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MS009464 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009464
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionthionin-like protein 2
Genome locationscaffold813:1496644..1496922
RNA-Seq ExpressionMS009464
SyntenyMS009464
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593441.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2871.59Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        ++++  +LSLVAG+STASFGKCYAKCF+VCAITPG+P+GTC  KCL DCLF  AS   D N  +DT YFCKLGCATSLCTKFSTK DP
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

KAG7025781.1 Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2871.59Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        ++++  +LSLVAG+STASFGKCYAKCF+VCAITPG+P+GTC  KCL DCLF A++ T D N  +DT YFCKLGCATSLCTKFSTK DP
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

XP_022151472.1 thionin-like protein 2 [Momordica charantia]8.4e-44100Show/hide
Query:  NSELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        NSELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
Subjt:  NSELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

XP_023000407.1 thionin-like protein 2 [Cucurbita maxima]3.8e-2871.59Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        ++++  +LSLVAG+STASFGKCYAKCF+VCAITPG+P+GTC  KCL DCLF  AS   D N  +DT YFCKLGCATSLCTKFSTK DP
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

XP_038899787.1 thionin-like protein 2 [Benincasa hispida]6.9e-3077.27Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        +IL+  ++SLV G+STASFGKCYAKCFVVCAITPGIP+GTC AKCL DCLF  AS+  DFN  +DT YFCKLGCATSLCTKFSTKKDP
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

TrEMBL top hitse value%identityAlignment
A0A067E0U5 Uncharacterized protein3.3e-1752.27Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        L++V L+  L+ G+S A+F +CY  CF++C ITPG  +G+CAAKCL DC+F     T       DT YFCKLGCATSLCT  S+K +P
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

A0A0A0KC18 Uncharacterized protein4.4e-3076.4Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDPG
        ++L+  +LSLVAG+STASFGKCYAKCF+VCAITPGIPVGTC AKCL DCLF  AS+  D N  +DT YFCKLGCATS CTKFSTKKDPG
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDPG

A0A6J1BFU4 thionin-like protein 23.3e-1752.81Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDPG
        +++V LVL L+ G+STASF  CY  CF++C ITP   V +C+ KCL DC+  ++S    F    DT+YFCKLGCATSLCT  S+K++PG
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDPG

A0A6J1DDL8 thionin-like protein 24.1e-44100Show/hide
Query:  NSELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        NSELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
Subjt:  NSELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

A0A6J1KDK0 thionin-like protein 21.8e-2871.59Show/hide
Query:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        ++++  +LSLVAG+STASFGKCYAKCF+VCAITPG+P+GTC  KCL DCLF  AS   D N  +DT YFCKLGCATSLCTKFSTK DP
Subjt:  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

SwissProt top hitse value%identityAlignment
A8MRP4 Thionin-like protein 21.4e-0430.77Show/hide
Query:  LILVMLVLSLVAGKSTAS--FGKCYAKCFVVCAITPGIP-VGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        +++VM++ +L+A  +     F +CY  C V C      P    C   C  +CL + +  +   N+  ++ YFCKLGCAT  C   S+ ++P
Subjt:  LILVMLVLSLVAGKSTAS--FGKCYAKCFVVCAITPGIP-VGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP

Arabidopsis top hitse value%identityAlignment
AT1G12663.1 Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.9.7e-0630.77Show/hide
Query:  LILVMLVLSLVAGKSTAS--FGKCYAKCFVVCAITPGIP-VGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP
        +++VM++ +L+A  +     F +CY  C V C      P    C   C  +CL + +  +   N+  ++ YFCKLGCAT  C   S+ ++P
Subjt:  LILVMLVLSLVAGKSTAS--FGKCYAKCFVVCAITPGIP-VGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATTCAGAGCTTATTTTAGTTATGTTGGTTCTGAGCTTGGTTGCAGGCAAGTCCACAGCCTCATTCGGGAAGTGCTACGCCAAGTGCTTCGTTGTGTGCGCCATCACGCC
GGGCATCCCCGTCGGCACGTGCGCTGCAAAGTGCCTCACAGATTGCCTCTTTCGTGCTGCATCGACCACAGCTGACTTCAACGATCAAATAGACACTCGTTACTTCTGTA
AACTCGGCTGTGCCACTTCCCTCTGCACCAAATTCAGCACCAAGAAAGATCCAGGTTCG
mRNA sequenceShow/hide mRNA sequence
AATTCAGAGCTTATTTTAGTTATGTTGGTTCTGAGCTTGGTTGCAGGCAAGTCCACAGCCTCATTCGGGAAGTGCTACGCCAAGTGCTTCGTTGTGTGCGCCATCACGCC
GGGCATCCCCGTCGGCACGTGCGCTGCAAAGTGCCTCACAGATTGCCTCTTTCGTGCTGCATCGACCACAGCTGACTTCAACGATCAAATAGACACTCGTTACTTCTGTA
AACTCGGCTGTGCCACTTCCCTCTGCACCAAATTCAGCACCAAGAAAGATCCAGGTTCG
Protein sequenceShow/hide protein sequence
NSELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADFNDQIDTRYFCKLGCATSLCTKFSTKKDPGS