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MS009495 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009495
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c-type biogenesis protein
Genome locationscaffold813:1729378..1730545
RNA-Seq ExpressionMS009495
SyntenyMS009495
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032991 - protein-containing complex (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005616 - CcmH/CycL/Ccl2/NrfF family
IPR038297 - CcmH/CycL/Ccl2/NrfF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149299.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus]4.1e-7588.61Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME+++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDK+IY+KLE+DYGET+LYTPKFDLQTA LWLSPV+VAGAA 
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAY+KHKQ++NVHIMALNLVRGVPLTPKEKQTMLDLL+PPP QRT SSWWR+WRRQ
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

XP_008452301.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo]2.4e-7589.87Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DKEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA 
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAY+KHKQ++NVHIMALNLVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

XP_022152937.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia]4.1e-83100Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

XP_022953979.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucurbita moschata]9.2e-7589.87Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        MES+ DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEI++KLE+DYGET+LYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAY+K+KQK+NVHIMALN+VRGVPLTP+EKQTMLDLL+PPPPQR AS WWR WR Q
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

XP_038904619.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]4.6e-7492.16Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME+++DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DKEIY+KLE+DYGETVLYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWR
        GVWAY+KHKQ++NVHIMALNLVRGVPLTPKEKQTMLDLL+PPP QRT+SSWWR
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWR

TrEMBL top hitse value%identityAlignment
A0A0A0L351 Cytochrome c-type biogenesis protein2.0e-7588.61Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME+++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDK+IY+KLE+DYGET+LYTPKFDLQTA LWLSPV+VAGAA 
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAY+KHKQ++NVHIMALNLVRGVPLTPKEKQTMLDLL+PPP QRT SSWWR+WRRQ
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

A0A1S4DZT6 Cytochrome c-type biogenesis protein1.2e-7589.87Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DKEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA 
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAY+KHKQ++NVHIMALNLVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

A0A5A7TY95 Cytochrome c-type biogenesis protein1.2e-7589.87Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME ++DA+KKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGK+DKEIY+KLE+DYGET+LYTPKFDLQTA LWLSPVLVAGAA 
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAY+KHKQ++NVHIMALNLVRGVPLTPKEKQTMLDLL+PPP QRT SSWWRSWRRQ
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

A0A6J1DHL6 Cytochrome c-type biogenesis protein2.0e-83100Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

A0A6J1JTI4 Cytochrome c-type biogenesis protein4.4e-7589.87Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        MES+ DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEI++KLE+DYGET+LYTPKFDLQTAALWLSPVLVAGAAA
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ
        GVWAY+K+KQK+NVHIMALN+VRGVPLTP+EKQTMLDLL+PPPPQR AS WWR WR Q
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ

SwissProt top hitse value%identityAlignment
B8AFK5 Cytochrome c-type biogenesis CcmH-like mitochondrial protein6.2e-6679.33Show/hide
Query:  SNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGV
        + ++ VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGKSDKEIY+KL+ DYGET+LYTPKFDLQTAA+WLSPV+V G AAGV
Subjt:  SNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGV

Query:  WAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWW
        WAY KH+Q+TNVHIMALNLVRGVPLTP+EK+TMLD+LTPPPP   A+ WW
Subjt:  WAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWW

P45405 Cytochrome c-type biogenesis protein CcmH1.3e-1534.56Show/hide
Query:  DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALW-LSPVLVAGAAAGVWA
        D +      E RAR++S  +RC+ C +QSI+DS A +A  LR L+R+ I +G S+ ++   L   YGE VL  P+F+ QT  LW L P+L+ G    +W 
Subjt:  DAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALW-LSPVLVAGAAAGVWA

Query:  YNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLT
          + + ++   + A       PLTP E+  +  L++
Subjt:  YNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLT

P45406 Cytochrome c-type biogenesis protein CcmH8.5e-1537.14Show/hide
Query:  NDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSP--VLVAGAAAG
        N D V     +EARAR IS  +RC+ C +QSI+DS A++A  LR L+R+ +++G SD+ +   +   YGE VL  P+ + +T  LW  P  +LVAG    
Subjt:  NDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSP--VLVAGAAAG

