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MS009426 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009426
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionlate embryogenesis abundant protein 7
Genome locationscaffold813:1221534..1222063
RNA-Seq ExpressionMS009426
SyntenyMS009426
Gene Ontology termsNA
InterPro domainsIPR039624 - Stress-induced protein KIN1/KIN2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3946752.1 hypothetical protein CMV_027014 [Castanea mollissima]5.1e-2568.99Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQN-ASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-----SNNPSN
        MA RQ+I HKAGE+ GQAQ+KKDE L+QAS     + H  SAQN +S+L GQA NFLQQTGEQVK+MAQGAA AVKNTLG+NTDSPNS      +N+PSN
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQN-ASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-----SNNPSN

Query:  TNTAST-NSPSNTNTAS-TNHPSNPSTRI
         NTAS  NSPSN N AS TN+PSNPSTRI
Subjt:  TNTAST-NSPSNTNTAS-TNHPSNPSTRI

XP_008461082.1 PREDICTED: late embryogenesis abundant protein 1 [Cucumis melo]8.2e-2366.4Show/hide
Query:  MAGRQE-ISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSA-QNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-SNNPSNTNT
        MA  Q+ +SHKAGE VGQAQ+KKDE++NQ       + HDQSA Q ASDLK QAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD+ ++P SNNP  TN 
Subjt:  MAGRQE-ISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSA-QNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-SNNPSNTNT

Query:  ASTNSPSNTNTASTNHP-SNPSTRI
         +TN  +N  T  +N+P +NPSTRI
Subjt:  ASTNSPSNTNTASTNHP-SNPSTRI

XP_022151737.1 late embryogenesis abundant protein 7 [Momordica charantia]2.9e-52100Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTAST
        MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTAST
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTAST

Query:  NSPSNTNTASTNHPSNPSTRI
        NSPSNTNTASTNHPSNPSTRI
Subjt:  NSPSNTNTASTNHPSNPSTRI

XP_030973120.1 uncharacterized protein LOC115992998 [Quercus lobata]2.1e-2366.67Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNAS-DLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSN-----NPSN
        MA RQ+I +KAGE+ GQAQ+KKDE+L++AS     + H   AQN+S +L GQA NFLQQTGEQVKNMAQGAA AVKNTLG+NTDSPNS +N     NPSN
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNAS-DLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSN-----NPSN

Query:  TNTAST-NSPSNTNTAST-NHPSNPSTRI
         NTAST N+PS  NT S  N+PSNPSTRI
Subjt:  TNTAST-NSPSNTNTAST-NHPSNPSTRI

XP_038899752.1 late embryogenesis abundant protein 2-like [Benincasa hispida]8.7e-2564.57Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH-----DNASSTHDQS-AQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSN
        MA  Q+ISHKAGE+VGQAQ+KKDE+LNQASH      + +STHDQS AQ AS+LK QAANFLQQTGEQVKNMAQGAA+AVKNTLGMNTD           
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH-----DNASSTHDQS-AQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSN

Query:  TNTASTNSPSNTNTASTNHPSNPSTRI
         NT +TN+P+N      N  +NPSTRI
Subjt:  TNTASTNSPSNTNTASTNHPSNPSTRI

TrEMBL top hitse value%identityAlignment
A0A1S3CF46 late embryogenesis abundant protein 14.0e-2366.4Show/hide
Query:  MAGRQE-ISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSA-QNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-SNNPSNTNT
        MA  Q+ +SHKAGE VGQAQ+KKDE++NQ       + HDQSA Q ASDLK QAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD+ ++P SNNP  TN 
Subjt:  MAGRQE-ISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSA-QNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-SNNPSNTNT

Query:  ASTNSPSNTNTASTNHP-SNPSTRI
         +TN  +N  T  +N+P +NPSTRI
Subjt:  ASTNSPSNTNTASTNHP-SNPSTRI

A0A5D3CF20 Late embryogenesis abundant protein 14.4e-2265.32Show/hide
Query:  MAGRQE-ISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSA-QNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-SNNPSNTNT
        MA  Q+ +SHKAGE VGQAQ+KKDE++NQ       + HDQSA Q ASDLK QAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD+ ++P SNNP+N   
Subjt:  MAGRQE-ISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSA-QNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP-SNNPSNTNT

Query:  ASTNSPSNTNTASTNHPSNPSTRI
          T +PSN      N  +NPSTRI
Subjt:  ASTNSPSNTNTASTNHPSNPSTRI

A0A6J1DEA7 late embryogenesis abundant protein 71.4e-52100Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTAST
        MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTAST
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTAST

Query:  NSPSNTNTASTNHPSNPSTRI
        NSPSNTNTASTNHPSNPSTRI
Subjt:  NSPSNTNTASTNHPSNPSTRI

A0A6J1HHY8 late embryogenesis abundant protein 13.3e-2269.3Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH------DNASSTHDQS--AQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNP
        MA +Q+ISH  GE VGQAQ+KKDEV+NQA++      D+AS+T DQS  AQ ASDLK QAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD   S SN  
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH------DNASSTHDQS--AQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNP

Query:  SNTNTASTNSPSNT
        +NTN   TN+PS T
Subjt:  SNTNTASTNSPSNT

A0A6J1KJU5 late embryogenesis abundant protein 11.2e-2270.18Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH------DNASSTHDQS--AQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNP
        MA +Q+ISH  GEVVGQAQ+KKDEV+NQA++      D+AS+T DQS  AQ ASDLK QAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD   S SN  
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH------DNASSTHDQS--AQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNP

Query:  SNTNTASTNSPSNT
        +NTN   TN+PS T
Subjt:  SNTNTASTNSPSNT

SwissProt top hitse value%identityAlignment
O49816 Late embryogenesis abundant protein 13.0e-0444.59Show/hide
Query:  KAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD
        KA +  G+A+ K  E + Q++ + A S  D S           A FLQQTGE+VK MAQGA +AVK T GM  D
Subjt:  KAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD

O49817 Late embryogenesis abundant protein 23.0e-0441.77Show/hide
Query:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD
        Q    KA +  G+A+ K  E + Q++ + A S  D S           A FLQQTGE+ K MAQGA +AVK T GM  D
Subjt:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTD

Arabidopsis top hitse value%identityAlignment
AT1G15415.1 The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol.8.2e-0535.04Show/hide
Query:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTASTNSPS
        +E S +AG++VGQA +K+++  N +                     QA+ FLQQ GE+VK+MA  A+EAVKN LG+N D      NN    N    +  +
Subjt:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTASTNSPS

Query:  NTNTASTNHPSNPSTRI
          NT S + P +P + I
Subjt:  NTNTASTNHPSNPSTRI

AT1G52680.1 late embryogenesis abundant protein-related / LEA protein-related3.0e-1547.75Show/hide
Query:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH----------DNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN--TDSPNSP
        M+  Q++SH AGEV GQ Q+KK+E LN  SH           + S  H +  QN   L  QA++ +QQTG QVKNMAQGAA+AVKNTLGM+  T+SP+SP
Subjt:  MAGRQEISHKAGEVVGQAQMKKDEVLNQASH----------DNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMN--TDSPNSP

Query:  SNNPSNTNTAS
        +    +    S
Subjt:  SNNPSNTNTAS

AT1G52690.1 Late embryogenesis abundant protein (LEA) family protein1.1e-0437.76Show/hide
Query:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP--SNNPSNTNTAST
        QE + ++ +  G    +  E +   +HD A  T     + A   K + +  L QTGEQVK MA GA +AVK+TLG+ TD  N    S+ PS T T +T
Subjt:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP--SNNPSNTNTAST

AT1G52690.2 Late embryogenesis abundant protein (LEA) family protein1.1e-0437.76Show/hide
Query:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP--SNNPSNTNTAST
        QE + ++ +  G    +  E +   +HD A  T     + A   K + +  L QTGEQVK MA GA +AVK+TLG+ TD  N    S+ PS T T +T
Subjt:  QEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSP--SNNPSNTNTAST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCCGTCAGGAAATCAGCCACAAGGCCGGTGAGGTCGTTGGCCAAGCTCAGATGAAGAAGGATGAGGTCTTGAACCAAGCGTCCCACGACAACGCTTCATCTAC
GCATGATCAATCTGCCCAAAATGCCTCCGACCTTAAGGGCCAAGCTGCAAATTTCCTCCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAGGGAGCGGCTGAGGCTG
TGAAGAACACACTTGGGATGAACACAGATAGCCCAAACAGCCCAAGCAACAACCCTTCCAACACAAACACAGCCAGCACCAACAGTCCTTCCAACACAAACACAGCCAGC
ACCAACCACCCTTCCAATCCATCCACTAGAATT
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGCCGTCAGGAAATCAGCCACAAGGCCGGTGAGGTCGTTGGCCAAGCTCAGATGAAGAAGGATGAGGTCTTGAACCAAGCGTCCCACGACAACGCTTCATCTAC
GCATGATCAATCTGCCCAAAATGCCTCCGACCTTAAGGGCCAAGCTGCAAATTTCCTCCAACAGACTGGAGAGCAAGTGAAGAACATGGCACAGGGAGCGGCTGAGGCTG
TGAAGAACACACTTGGGATGAACACAGATAGCCCAAACAGCCCAAGCAACAACCCTTCCAACACAAACACAGCCAGCACCAACAGTCCTTCCAACACAAACACAGCCAGC
ACCAACCACCCTTCCAATCCATCCACTAGAATT
Protein sequenceShow/hide protein sequence
MAGRQEISHKAGEVVGQAQMKKDEVLNQASHDNASSTHDQSAQNASDLKGQAANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSPNSPSNNPSNTNTASTNSPSNTNTAS
TNHPSNPSTRI