide
Query:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS
        ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIE HEGRWAGS
Subjt:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS

Query:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
        SNAGCGTSNGIEVCRLFRSGKGCAYGA CRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
Subjt:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW

Query:  QTTGHCPYGNACRFIHGET
        QTTGHCPYGNACRFIHGET
Subjt:  QTTGHCPYGNACRFIHGET

XP_023513806.1 zinc finger CCCH domain-containing protein 39-like [Cucurbita pepo subsp. pepo]1.2e-7254.95Show/hide
Query:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFND-PRKSSPSCQGIEFHEGRWAG
        +T P  EA G  PPLPP+++ G   S  +P M   VPS         MPSN EI   NN+N+GLH   +   Y  A ND  R   PS +GI+FHE R   
Subjt:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFND-PRKSSPSCQGIEFHEGRWAG

Query:  SS--NAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPC
            N   G S  ++VCR F+    CAYG +CR+LH+IPE T D GFS+QN++V  V SGHVMD +S FD+ +EVR+  +TKI   SEIP P   +TR C
Subjt:  SS--NAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPC

Query:  YPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSG-MKQFFRSKEFKKLIGIYADWLED
        Y WQTTGHC YG  CRF HGE ELQK  SCS SERG VGG SATT AAA AGL  SRGI TDC++KGS  MKQ F+SKE KKLIGIYADWLE+
Subjt:  YPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSG-MKQFFRSKEFKKLIGIYADWLED

XP_038897168.1 zinc finger CCCH domain-containing protein 39-like isoform X1 [Benincasa hispida]9.2e-8159.17Show/hide
Query:  VPEASGDRPPLPPQFSYGPRLSSL-QPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGL-HFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSN
        VPEA GD  PLPP      RL S  QP M  TV S+        MPSN  I P NN NVG  H   +   YTP FND  +  PS  GIEFHEG+ +  S 
Subjt:  VPEASGDRPPLPPQFSYGPRLSSL-QPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGL-HFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSN

Query:  AGC--GTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
          C  GTSN ++VCR F+  + CAYG +CR+LHEIPEKT + G SSQNY+V  V SGHV+DRRS FD+ +EVR+  +TKI V  EIPKP   +TRPCYPW
Subjt:  AGC--GTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW

Query:  QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
        QTTG CPYG  CRF HGE ELQKP  CS ++RGSVGG S TTS   EAGL SS GI TDC++KG  M QFF SKE KKLIGIYADWLED
Subjt:  QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED

TrEMBL top hitse value%identityAlignment
A0A0A0KBW4 Uncharacterized protein6.7e-7756.79Show/hide
Query:  VPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSNAG
        VPEA G+ P LPP +      S  +P M G V S+R       MPSN  I P NN N+G        +YTP FND R+  PS  GIEF EG+ +   N  
Subjt:  VPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSNAG

Query:  CGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTG
           SN ++VCRLF+  K CAYG +CR+LHEIP+KT DSG SSQNY+V  V  GHVMDR S FD+ +EVR+  +TK+ V  EIPKP   ++RPCYPWQTTG
Subjt:  CGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTG

Query:  HCPYGNACRFIHGETELQKPGSCSVSERGSVGGTS--ATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
         CPYG  CRF HGE ELQK   C+ S+RGSVGG S  ATT+AA EAGL SSR I TDC++KG  + QFF SKE KKLIGIYADWLED
Subjt:  HCPYGNACRFIHGETELQKPGSCSVSERGSVGGTS--ATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED

A0A1S4E329 zinc finger CCCH domain-containing protein 39-like3.5e-7054.36Show/hide
Query:  VPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSNAG
        VPEA G+ P LPP +      S  +  M G V S+R       MPSN  I P NN N+G     +  +Y P FND  +  PS  GIEFHEG+ +   N  
Subjt:  VPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSNAG

Query:  CGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTG
           SN ++VCRLF+  K CAYG +CR+LHEIPEKT DSG SSQNY+V          RRS FD+ +EVR+  +TK+ V  EIPKP   + RPCYPWQTTG
Subjt:  CGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTG

Query:  HCPYGNACRFIHGETELQKPGSCSVSERGSVGGTS--ATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
         CPYG  CRF HGE ELQK   CS S+RGSVGG S  ATT+A  EAGL SS+ I TDC++KG  + QFF SKE KKLIGIYADWLED
Subjt:  HCPYGNACRFIHGETELQKPGSCSVSERGSVGGTS--ATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED

