; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009454 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009454
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold813:1401203..1402568
RNA-Seq ExpressionMS009454
SyntenyMS009454
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014105.1 Auxin-induced protein AUX22, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-4684.82Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        SKG VVGWPPVCSYRKKNSFG KE +  +NENSKMYVKISMDGAPFLRKLDLGSH+GY DLA+ALEKLFACFGTG      KT KHGESSDYVPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

XP_004135828.1 auxin-induced protein IAA6 [Cucumis sativus]5.2e-4885.09Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNE--NENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYED
        SKG VVGWPPVCSYRK+NSFG KE +   +ENENSKMYVKISMDGAPFLRKLDLGSHKGY DLALALEKLFACFGTG      KTLKHGES DYVPIYED
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNE--NENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYED

Query:  KDGDWMLVGDVPWE
        KDGDWMLVGDVPWE
Subjt:  KDGDWMLVGDVPWE

XP_022151308.1 auxin-induced protein AUX22 [Momordica charantia]1.8e-5392.86Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        SKGHVVGWPPV SYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFG G      KTLKHGESSDYVPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

XP_023549188.1 LOW QUALITY PROTEIN: auxin-induced protein AUX22-like [Cucurbita pepo subsp. pepo]1.7e-4684.82Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        SKG VVGWPPVCSYRKKNSFG KE +  +NENSKMYVKISMDGAPFLRKLDLGSH+GY DLA+ALEKLFACFGTG      KT KHGESSDYVPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

XP_038899110.1 auxin-induced protein AUX22-like [Benincasa hispida]1.4e-4886.49Show/hide
Query:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG
        KG VVGWPPVCSYRKKNSFG KE   +E+ENSKMYVKISMDGAPFLRKLDLGSHKGY DLALAL+KLFACFGTG      KTLKHGESSDYVPIYEDKDG
Subjt:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG

Query:  DWMLVGDVPWE
        DWMLVGDVPWE
Subjt:  DWMLVGDVPWE

TrEMBL top hitse value%identityAlignment
A0A0A0KC02 Auxin-responsive protein2.5e-4885.09Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNE--NENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYED
        SKG VVGWPPVCSYRK+NSFG KE +   +ENENSKMYVKISMDGAPFLRKLDLGSHKGY DLALALEKLFACFGTG      KTLKHGES DYVPIYED
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNE--NENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYED

Query:  KDGDWMLVGDVPWE
        KDGDWMLVGDVPWE
Subjt:  KDGDWMLVGDVPWE

A0A5D3CGF4 Auxin-responsive protein3.4e-4580Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNE---NENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYE
        SKG VVGWPPVCSYRK+NSFG KE +    +ENENSKMYVKISMDGAPFLRKLDLGSHK Y DLA+ALEKLF CFG+       KTLKHGES DYVPIYE
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNE---NENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYE

Query:  DKDGDWMLVGDVPWE
        DKDGDWMLVGDVPWE
Subjt:  DKDGDWMLVGDVPWE

A0A6J1DBU7 Auxin-responsive protein8.9e-5492.86Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        SKGHVVGWPPV SYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFG G      KTLKHGESSDYVPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

A0A6J1GPU1 Auxin-responsive protein2.4e-4683.93Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        SKG VVGWPPVCSYRKKNSFG KE +  +NENSKMYVKISMDGAPFLRKLDLGSH+GY DLA+ALEKLF CFGTG      KT KHGESSDYVPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

A0A6J1JTD7 Auxin-responsive protein6.9e-4683.93Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        SKG VVGWPPVCSYRKKNSFG KE +  ++EN KMYVKISMDGAPFLRKLDLGSH+GY DLALALEKLFACFGTG      KT KHGESSDYVPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

SwissProt top hitse value%identityAlignment
O24409 Auxin-responsive protein IAA198.7e-3057.89Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKM---YVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYE
        +K  VVGWPPVCSYRKKNS         E   +K+   YVK+SMDG P+LRK+DLGS +GY DLA AL+KLF   G G        LK G++ +YV IYE
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKM---YVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYE

Query:  DKDGDWMLVGDVPW
        DKDGDWML GDVPW
Subjt:  DKDGDWMLVGDVPW

O24541 Auxin-induced protein 22C2.0e-3461.61Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        +K  VVGWPPVCSYRKKN+     +NE      K+YVK+SMDGAPFLRK+DL  HKGY DLA AL+K F C+G      + + LK  E++++VPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

P13088 Auxin-induced protein AUX221.9e-3766.96Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD
        +K  VVGWPPVCSYRKKNS     +NE     SKMYVK+SMDGAPFLRK+DLG HKGY DLALAL+KLF C+G      + + LK+ ++S++VPIYEDKD
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKD

