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MS009468 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009468
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein SYS1 homolog
Genome locationscaffold813:1546317..1547849
RNA-Seq ExpressionMS009468
SyntenyMS009468
Gene Ontology termsGO:0006895 - Golgi to endosome transport (biological process)
GO:0034067 - protein localization to Golgi apparatus (biological process)
GO:0043001 - Golgi to plasma membrane protein transport (biological process)
GO:0005802 - trans-Golgi network (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR016973 - Integral membrane protein SYS1
IPR019185 - Integral membrane protein SYS1-related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011659561.1 protein SYS1 homolog [Cucumis sativus]1.3e-7394.04Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG VVWDPWLIVAQIVC+QC YY+TLGILLATLVGTRVSRISLVYFFDYATI+VSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDF+ATLYI H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

XP_022143685.1 protein SYS1 homolog [Momordica charantia]1.2e-7699.34Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

XP_022953394.1 protein SYS1 homolog [Cucurbita moschata]1.3e-7394.04Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG VVWDPWLIVAQIVC+QCLYY+TLGIL+ATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGA YLVYLIERAKKCLDF+ATLYI+H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICI+YGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

XP_023547444.1 protein SYS1 homolog [Cucurbita pepo subsp. pepo]1.7e-7393.38Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG VVWDPWLIVAQIVC+QCLYY+TLGIL+ATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGA YL+YLIERAKKCLDF+ATLYI+H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICI+YGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

XP_038898906.1 protein SYS1 homolog [Benincasa hispida]1.5e-7495.36Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG VVWDPWLIVAQIVC+QCLYY+TLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDF+ATLYI H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

TrEMBL top hitse value%identityAlignment
A0A0A0KC23 Protein SYS1 homolog6.2e-7494.04Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG VVWDPWLIVAQIVC+QC YY+TLGILLATLVGTRVSRISLVYFFDYATI+VSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDF+ATLYI H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

A0A1S3CGS5 Protein SYS1 homolog5.2e-7392.72Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG  VWDPWLIVAQIVC+QC YY+TLGI LATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSA+AGAGYLVYLIERAKKCLDF+ATLYI H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICI+YGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

A0A6J1CPG7 Protein SYS1 homolog6.0e-7799.34Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

A0A6J1GPI7 Protein SYS1 homolog6.2e-7494.04Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG VVWDPWLIVAQIVC+QCLYY+TLGIL+ATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGA YLVYLIERAKKCLDF+ATLYI+H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICI+YGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

A0A6J1JZ66 Protein SYS1 homolog1.1e-7393.38Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYG VVWDPWLIVAQIVC+QCLYY+TLGIL+ATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFL+SALAGA YLVYLIERAKKCLDF+ATLYI+H
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LFICI+YGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

SwissProt top hitse value%identityAlignment
A4K2N5 Protein SYS1 homolog1.6e-2343.06Show/hide
Query:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF
        + + VWDP LI++QIV +Q +YY +LG+ LA + G   S  SL   FD   +  ST  G   + SF+L+AL  A  L+Y I R K+CLDF+ T++  HL 
Subjt:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF

Query:  ICIIYGG-WPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPI
         C  Y   +PS++TWW+V    + +M+++GEYLC++ EL+EIP+
Subjt:  ICIIYGG-WPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPI

A4K2W1 Protein SYS1 homolog1.6e-2343.06Show/hide
Query:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF
        + + VWDP LI++QIV +Q +YY +LG+ LA + G   S  SL   FD   +  ST  G   + SF+L+AL  A  L+Y I R K+CLDF+ T++  HL 
Subjt:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF

Query:  ICIIYGG-WPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPI
         C  Y   +PS++TWW+V    + +M+++GEYLC++ EL+EIP+
Subjt:  ICIIYGG-WPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPI

A7S6Y0 Protein SYS1 homolog2.1e-2641.33Show/hide
Query:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF
        + T VWDP LI++QI+ IQC +YI+LG+ +  +     S  SL  FF Y  + +S+  G  ++ +F L++L GA  L ++++RAK+CLDF+ T +I+HL 
Subjt:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF

Query:  ICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSSK
         C IY G+P S TWW++N   L +M+++GE++C+K EL+ I ++   S K
Subjt:  ICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSSK

Q55E69 Protein SYS1 homolog2.2e-2844.22Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFY    WDP LI+ QI+ IQCLYYI L  +L  L     S +SL   F+Y +I   + +G  V+ +FL+++L G+  L Y++ER+KKCLD SAT+  IH
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITR
          I  I  G+P ++ WW +   G+V+M+++GEYLC+++EL +IP+ R
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITR

Q8N2H4 Protein SYS1 homolog1.6e-2343.06Show/hide
Query:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF
        + + VWDP LI++QIV +Q +YY +LG+ LA + G   S  SL   FD   +  ST  G   + SF+L+AL  A  L+Y I R K+CLDF+ T++  HL 
Subjt:  YGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLF

Query:  ICIIYGG-WPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPI
         C  Y   +PS++TWW+V    + +M+++GEYLC++ EL+EIP+
Subjt:  ICIIYGG-WPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPI

Arabidopsis top hitse value%identityAlignment
AT1G79990.1 structural molecules2.4e-6273.51Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYGT VWDPWLIV QI+C+QC YY+TLG+     +G RV R+SLVYFFDYAT+T ST TGW VIASFL S+LAGA Y+++L+ERA+KCLDFSATLYIIH
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS
        LF CI+YGGWPSSM WWVVNGTGL VM+LL EYLCIKRE REIP+ R  S+
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSS

AT1G79990.2 structural molecules3.1e-6274Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYGT VWDPWLIV QI+C+QC YY+TLG+     +G RV R+SLVYFFDYAT+T ST TGW VIASFL S+LAGA Y+++L+ERA+KCLDFSATLYIIH
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS
        LF CI+YGGWPSSM WWVVNGTGL VM+LL EYLCIKRE REIP+ R  S
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS

AT1G79990.4 structural molecules3.1e-6274Show/hide
Query:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH
        MFYGT VWDPWLIV QI+C+QC YY+TLG+     +G RV R+SLVYFFDYAT+T ST TGW VIASFL S+LAGA Y+++L+ERA+KCLDFSATLYIIH
Subjt:  MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIH

Query:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS
        LF CI+YGGWPSSM WWVVNGTGL VM+LL EYLCIKRE REIP+ R  S
Subjt:  LFICIIYGGWPSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTATGGTACAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCATTCAATGCTTGTACTACATTACTCTTGGCATATTGCTGGCGACTCTAGTTGG
GACTCGCGTTTCTCGGATCAGCCTTGTCTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTG
CTGGAGCAGGATATTTGGTTTACTTGATCGAAAGGGCAAAGAAGTGTTTAGATTTTTCAGCCACACTCTATATAATCCACCTTTTCATCTGTATCATATATGGAGGGTGG
CCTTCCTCAATGACGTGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTATGTATCAAACGGGAACTGCGAGAAATTCCCATAACACG
ATTGCGTTCAAGTAAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTATGGTACAGTGGTATGGGACCCTTGGCTCATTGTTGCCCAAATTGTTTGCATTCAATGCTTGTACTACATTACTCTTGGCATATTGCTGGCGACTCTAGTTGG
GACTCGCGTTTCTCGGATCAGCCTTGTCTACTTCTTTGATTATGCTACAATAACCGTTTCTACAGCCACTGGTTGGTGTGTTATTGCTTCATTCCTGCTAAGTGCGCTTG
CTGGAGCAGGATATTTGGTTTACTTGATCGAAAGGGCAAAGAAGTGTTTAGATTTTTCAGCCACACTCTATATAATCCACCTTTTCATCTGTATCATATATGGAGGGTGG
CCTTCCTCAATGACGTGGTGGGTTGTGAATGGTACTGGGCTTGTAGTGATGTCTTTGCTGGGTGAATATCTATGTATCAAACGGGAACTGCGAGAAATTCCCATAACACG
ATTGCGTTCAAGTAAG
Protein sequenceShow/hide protein sequence
MFYGTVVWDPWLIVAQIVCIQCLYYITLGILLATLVGTRVSRISLVYFFDYATITVSTATGWCVIASFLLSALAGAGYLVYLIERAKKCLDFSATLYIIHLFICIIYGGW
PSSMTWWVVNGTGLVVMSLLGEYLCIKRELREIPITRLRSSK