CuGenDBv2

Gene ID	MS009434
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	(6-4)DNA photolyase
Genome location	scaffold813:1258720..1259058
RNA-Seq Expression	MS009434
Synteny	MS009434
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022150506.1 uncharacterized protein LOC111018639 [Momordica charantia]

5.2e-56

100

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIA
        MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIA
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIA

Query:  SRLASDLSDRSAK
        SRLASDLSDRSAK
Subjt:  SRLASDLSDRSAK

XP_022960101.1 uncharacterized protein LOC111460952 [Cucurbita moschata]

1.5e-42

80.51

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI
        MATNLPVFH  PIRA  SSS KSEPNRRKAAAPKWWSPIFGWSSEPDY+  SA       A+PE + GR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRS
        MYHSAIASRLASDLSDRS
Subjt:  MYHSAIASRLASDLSDRS

XP_023004861.1 uncharacterized protein LOC111498038 [Cucurbita maxima]

1.1e-42

80.51

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI
        MATNLPVFH  PIRA  SSS KSEPNRRKAAAPKWWSPIFGWSSEPDY+  SA       A+PE + GR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRS
        MYHSAIASRLASDLSDRS
Subjt:  MYHSAIASRLASDLSDRS

XP_023514525.1 uncharacterized protein LOC111778781 [Cucurbita pepo subsp. pepo]

1.9e-42

80.51

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI
        MATNLPVFH  PIRA  SSS KSEPNRRKAAAPKWWSPIFGWSSEPDY+  SA       A+PE + GR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRS
        MYHSAIASRLASDLSDRS
Subjt:  MYHSAIASRLASDLSDRS

XP_038898524.1 uncharacterized protein LOC120086132 [Benincasa hispida]

3.5e-44

83.33

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI
        MATNL VFHP PIRA  SSS KSEPNRRKA APKWWSPIFGWSSEPDYV  SA       AEPE E GR RSRF PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRSAK
        MYHSAIASRLASDLSDRS K
Subjt:  MYHSAIASRLASDLSDRSAK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CEC0 uncharacterized protein LOC103499770

1.2e-42

79.51

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Query:  MATNLPVFHPLPIRASSS-SSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAE--------PEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFH
        MATN  VFHP PIRASSS SS KS+PNRR AA PKWWSPIFGWSSEPDYV  SAAE        PE + GR  SRF PGCFTEEKAKLLRMKTLESSTFH
Subjt:  MATNLPVFHPLPIRASSS-SSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAE--------PEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFH

Query:  DIMYHSAIASRLASDLSDRSAK
        DIMYHSAIASRLASDLSDRS K
Subjt:  DIMYHSAIASRLASDLSDRSAK

A0A5D3CF29 Uncharacterized protein

1.2e-42

79.51

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Query:  MATNLPVFHPLPIRASSS-SSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAE--------PEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFH
        MATN  VFHP PIRASSS SS KS+PNRR AA PKWWSPIFGWSSEPDYV  SAAE        PE + GR  SRF PGCFTEEKAKLLRMKTLESSTFH
Subjt:  MATNLPVFHPLPIRASSS-SSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAE--------PEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFH

Query:  DIMYHSAIASRLASDLSDRSAK
        DIMYHSAIASRLASDLSDRS K
Subjt:  DIMYHSAIASRLASDLSDRSAK

A0A6J1DBP9 uncharacterized protein LOC111018639

2.5e-56

100

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIA
        MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIA
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIA

Query:  SRLASDLSDRSAK
        SRLASDLSDRSAK
Subjt:  SRLASDLSDRSAK

A0A6J1H6P9 uncharacterized protein LOC111460952

7.2e-43

80.51

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI
        MATNLPVFH  PIRA  SSS KSEPNRRKAAAPKWWSPIFGWSSEPDY+  SA       A+PE + GR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRS
        MYHSAIASRLASDLSDRS
Subjt:  MYHSAIASRLASDLSDRS

A0A6J1KTB2 uncharacterized protein LOC111498038

5.5e-43

80.51

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Query:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI
        MATNLPVFH  PIRA  SSS KSEPNRRKAAAPKWWSPIFGWSSEPDY+  SA       A+PE + GR +S+F PGCFTEEKAKLLRMKTLESSTFHDI
Subjt:  MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSA-------AEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDI

Query:  MYHSAIASRLASDLSDRS
        MYHSAIASRLASDLSDRS
Subjt:  MYHSAIASRLASDLSDRS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G52720.1 unknown protein

2.0e-21

54.81

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Query:  IRASS-SSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYV----AGSAAEPEH-ETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASD
        IRASS S S   + NR+K+AA  WW+P+FG  S+PDY+    + S   P+  +      +F  GCFTEEKAK LR KT E+STFHD+MYHSAIASRLASD
Subjt:  IRASS-SSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYV----AGSAAEPEH-ETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASD

Query:  LSDR
        ++ R
Subjt:  LSDR

AT3G15630.1 unknown protein

3.8e-20

53.19

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Query:  ASSSSSAKSEPNRRK-AAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDL
        +S  +S++S+P R+K  ++  WW+P+FG SSEPDYV       E +  +   R    C TEEKAK LR KT E+STFHD+MYHSAIASRLASD+
Subjt:  ASSSSSAKSEPNRRK-AAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDL

Sequences

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CDS sequence

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ATGGCGACCAATCTCCCCGTTTTCCACCCCCTTCCGATCAGAGCTTCTTCTTCTTCCTCTGCAAAATCCGAGCCTAATCGCCGGAAGGCCGCCGCGCCGAAGTGGTGGTC
ACCGATCTTCGGATGGTCGTCCGAGCCGGACTACGTCGCCGGTTCCGCCGCCGAGCCGGAGCACGAGACCGGACGAGTGAGATCCAGATTCACGCCCGGCTGCTTCACGG
AGGAGAAGGCGAAGCTGCTCCGCATGAAGACGCTGGAGAGCTCCACATTCCATGATATTATGTACCATTCCGCGATCGCGTCGCGTCTCGCCTCCGATTTGTCGGACAGA
TCAGCTAAG

mRNA sequence

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Protein sequence

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MATNLPVFHPLPIRASSSSSAKSEPNRRKAAAPKWWSPIFGWSSEPDYVAGSAAEPEHETGRVRSRFTPGCFTEEKAKLLRMKTLESSTFHDIMYHSAIASRLASDLSDR
SAK

MS009434 (gene) of Bitter gourd (TR) v1 genome