A0A6J1CTM2 zinc finger CCCH domain-containing protein 56-like isoform X19.1e-16799.31Show/hide
Query:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS
        ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIE HEGRWAGS
Subjt:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS

Query:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
        SNAGCGTSNGIEVCRLFRSGKGCAYGA CRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
Subjt:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW

Query:  QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
        QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
Subjt:  QTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED

A0A6J1CVH6 uncharacterized protein LOC111014652 isoform X27.0e-12799.09Show/hide
Query:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS
        ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIE HEGRWAGS
Subjt:  ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGS

Query:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
        SNAGCGTSNGIEVCRLFRSGKGCAYGA CRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW
Subjt:  SNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPW

Query:  QTTGHCPYGNACRFIHGET
        QTTGHCPYGNACRFIHGET
Subjt:  QTTGHCPYGNACRFIHGET

A0A6J1HGS0 zinc finger CCCH domain-containing protein 39-like3.2e-7154.36Show/hide
Query:  ITSPVPEASG-----DRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFND-PRKSSPSCQGIEFHE
        +T P  EA G       PPLPP+++ G   S  QP M   VPS         MPSN EI   NN+++GLH   +   Y  A ND  R   PS +GIEFHE
Subjt:  ITSPVPEASG-----DRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFND-PRKSSPSCQGIEFHE

Query:  GRWAGSS--NAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYF
         R       N+  G S  ++VCR F+    CAYG +CR+LH+IPE T D G SSQN++V  V SGHVMD +S FD+ +EVR+  +TKI   SEIP P   
Subjt:  GRWAGSS--NAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYF

Query:  RTRPCYPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSG-MKQFFRSKEFKKLIGIYADWLED
        +TR CY WQTTGHC YG  CRF HGE ELQK  SCS SERG VGG SATT AAA AGL  SRGI TDC++KGS  MKQ F+SKE KKLIGIYADWLE+
Subjt:  RTRPCYPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSG-MKQFFRSKEFKKLIGIYADWLED

SwissProt top hitse value%identityAlignment
A2ZVY5 Zinc finger CCCH domain-containing protein 93.2e-0447.37Show/hide
Query:  EIPKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQ
        E+     F+T  C  W+ TG CPYG+ C+F HG TEL+
Subjt:  EIPKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQ

Q5PP65 Zinc finger CCCH domain-containing protein 285.4e-0724.41Show/hide
Query:  GIEFHEGRWAGSSNAGCGTS-NGIEVCRLFRSGKGCAYGA-KCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEI
        G E    +   SS++  G S    ++C  FR+G  C Y A  C + H           S++  ++      +  +  +E  +++E            ++ 
Subjt:  GIEFHEGRWAGSSNAGCGTS-NGIEVCRLFRSGKGCAYGA-KCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEI

Query:  PKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQK------PGSCSVSERGSVG----GTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEF
         K   ++TR C  WQTTG+CP+G+ C F HG +EL         G C +    ++     G   T ++    G+SS R   +    K +G++   + K  
Subjt:  PKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQK------PGSCSVSERGSVG----GTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEF

Query:  KKLIGIYADWLED
         K+  +Y DW++D
Subjt:  KKLIGIYADWLED

Q84UQ3 Zinc finger CCCH domain-containing protein 568.0e-1125.23Show/hide
Query:  GSSNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCY
        G    G G +     C+ F + +GC YG  C +LH+   K  +S   S +  VGG   G   +       S        +  + +  + KP  ++TR C 
Subjt:  GSSNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCY

Query:  PWQTTGHCPYGNACRFIHGETELQKPGSCSV------------SERGSVGGTSATTSAAAEA-----------GLSSSRGIETDCEDKGSGMKQFFRSKE
         W+ TG+CP+G+ C F HG  EL K G   V            S++  V   +   +AAA             G+ + R      +  G   +   + K 
Subjt:  PWQTTGHCPYGNACRFIHGETELQKPGSCSV------------SERGSVGGTSATTSAAAEA-----------GLSSSRGIETDCEDKGSGMKQFFRSKE

Query:  FKKLIGIYADWLED
          K+  IY DW+++
Subjt:  FKKLIGIYADWLED

Q9LQM3 Zinc finger CCCH domain-containing protein 123.0e-1030.28Show/hide
Query:  SSNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDS-----GFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRT
        SS A  G S     C+ F + +GC YG  C +LH+   +  +S     G        GG   G  +           +   G +      +I KP  ++T
Subjt:  SSNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDS-----GFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRT

Query:  RPCYPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVG
        R C  W+ TG+CP+G  C F HG  EL + G   V E G  G
Subjt:  RPCYPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVG

Q9LT81 Zinc finger CCCH domain-containing protein 396.1e-1126.67Show/hide
Query:  IEVCRLFRSGKGCAYGAKCRYLHE-IPEKTMDSG--FSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISV---HSEIPKPEYFRTRPCYPWQTTG
        +++CR F  G+ C YG +C ++HE + +   DSG    S    VG   +    D  S      EV   G   +     +  + K  Y++TR C  +  TG
Subjt:  IEVCRLFRSGKGCAYGAKCRYLHE-IPEKTMDSG--FSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISV---HSEIPKPEYFRTRPCYPWQTTG

Query:  HCPYGNACRFIHGETELQKP----------GSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
         CP+G+ C F HG+ EL                SV+++  V    A          + S G+     ++G   K   +  + KK+  IY DW++D
Subjt:  HCPYGNACRFIHGETELQKP----------GSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED

Arabidopsis top hitse value%identityAlignment
AT1G32360.1 Zinc finger (CCCH-type) family protein2.2e-1130.28Show/hide
Query:  SSNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDS-----GFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRT
        SS A  G S     C+ F + +GC YG  C +LH+   +  +S     G        GG   G  +           +   G +      +I KP  ++T
Subjt:  SSNAGCGTSNGIEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDS-----GFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRT

Query:  RPCYPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVG
        R C  W+ TG+CP+G  C F HG  EL + G   V E G  G
Subjt:  RPCYPWQTTGHCPYGNACRFIHGETELQKPGSCSVSERGSVG

AT1G68200.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.3e-0431.76Show/hide
Query:  GFSSQNYKVGGVVS-----GHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQ
        G ++Q+ K  G V+     G V   +  + +    +   E +I V  E+      +T  C  WQ TG CPYG+ C+F HG  EL+
Subjt:  GFSSQNYKVGGVVS-----GHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQ

AT1G68200.2 Zinc finger C-x8-C-x5-C-x3-H type family protein7.4e-0453.33Show/hide
Query:  RTRPCYPWQTTGHCPYGNACRFIHGETELQ
        +T  C  WQ TG CPYG+ C+F HG  EL+
Subjt:  RTRPCYPWQTTGHCPYGNACRFIHGETELQ

AT2G35430.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.8e-0824.41Show/hide
Query:  GIEFHEGRWAGSSNAGCGTS-NGIEVCRLFRSGKGCAYGA-KCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEI
        G E    +   SS++  G S    ++C  FR+G  C Y A  C + H           S++  ++      +  +  +E  +++E            ++ 
Subjt:  GIEFHEGRWAGSSNAGCGTS-NGIEVCRLFRSGKGCAYGA-KCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEI

Query:  PKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQK------PGSCSVSERGSVG----GTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEF
         K   ++TR C  WQTTG+CP+G+ C F HG +EL         G C +    ++     G   T ++    G+SS R   +    K +G++   + K  
Subjt:  PKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETELQK------PGSCSVSERGSVG----GTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEF

Query:  KKLIGIYADWLED
         K+  +Y DW++D
Subjt:  KKLIGIYADWLED

AT3G19360.1 Zinc finger (CCCH-type) family protein4.3e-1226.67Show/hide
Query:  IEVCRLFRSGKGCAYGAKCRYLHE-IPEKTMDSG--FSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISV---HSEIPKPEYFRTRPCYPWQTTG
        +++CR F  G+ C YG +C ++HE + +   DSG    S    VG   +    D  S      EV   G   +     +  + K  Y++TR C  +  TG
Subjt:  IEVCRLFRSGKGCAYGAKCRYLHE-IPEKTMDSG--FSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISV---HSEIPKPEYFRTRPCYPWQTTG

Query:  HCPYGNACRFIHGETELQKP----------GSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED
         CP+G+ C F HG+ EL                SV+++  V    A          + S G+     ++G   K   +  + KK+  IY DW++D
Subjt:  HCPYGNACRFIHGETELQKP----------GSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTACTTCTCCGGTCCCTGAGGCTAGTGGCGATCGGCCACCATTGCCTCCTCAATTTTCTTATGGACCACGCCTATCGTCTTTGCAGCCTAGGATGCCTGGAACTGTACC
GAGTTTTAGAATGCCCGTAATTCATGAAGCAATGCCTTCAAATTCTGAGATTTCACCACGGAACAATCTTAACGTTGGGTTACATTTCCGTGGGATGATGCATACATATA
CACCTGCTTTTAATGATCCTCGTAAATCGTCGCCTTCTTGTCAAGGAATTGAGTTCCATGAAGGTCGATGGGCAGGGAGTTCGAATGCTGGCTGTGGAACGTCGAATGGA
ATCGAAGTATGCAGACTGTTCCGTAGCGGGAAGGGGTGTGCATATGGGGCTAAGTGTCGTTACCTTCATGAAATTCCTGAGAAAACTATGGATTCTGGCTTCTCCAGCCA
GAATTATAAGGTGGGAGGTGTAGTTTCTGGTCATGTTATGGATCGAAGAAGTGAGTTTGATAAATCAAAAGAAGTTAGAACAACAGGAGAAACGAAGATTAGTGTACACA
GTGAGATTCCAAAGCCTGAATATTTCAGAACAAGGCCCTGTTACCCCTGGCAGACGACTGGTCACTGCCCATATGGGAATGCCTGTCGCTTTATTCATGGAGAAACAGAA
CTACAGAAGCCTGGATCCTGTAGTGTATCAGAGCGAGGGAGCGTAGGCGGTACCTCTGCGACAACCTCTGCTGCTGCCGAAGCTGGATTATCAAGTAGCCGAGGAATTGA
AACTGACTGTGAGGATAAAGGGTCAGGAATGAAGCAGTTCTTTAGATCAAAGGAGTTTAAGAAGTTGATTGGCATTTATGCTGACTGGCTTGAAGAT
mRNA sequenceShow/hide mRNA sequence
ATTACTTCTCCGGTCCCTGAGGCTAGTGGCGATCGGCCACCATTGCCTCCTCAATTTTCTTATGGACCACGCCTATCGTCTTTGCAGCCTAGGATGCCTGGAACTGTACC
GAGTTTTAGAATGCCCGTAATTCATGAAGCAATGCCTTCAAATTCTGAGATTTCACCACGGAACAATCTTAACGTTGGGTTACATTTCCGTGGGATGATGCATACATATA
CACCTGCTTTTAATGATCCTCGTAAATCGTCGCCTTCTTGTCAAGGAATTGAGTTCCATGAAGGTCGATGGGCAGGGAGTTCGAATGCTGGCTGTGGAACGTCGAATGGA
ATCGAAGTATGCAGACTGTTCCGTAGCGGGAAGGGGTGTGCATATGGGGCTAAGTGTCGTTACCTTCATGAAATTCCTGAGAAAACTATGGATTCTGGCTTCTCCAGCCA
GAATTATAAGGTGGGAGGTGTAGTTTCTGGTCATGTTATGGATCGAAGAAGTGAGTTTGATAAATCAAAAGAAGTTAGAACAACAGGAGAAACGAAGATTAGTGTACACA
GTGAGATTCCAAAGCCTGAATATTTCAGAACAAGGCCCTGTTACCCCTGGCAGACGACTGGTCACTGCCCATATGGGAATGCCTGTCGCTTTATTCATGGAGAAACAGAA
CTACAGAAGCCTGGATCCTGTAGTGTATCAGAGCGAGGGAGCGTAGGCGGTACCTCTGCGACAACCTCTGCTGCTGCCGAAGCTGGATTATCAAGTAGCCGAGGAATTGA
AACTGACTGTGAGGATAAAGGGTCAGGAATGAAGCAGTTCTTTAGATCAAAGGAGTTTAAGAAGTTGATTGGCATTTATGCTGACTGGCTTGAAGAT
Protein sequenceShow/hide protein sequence
ITSPVPEASGDRPPLPPQFSYGPRLSSLQPRMPGTVPSFRMPVIHEAMPSNSEISPRNNLNVGLHFRGMMHTYTPAFNDPRKSSPSCQGIEFHEGRWAGSSNAGCGTSNG
IEVCRLFRSGKGCAYGAKCRYLHEIPEKTMDSGFSSQNYKVGGVVSGHVMDRRSEFDKSKEVRTTGETKISVHSEIPKPEYFRTRPCYPWQTTGHCPYGNACRFIHGETE
LQKPGSCSVSERGSVGGTSATTSAAAEAGLSSSRGIETDCEDKGSGMKQFFRSKEFKKLIGIYADWLED