Query:  VWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTP
        V A  +   +          V G PL+ +EK+ +  LL P
Subjt:  VWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTP

Q6K7S7 Cytochrome c-type biogenesis CcmH-like mitochondrial protein6.2e-6679.33Show/hide
Query:  SNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGV
        + ++ VK+ Q++E+RARNISHNVRC ECGSQSIEDSQADIAILLRKLIRDEI+SGKSDKEIY+KL+ DYGET+LYTPKFDLQTAA+WLSPV+V G AAGV
Subjt:  SNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGV

Query:  WAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWW
        WAY KH+Q+TNVHIMALNLVRGVPLTP+EK+TMLD+LTPPPP   A+ WW
Subjt:  WAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWW

Q9XI46 Cytochrome c-type biogenesis CcmH-like mitochondrial protein2.4e-5468.59Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME  D+  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GK+DKEIY KLED++GETVLY PKFDLQTAALWL+PV++AG  A
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW
            Y KH+ + NV IMALNL+RGVPLTPKE+ T+LD+L PP PP +   S  R W
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW

Arabidopsis top hitse value%identityAlignment
AT1G15220.1 cytochrome c biogenesis protein family1.7e-5568.59Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME  D+  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GK+DKEIY KLED++GETVLY PKFDLQTAALWL+PV++AG  A
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW
            Y KH+ + NV IMALNL+RGVPLTPKE+ T+LD+L PP PP +   S  R W
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW

AT1G15220.2 cytochrome c biogenesis protein family1.7e-5568.59Show/hide
Query:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA
        ME  D+  KK Q+++ARARNISHNVRC ECGSQSIEDSQADIAILLR+LIR+EI +GK+DKEIY KLED++GETVLY PKFDLQTAALWL+PV++AG  A
Subjt:  MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAA

Query:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW
            Y KH+ + NV IMALNL+RGVPLTPKE+ T+LD+L PP PP +   S  R W
Subjt:  GVWAYNKHKQKTNVHIMALNLVRGVPLTPKEKQTMLDLLTPP-PPQRTASSWWRSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGTAACGATGATGCTGTAAAAAAAACACAGTTGGTGGAAGCGCGAGCAAGAAATATTAGTCACAATGTCAGGTGCATTGAGTGCGGGAGTCAATCCATTGAAGA
TTCACAAGCAGATATTGCGATTCTCCTCAGAAAGTTGATCCGTGATGAGATTCGATCTGGGAAATCAGACAAGGAGATCTATAGAAAGCTTGAGGATGATTATGGGGAGA
CGGTCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCATACAATAAGCACAAGCAA
AAGACTAACGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACACCAAAAGAGAAGCAAACTATGTTAGATCTCCTCACACCTCCACCTCCTCAGAGAAC
TGCTTCTTCCTGGTGGAGGAGTTGGCGAAGGCAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGTAACGATGATGCTGTAAAAAAAACACAGTTGGTGGAAGCGCGAGCAAGAAATATTAGTCACAATGTCAGGTGCATTGAGTGCGGGAGTCAATCCATTGAAGA
TTCACAAGCAGATATTGCGATTCTCCTCAGAAAGTTGATCCGTGATGAGATTCGATCTGGGAAATCAGACAAGGAGATCTATAGAAAGCTTGAGGATGATTATGGGGAGA
CGGTCCTTTATACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACCGGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCATACAATAAGCACAAGCAA
AAGACTAACGTTCACATCATGGCTTTAAATCTGGTCAGGGGTGTTCCATTGACACCAAAAGAGAAGCAAACTATGTTAGATCTCCTCACACCTCCACCTCCTCAGAGAAC
TGCTTCTTCCTGGTGGAGGAGTTGGCGAAGGCAA
Protein sequenceShow/hide protein sequence
MESNDDAVKKTQLVEARARNISHNVRCIECGSQSIEDSQADIAILLRKLIRDEIRSGKSDKEIYRKLEDDYGETVLYTPKFDLQTAALWLSPVLVAGAAAGVWAYNKHKQ
KTNVHIMALNLVRGVPLTPKEKQTMLDLLTPPPPQRTASSWWRSWRRQ