Query:  GDWMLVGDVPWE
        GDWMLVGDVPWE
Subjt:  GDWMLVGDVPWE

P49680 Auxin-induced protein IAA63.4e-3463.96Show/hide
Query:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG
        K  VVGWPPVCSYRKKN           NE SKMY+K+SMDGAP+LRK+DL  HKGY +LALALEKLF C G      + + LK  E+ ++VPIYEDKDG
Subjt:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG

Query:  DWMLVGDVPWE
        DWMLVGDVPWE
Subjt:  DWMLVGDVPWE

Q38822 Auxin-responsive protein IAA38.1e-2854.95Show/hide
Query:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG
        K  +VGWPPV SYRK N    K  NE+E+E   +YVK+SMDGAP+LRK+DL  +KGY +L  ALE +F  F  G++          + SD+VP YEDKDG
Subjt:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG

Query:  DWMLVGDVPWE
        DWML+GDVPWE
Subjt:  DWMLVGDVPWE

Arabidopsis top hitse value%identityAlignment
AT1G04240.1 AUX/IAA transcriptional regulator family protein5.8e-2954.95Show/hide
Query:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG
        K  +VGWPPV SYRK N    K  NE+E+E   +YVK+SMDGAP+LRK+DL  +KGY +L  ALE +F  F  G++          + SD+VP YEDKDG
Subjt:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG

Query:  DWMLVGDVPWE
        DWML+GDVPWE
Subjt:  DWMLVGDVPWE

AT1G15580.1 indole-3-acetic acid inducible 51.2e-2654.95Show/hide
Query:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG
        K  VVGWPPVCSYR+KNS                YVK+S+DGA FLRK+DL  +K Y DLA AL+ LF C     ++    TLK    S+ VPIYEDKDG
Subjt:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG

Query:  DWMLVGDVPWE
        DWML GDVPWE
Subjt:  DWMLVGDVPWE

AT1G52830.1 indole-3-acetic acid 63.2e-2750.45Show/hide
Query:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG
        K   VGWPPVCSYR+K        N  E   +  YVK+SMDG P++RK+DLGS   Y +L   LE LF C G G         K G+  +Y+ IYEDKD 
Subjt:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG

Query:  DWMLVGDVPWE
        DWMLVGDVPW+
Subjt:  DWMLVGDVPWE

AT3G15540.1 indole-3-acetic acid inducible 196.2e-3157.89Show/hide
Query:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKM---YVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYE
        +K  VVGWPPVCSYRKKNS         E   +K+   YVK+SMDG P+LRK+DLGS +GY DLA AL+KLF   G G        LK G++ +YV IYE
Subjt:  SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKM---YVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYE

Query:  DKDGDWMLVGDVPW
        DKDGDWML GDVPW
Subjt:  DKDGDWMLVGDVPW

AT5G43700.1 AUX/IAA transcriptional regulator family protein3.2e-2752.25Show/hide
Query:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG
        K  +VGWPPV SYRK     N +  ++E+E    YVK+SMDGAP+LRK+DL  +K YP+L  +LE +F  F  G++       +  + SD+VP YEDKDG
Subjt:  KGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDG

Query:  DWMLVGDVPWE
        DWMLVGDVPWE
Subjt:  DWMLVGDVPWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTAAGGGCCACGTCGTCGGGTGGCCACCGGTGTGTTCGTATCGGAAAAAGAATAGCTTTGGAAATAAGGAGTTGAACGAGAACGAGAACGAGAACTCGAAAATGTACGT
GAAGATTAGCATGGATGGAGCTCCATTTCTTCGTAAGCTTGACTTGGGTTCCCATAAAGGATACCCGGATCTTGCCCTCGCTCTTGAGAAGCTTTTTGCTTGCTTTGGAA
CTGGTAAATTTTTAATCCTTTGGAAGACATTAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAAGATGGGGACTGGATGCTTGTGGGAGACGTTCCT
TGGGAG
mRNA sequenceShow/hide mRNA sequence
AGTAAGGGCCACGTCGTCGGGTGGCCACCGGTGTGTTCGTATCGGAAAAAGAATAGCTTTGGAAATAAGGAGTTGAACGAGAACGAGAACGAGAACTCGAAAATGTACGT
GAAGATTAGCATGGATGGAGCTCCATTTCTTCGTAAGCTTGACTTGGGTTCCCATAAAGGATACCCGGATCTTGCCCTCGCTCTTGAGAAGCTTTTTGCTTGCTTTGGAA
CTGGTAAATTTTTAATCCTTTGGAAGACATTAAAGCATGGAGAAAGTTCTGATTACGTTCCCATTTATGAGGACAAAGATGGGGACTGGATGCTTGTGGGAGACGTTCCT
TGGGAG
Protein sequenceShow/hide protein sequence
SKGHVVGWPPVCSYRKKNSFGNKELNENENENSKMYVKISMDGAPFLRKLDLGSHKGYPDLALALEKLFACFGTGKFLILWKTLKHGESSDYVPIYEDKDGDWMLVGDVP
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