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MS009440 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009440
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L19, chloroplastic-like
Genome locationscaffold813:1295822..1296066
RNA-Seq ExpressionMS009440
SyntenyMS009440
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652777.1 hypothetical protein Csa_022701 [Cucumis sativus]7.3e-2068.49Show/hide
Query:  FKSRPEMQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        +KS  +MQ FRRINQLVRR+ PDA+FK IRGYP+NGD GCSCSAPM MEN F I  LFG  YGS  GSF+ +F
Subjt:  FKSRPEMQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

XP_008462642.1 PREDICTED: 50S ribosomal protein L19, chloroplastic-like isoform X3 [Cucumis melo]1.6e-1974.63Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        MQ FRRINQLVRR+SPDAHFK IRGYP+NGD  CSCSAPMLMEN F I  LFG  YGS SGS   +F
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

XP_022137703.1 50S ribosomal protein L19, chloroplastic-like [Momordica charantia]1.3e-2483.58Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        MQSFRRINQLVRR+SPDAHFKSIRGYP+NGD GCSCSAPM MENGF IAR FGNPYGS +GSF+ +F
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

XP_022154987.1 uncharacterized protein LOC111022131 [Momordica charantia]1.2e-2598.33Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFS
        MQSFRRINQLVRRKSPDAHFKS RGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFS
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFS

XP_038896029.1 uncharacterized protein LOC120084206 [Benincasa hispida]7.3e-2074.63Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        MQ FRRINQLVRR+SPDAHFK IRGYP+NG+ GCSCS PMLMEN  AI+ LFGN Y SFSGS + +F
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

TrEMBL top hitse value%identityAlignment
A0A0A0LV41 Uncharacterized protein3.5e-2068.49Show/hide
Query:  FKSRPEMQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        +KS  +MQ FRRINQLVRR+ PDA+FK IRGYP+NGD GCSCSAPM MEN F I  LFG  YGS  GSF+ +F
Subjt:  FKSRPEMQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

A0A1S3CHC3 50S ribosomal protein L19-2, chloroplastic-like isoform X17.9e-2074.63Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        MQ FRRINQLVRR+SPDAHFK IRGYP+NGD  CSCSAPMLMEN F I  LFG  YGS SGS   +F
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

A0A1S3CHY3 50S ribosomal protein L19, chloroplastic-like isoform X37.9e-2074.63Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        MQ FRRINQLVRR+SPDAHFK IRGYP+NGD  CSCSAPMLMEN F I  LFG  YGS SGS   +F
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

A0A6J1CB38 50S ribosomal protein L19, chloroplastic-like6.2e-2583.58Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF
        MQSFRRINQLVRR+SPDAHFKSIRGYP+NGD GCSCSAPM MENGF IAR FGNPYGS +GSF+ +F
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF

A0A6J1DN60 uncharacterized protein LOC1110221315.6e-2698.33Show/hide
Query:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFS
        MQSFRRINQLVRRKSPDAHFKS RGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFS
Subjt:  MQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTTGTTTCGGTTATGCAGTTTTAAATCTAGACCGGAAATGCAAAGTTTCCGTAGAATTAATCAATTGGTACGAAGGAAAAGTCCAGATGCTCATTTCAAATCGATTAG
AGGATACCCTGTTAATGGAGATGTTGGCTGTAGCTGCTCGGCGCCAATGTTGATGGAAAATGGTTTTGCTATTGCTCGTCTTTTTGGAAATCCATATGGGTCTTTCAGTG
GTTCCTTCATCTCTAACTTC
mRNA sequenceShow/hide mRNA sequence
ATTTTGTTTCGGTTATGCAGTTTTAAATCTAGACCGGAAATGCAAAGTTTCCGTAGAATTAATCAATTGGTACGAAGGAAAAGTCCAGATGCTCATTTCAAATCGATTAG
AGGATACCCTGTTAATGGAGATGTTGGCTGTAGCTGCTCGGCGCCAATGTTGATGGAAAATGGTTTTGCTATTGCTCGTCTTTTTGGAAATCCATATGGGTCTTTCAGTG
GTTCCTTCATCTCTAACTTC
Protein sequenceShow/hide protein sequence
ILFRLCSFKSRPEMQSFRRINQLVRRKSPDAHFKSIRGYPVNGDVGCSCSAPMLMENGFAIARLFGNPYGSFSGSFISNF