; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009432 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009432
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPlant Tudor-like RNA-binding protein
Genome locationscaffold813:1251928..1252332
RNA-Seq ExpressionMS009432
SyntenyMS009432
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008395 - Agenet-like domain
IPR014002 - Agenet domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152347.1 uncharacterized protein LOC111020085 isoform X1 [Momordica charantia]2.1e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

XP_022152353.1 uncharacterized protein LOC111020085 isoform X2 [Momordica charantia]2.1e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

XP_022152360.1 uncharacterized protein LOC111020085 isoform X3 [Momordica charantia]2.1e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

XP_022152368.1 uncharacterized protein LOC111020085 isoform X4 [Momordica charantia]2.1e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

XP_022152371.1 uncharacterized protein LOC111020085 isoform X5 [Momordica charantia]2.1e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

TrEMBL top hitse value%identityAlignment
A0A6J1DDQ6 uncharacterized protein LOC111020085 isoform X31.0e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

A0A6J1DEN1 uncharacterized protein LOC111020085 isoform X21.0e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

A0A6J1DEP2 uncharacterized protein LOC111020085 isoform X41.0e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

A0A6J1DFY9 uncharacterized protein LOC111020085 isoform X11.0e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

A0A6J1DHI5 uncharacterized protein LOC111020085 isoform X51.0e-72100Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25590.1 Plant Tudor-like protein1.5e-3148.89Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVE-RVPRSAIRPCPPPVEGPNVWAAGDLAEVF-HNFSWKQAKIIKIVGVDS
        MR ++G +VEV S K+ S G W  AEIISGNGHTY+VRY SF +   E VE RVPR  IRPCPP V+  + W AG+L EV  +N SWK A +++++    
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVE-RVPRSAIRPCPPPVEGPNVWAAGDLAEVF-HNFSWKQAKIIKIVGVDS

Query:  YIARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
        Y+ RLLG+  ++ V + +LR RQ+W   +W ++GK
Subjt:  YIARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK

AT4G32440.1 Plant Tudor-like RNA-binding protein2.7e-3347.79Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAV-ERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSY
        MR++KG +VEV S K+   G+W CAEI+SGNGHTY+VR+ SF +  EEAV E+VPR  IRPCPP V+    W  G+L EV  NFSWK A + + +    Y
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAV-ERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSY

Query:  IARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGKVN
        + RLLG+P ++   + +LR R++W   +W  +GK++
Subjt:  IARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGKVN

AT4G32440.2 Plant Tudor-like RNA-binding protein2.7e-3347.79Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAV-ERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSY
        MR++KG +VEV S K+   G+W CAEI+SGNGHTY+VR+ SF +  EEAV E+VPR  IRPCPP V+    W  G+L EV  NFSWK A + + +    Y
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAV-ERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSY

Query:  IARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGKVN
        + RLLG+P ++   + +LR R++W   +W  +GK++
Subjt:  IARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGKVN

AT4G32440.3 Plant Tudor-like RNA-binding protein2.7e-3347.79Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAV-ERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSY
        MR++KG +VEV S K+   G+W CAEI+SGNGHTY+VR+ SF +  EEAV E+VPR  IRPCPP V+    W  G+L EV  NFSWK A + + +    Y
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAV-ERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSY

Query:  IARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGKVN
        + RLLG+P ++   + +LR R++W   +W  +GK++
Subjt:  IARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGKVN

AT5G20030.1 Plant Tudor-like RNA-binding protein1.4e-2945.11Show/hide
Query:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI
        MR  KG +VEVLSK  V  G+W  AEIISGNGH Y+V Y        +  ERVPR ++RP PP ++  + W  GD+ EVF + SWK A + K++G   ++
Subjt:  MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYI

Query:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK
         RLLGS L   V +S +R RQ+W   +W ++G+
Subjt:  ARLLGSPLDVMVCQSHLRTRQAWHGGKWFVLGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACTAAAGAAGGGGGATCAAGTGGAGGTGTTGAGCAAGAAGCAGGTTTCGGGTGGCTCGTGGAGTTGTGCTGAGATTATTTCTGGTAATGGCCATACGTATAGCGT
AAGATATCGTTCGTTTCCGATGACGCCTGAGGAAGCAGTGGAGAGGGTTCCGAGGAGTGCGATTAGGCCCTGTCCGCCCCCGGTCGAAGGGCCAAATGTTTGGGCCGCTG
GTGATCTTGCCGAAGTATTCCACAATTTCTCATGGAAACAAGCAAAAATAATTAAGATTGTTGGAGTTGATAGCTACATAGCAAGACTACTTGGATCACCATTAGACGTA
ATGGTTTGCCAATCTCATCTGAGAACTCGACAGGCTTGGCATGGTGGCAAATGGTTTGTCCTTGGGAAGGTAAAT
mRNA sequenceShow/hide mRNA sequence
ATGAGACTAAAGAAGGGGGATCAAGTGGAGGTGTTGAGCAAGAAGCAGGTTTCGGGTGGCTCGTGGAGTTGTGCTGAGATTATTTCTGGTAATGGCCATACGTATAGCGT
AAGATATCGTTCGTTTCCGATGACGCCTGAGGAAGCAGTGGAGAGGGTTCCGAGGAGTGCGATTAGGCCCTGTCCGCCCCCGGTCGAAGGGCCAAATGTTTGGGCCGCTG
GTGATCTTGCCGAAGTATTCCACAATTTCTCATGGAAACAAGCAAAAATAATTAAGATTGTTGGAGTTGATAGCTACATAGCAAGACTACTTGGATCACCATTAGACGTA
ATGGTTTGCCAATCTCATCTGAGAACTCGACAGGCTTGGCATGGTGGCAAATGGTTTGTCCTTGGGAAGGTAAAT
Protein sequenceShow/hide protein sequence
MRLKKGDQVEVLSKKQVSGGSWSCAEIISGNGHTYSVRYRSFPMTPEEAVERVPRSAIRPCPPPVEGPNVWAAGDLAEVFHNFSWKQAKIIKIVGVDSYIARLLGSPLDV
MVCQSHLRTRQAWHGGKWFVLGKVN