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MS009462 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009462
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionthionin-like protein 2
Genome locationscaffold813:1470672..1470995
RNA-Seq ExpressionMS009462
SyntenyMS009462
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575558.1 hypothetical protein SDJN03_26197, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2764.81Show/hide
Query:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN
        ME+ + K GL   M WL  V S +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI  AAA      R+  N FFC+LGCAA+ CT 
Subjt:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN

Query:  FTTNHNPG
        F+T+ NPG
Subjt:  FTTNHNPG

KAG7014099.1 hypothetical protein SDJN02_24272, partial [Cucurbita argyrosperma subsp. argyrosperma]8.3e-2764.49Show/hide
Query:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN
        ME+ + K GL   M WL  V S +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI  AAA      R+  N FFC+LGCAA+ CT 
Subjt:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN

Query:  FTTNHNP
        F+T+ NP
Subjt:  FTTNHNP

XP_011659556.1 thionin-like protein 2 [Cucumis sativus]6.4e-2763.73Show/hide
Query:  KWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHN
        KW L   M WL + S  ++TA STSFQECYATCFVICAITPG +FS+CPL+CLQACI+PSFPID A        ++  NHFFCKLGCAA+ CT F+T  N
Subjt:  KWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHN

Query:  PG
        PG
Subjt:  PG

XP_022146010.1 thionin-like protein 2 [Momordica charantia]1.8e-5398.13Show/hide
Query:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN
        MENRRGKWGLSTVMVWL VVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPID AAATATAADRRTHNHFFCKLGCAATLCTN
Subjt:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN

Query:  FTTNHNP
        FTTNHNP
Subjt:  FTTNHNP

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]8.3e-2764.49Show/hide
Query:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN
        ME+ + K GL   M WL  V S +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI  AAA      R+  N FFC+LGCAA+ CT 
Subjt:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN

Query:  FTTNHNP
        F+T+ NP
Subjt:  FTTNHNP

TrEMBL top hitse value%identityAlignment
A0A0A0K781 Uncharacterized protein3.1e-2763.73Show/hide
Query:  KWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHN
        KW L   M WL + S  ++TA STSFQECYATCFVICAITPG +FS+CPL+CLQACI+PSFPID A        ++  NHFFCKLGCAA+ CT F+T  N
Subjt:  KWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHN

Query:  PG
        PG
Subjt:  PG

A0A1S3CDU4 thionin-like protein 29.0e-2762.75Show/hide
Query:  KWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHN
        KW L   M WL + S  ++TA STSFQECYATCFVICAITPG +FS+CPL+CLQACI+PSFPID          ++  NHFFCKLGCAA+ CT F+T  N
Subjt:  KWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHN

Query:  PG
        PG
Subjt:  PG

A0A6J1CW29 thionin-like protein 28.6e-5498.13Show/hide
Query:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN
        MENRRGKWGLSTVMVWL VVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPID AAATATAADRRTHNHFFCKLGCAATLCTN
Subjt:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN

Query:  FTTNHNP
        FTTNHNP
Subjt:  FTTNHNP

A0A6J1GMH5 thionin-like protein 24.0e-2764.49Show/hide
Query:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN
        ME+ + K GL   M WL  V S +TTA STSFQECYATCFVICAITPG +FS+CPL+CLQACIIPSFPI  AAA      R+  N FFC+LGCAA+ CT 
Subjt:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN

Query:  FTTNHNP
        F+T+ NP
Subjt:  FTTNHNP

A0A6J1JZ84 thionin-like protein 21.5e-2663.55Show/hide
Query:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN
        ME+ + K GL   M WL  V S +TTA STSFQECYATCF+ICAITPG +FS+CPL+CLQACIIPSFPI  AA  A    R+  N FFC+LGCAA+ CT 
Subjt:  MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTN

Query:  FTTNHNP
        F+T  NP
Subjt:  FTTNHNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACCGGAGAGGGAAGTGGGGTTTAAGTACTGTAATGGTGTGGCTGGCGGTGGTCAGCTCCGTTATGACGACGGCGGAATCCACGTCCTTTCAAGAATGCTACGC
CACCTGCTTCGTCATCTGCGCCATCACCCCCGGCGCCTCCTTCTCCGAATGCCCTCTCAAATGCCTGCAGGCCTGCATCATCCCCTCTTTCCCCATCGACGCCGCCGCCG
CCACCGCCACCGCTGCCGACCGCCGAACGCACAACCATTTCTTCTGCAAGCTCGGCTGCGCAGCTACCTTATGTACCAACTTCACCACCAACCATAACCCAGGT
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACCGGAGAGGGAAGTGGGGTTTAAGTACTGTAATGGTGTGGCTGGCGGTGGTCAGCTCCGTTATGACGACGGCGGAATCCACGTCCTTTCAAGAATGCTACGC
CACCTGCTTCGTCATCTGCGCCATCACCCCCGGCGCCTCCTTCTCCGAATGCCCTCTCAAATGCCTGCAGGCCTGCATCATCCCCTCTTTCCCCATCGACGCCGCCGCCG
CCACCGCCACCGCTGCCGACCGCCGAACGCACAACCATTTCTTCTGCAAGCTCGGCTGCGCAGCTACCTTATGTACCAACTTCACCACCAACCATAACCCAGGT
Protein sequenceShow/hide protein sequence
MENRRGKWGLSTVMVWLAVVSSVMTTAESTSFQECYATCFVICAITPGASFSECPLKCLQACIIPSFPIDAAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPG