; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009524 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009524
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SAWADEE HOMEODOMAIN HOMOLOG 1-like
Genome locationscaffold813:1899428..1902332
RNA-Seq ExpressionMS009524
SyntenyMS009524
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
GO:0003682 - chromatin binding (molecular function)
InterPro domainsIPR032001 - SAWADEE domain
IPR039276 - Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593488.1 Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-11084.52Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPP------SPPPPPPPKLLLYHSDSSFLTDA
        MD+IL+++GDQTLGQ+FFQDVALHFSCSPWRA KS VTAEQV+ WFENR+ E R    SSSKKA PPPPPP      SPPP PPPKLLLYHSDS+FLTD 
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPP------SPPPPPPPKLLLYHSDSSFLTDA

Query:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE
        P+SEPPDS PEFKGKA+DLSELAFEAFSSRDNAWYDVASFL+YRVN HGELDARVRY GFGKDEDEWVNVARGVRERSIPLESSEC+RVKVGDLVLCYRE
Subjt:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE

Query:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        GQDHALYFDAYVVEIQRRLHD GGCRCIFVVRY+HD++E
Subjt:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

KAG7025835.1 Protein SAWADEE HOMEODOMAIN-like 1 [Cucurbita argyrosperma subsp. argyrosperma]8.9e-11185.23Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPP----SPPPPPPPKLLLYHSDSSFLTDAPS
        MD+IL+++GDQTLGQ+FFQDVALHFSCSPWRA KS VTAEQV+ WFENR+ E R    SSSKKA PPPPPP    SPPP PPPKLLLYHSDS+FLTD P+
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPP----SPPPPPPPKLLLYHSDSSFLTDAPS

Query:  SEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQ
        SEPPDS PEFKGKA+DLSELAFEAFSSRDNAWYDVASFL+YRVN HGELDARVRY GFGKDEDEWVNVARGVRERSIPLESSEC+RVKVGDLVLCYREGQ
Subjt:  SEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQ

Query:  DHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        DHALYFDAYVVEIQRRLHD GGCRCIFVVRY+HD++E
Subjt:  DHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

XP_022150667.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Momordica charantia]2.5e-12999.56Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
        MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP

Query:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
        E KGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
Subjt:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA

Query:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
Subjt:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE

XP_023514197.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita pepo subsp. pepo]2.0e-11083.13Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPPSPPPP----------PPPKLLLYHSDSSF
        MD+IL+++GDQTLGQ+FFQDVALHFSCSPWRA KS VTAEQV+ WFENR+ E R    SSSKKA PPPPPP PPPP          PPPKLLLYHSDS+F
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPPSPPPP----------PPPKLLLYHSDSSF

Query:  LTDAPSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVL
        LTD P+SEPPDS PEFKGKA+DLSELAFEAFSSRDNAWYDVASFL+YRVN HGELDARVRY GFGKDEDEWVNVARGVRERSIPLESSEC+RVKVGDLVL
Subjt:  LTDAPSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVL

Query:  CYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        CYREGQDHALYFDAYVVEIQRRLHD GGCRCIFVVRY+HD++E
Subjt:  CYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

XP_038897963.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Benincasa hispida]6.6e-11488.51Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPP------PPPKLLLYHSDSSFLTDAPSSE
        MDNILKD+GDQTLGQEFFQDVALHFSCSPWRAGKS VTAEQV GWFENR+ EL +S KKA PPPPPP PPPP      PPPKLLLYHS+S FLTDAPSSE
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPP------PPPKLLLYHSDSSFLTDAPSSE

Query:  PPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDH
        P    PEFKGKA+DLSELAFEAFSSRD+AWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVR+RSIPLESSECYRVKVGDLVLCYREGQDH
Subjt:  PPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDH

Query:  ALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        ALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHD++E
Subjt:  ALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

TrEMBL top hitse value%identityAlignment
A0A1S3CIG7 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X21.8e-10984.1Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPP----------SPPPPPPPKLLLYHSDSSFLTDA
        MDNILKD+GDQTLGQEFFQDVALHFSCSPWRA KS VTAE V  WFENR+ ELRSSSKKA PPPPPP          SPPP PPPKLLLYHS+S FLT A
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPP----------SPPPPPPPKLLLYHSDSSFLTDA

Query:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE
        PSSEP    PEF GKA+DLSELAFEAFSSRD+AWYDVASFL+YR+NCHGELDARVRYAGFGKDEDEWVNVARGVR+RSIPLESSECYRVKVGDLVLC+RE
Subjt:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE

Query:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
         QDHALYFDAYVVEIQRRLHDIGGCRCIFVVRY+HD++E
Subjt:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

A0A5A7UBT5 Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X21.8e-10984.1Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPP----------SPPPPPPPKLLLYHSDSSFLTDA
        MDNILKD+GDQTLGQEFFQDVALHFSCSPWRA KS VTAE V  WFENR+ ELRSSSKKA PPPPPP          SPPP PPPKLLLYHS+S FLT A
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPP----------SPPPPPPPKLLLYHSDSSFLTDA

Query:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE
        PSSEP    PEF GKA+DLSELAFEAFSSRD+AWYDVASFL+YR+NCHGELDARVRYAGFGKDEDEWVNVARGVR+RSIPLESSECYRVKVGDLVLC+RE
Subjt:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE

Query:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
         QDHALYFDAYVVEIQRRLHDIGGCRCIFVVRY+HD++E
Subjt:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

A0A6J1DBC4 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like1.2e-12999.56Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
        MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP

Query:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
        E KGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
Subjt:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA

Query:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
Subjt:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE

A0A6J1HHW3 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like2.1e-11084.1Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSS-----KKAPPPPPPP-----SPPPPPPPKLLLYHSDSSFLTDA
        MD+IL+++GDQTLGQ+FFQDVALHFSCSPWRA KS VTAEQV+ WFENR+ E RSSS     K  PPPPPPP     SPPP PPPKLLLYHSDS+FLTD 
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSS-----KKAPPPPPPP-----SPPPPPPPKLLLYHSDSSFLTDA

Query:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE
        P+SEPPDS PEFKGKA+DLSELAFEAFSSRDNAWYDVASFL+YRVN HGELDARVRY GFGKDEDEWVNVARGVRERSIPLESSEC+RVKVGDLVLCYRE
Subjt:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE

Query:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        GQDHALYFDAYVVEIQRRLHD GGCRCIFVVRY+HD++E
Subjt:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

A0A6J1KFQ7 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like6.2e-11083.68Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPP------SPPPPPPPKLLLYHSDSSFLTDA
        MD+IL+++GDQTLGQ+FFQDVALHFSCSPWRA KS VTAEQV+ WFENR+ E R    SSSKKA PPP PP      SPPP PPPKLLLYHSDS+FLTD 
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELR----SSSKKAPPPPPPP------SPPPPPPPKLLLYHSDSSFLTDA

Query:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE
        P+SEPPDS PEFKGKA+DLSELAFEAFSSRDNAWYDVASFL+YRVN HGELDARVRY+GFGKDEDEWVNVARGVRERSIPLESSEC+RVKVGDLVLCYRE
Subjt:  PSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYRE

Query:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        GQDHALYFDAYV+EIQRRLHD GGCRCIFVVRY+HD++E
Subjt:  GQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

SwissProt top hitse value%identityAlignment
Q8RWJ7 Protein SAWADEE HOMEODOMAIN HOMOLOG 22.4e-4243.39Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPP-------------PPPPPKLLLYHSDSSFL
        M+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+NR+  LR+   KAP      S P             P   PK      +   +
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPP-------------PPPPPKLLLYHSDSSFL

Query:  TDAPSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLC
        T APS      +P      SD S L FEA S+RD AWYDV +FL++R    G+ + +VR+AGF  +EDEW+NV + VR+RS+P E+SEC  V  GDLVLC
Subjt:  TDAPSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLC

Query:  YREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        ++EG+D ALYFDA V++ QRR HD+ GCRC F+VRY HD  E
Subjt:  YREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

Q9XI47 Protein SAWADEE HOMEODOMAIN HOMOLOG 18.2e-5148.47Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
        M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKSS+T +QV+ WF+ +         K  P PP        P       S+++F+ ++   +      
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP

Query:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
          KGKASDL++LAFEA S+RD AWYDV+SFL+YRV   GEL+ RVR++GF    DEWVNV   VRERSIP+E SEC RV VGDL+LC++E +D ALY D 
Subjt:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA

Query:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        +V+ I+R +HD   C C+F+VRY+ DN E
Subjt:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE

Arabidopsis top hitse value%identityAlignment
AT1G15215.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors5.8e-5248.47Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
        M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKSS+T +QV+ WF+ +         K  P PP        P       S+++F+ ++   +      
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP

Query:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
          KGKASDL++LAFEA S+RD AWYDV+SFL+YRV   GEL+ RVR++GF    DEWVNV   VRERSIP+E SEC RV VGDL+LC++E +D ALY D 
Subjt:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA

Query:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        +V+ I+R +HD   C C+F+VRY+ DN E
Subjt:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE

AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors5.8e-5248.47Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
        M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKSS+T +QV+ WF+ +         K  P PP        P       S+++F+ ++   +      
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP

Query:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
          KGKASDL++LAFEA S+RD AWYDV+SFL+YRV   GEL+ RVR++GF    DEWVNV   VRERSIP+E SEC RV VGDL+LC++E +D ALY D 
Subjt:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA

Query:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        +V+ I+R +HD   C C+F+VRY+ DN E
Subjt:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE

AT1G15215.3 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors5.8e-5248.47Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP
        M+N+ K+ GDQ+L ++F Q VA  FSCS  R GKSS+T +QV+ WF+ +         K  P PP        P       S+++F+ ++   +      
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLP

Query:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA
          KGKASDL++LAFEA S+RD AWYDV+SFL+YRV   GEL+ RVR++GF    DEWVNV   VRERSIP+E SEC RV VGDL+LC++E +D ALY D 
Subjt:  EFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDA

Query:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        +V+ I+R +HD   C C+F+VRY+ DN E
Subjt:  YVVEIQRRLHDIGGCRCIFVVRYDHDNHE

AT3G18380.1 sequence-specific DNA binding transcription factors;sequence-specific DNA binding1.7e-4343.39Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPP-------------PPPPPKLLLYHSDSSFL
        M+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+NR+  LR+   KAP      S P             P   PK      +   +
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPP-------------PPPPPKLLLYHSDSSFL

Query:  TDAPSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLC
        T APS      +P      SD S L FEA S+RD AWYDV +FL++R    G+ + +VR+AGF  +EDEW+NV + VR+RS+P E+SEC  V  GDLVLC
Subjt:  TDAPSSEPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLC

Query:  YREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
        ++EG+D ALYFDA V++ QRR HD+ GCRC F+VRY HD  E
Subjt:  YREGQDHALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE

AT3G18380.3 sequence-specific DNA binding transcription factors;sequence-specific DNA binding2.6e-4444.07Show/hide
Query:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLL------LYHSDSSFLT-DAPSS
        M+ IL        G+   + +A  FS SP R GK  V  +Q+  WF+NR+  LR+   KAP      S P    P  +      L    ++ +T + P  
Subjt:  MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLL------LYHSDSSFLT-DAPSS

Query:  EPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQD
         P  S+P      SD S L FEA S+RD AWYDV +FL++R    G+ + +VR+AGF  +EDEW+NV + VR+RS+P E+SEC  V  GDLVLC++EG+D
Subjt:  EPPDSLPEFKGKASDLSELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQD

Query:  HALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE
         ALYFDA V++ QRR HD+ GCRC F+VRY HD  E
Subjt:  HALYFDAYVVEIQRRLHDIGGCRCIFVVRYDHDNHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATATCTTGAAGGACACTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCACTTCATTTCAGTTGCTCTCCATGGCGCGCTGGAAAATCTTCCGT
CACTGCTGAACAGGTGAAAGGCTGGTTTGAGAATCGGCAAAATGAATTGCGAAGTAGTAGTAAAAAAGCTCCGCCTCCACCTCCACCTCCATCTCCGCCTCCGCCTCCGC
CACCGAAACTTTTGCTTTATCATTCGGATAGTAGTTTTTTAACTGACGCACCTTCATCTGAACCACCTGATAGTCTTCCCGAATTTAAAGGGAAGGCCAGTGACCTTTCA
GAATTGGCATTTGAAGCTTTTTCGTCAAGAGATAATGCATGGTATGACGTTGCTTCATTCCTTAGTTACAGAGTTAATTGCCATGGAGAACTGGATGCTCGAGTTCGATA
TGCTGGCTTTGGAAAGGATGAGGATGAGTGGGTGAATGTTGCAAGAGGAGTTCGTGAGCGGTCCATACCTCTAGAATCTTCAGAGTGTTACAGAGTAAAAGTTGGAGATC
TTGTGTTATGTTACCGGGAAGGACAAGATCATGCACTCTACTTCGACGCATATGTTGTGGAGATTCAAAGGAGGCTGCATGATATCGGGGGTTGCCGATGCATATTCGTG
GTACGGTACGACCATGATAACCATGAGGTA
mRNA sequenceShow/hide mRNA sequence
ATGGACAATATCTTGAAGGACACTGGAGATCAAACACTTGGTCAAGAGTTTTTCCAAGATGTCGCACTTCATTTCAGTTGCTCTCCATGGCGCGCTGGAAAATCTTCCGT
CACTGCTGAACAGGTGAAAGGCTGGTTTGAGAATCGGCAAAATGAATTGCGAAGTAGTAGTAAAAAAGCTCCGCCTCCACCTCCACCTCCATCTCCGCCTCCGCCTCCGC
CACCGAAACTTTTGCTTTATCATTCGGATAGTAGTTTTTTAACTGACGCACCTTCATCTGAACCACCTGATAGTCTTCCCGAATTTAAAGGGAAGGCCAGTGACCTTTCA
GAATTGGCATTTGAAGCTTTTTCGTCAAGAGATAATGCATGGTATGACGTTGCTTCATTCCTTAGTTACAGAGTTAATTGCCATGGAGAACTGGATGCTCGAGTTCGATA
TGCTGGCTTTGGAAAGGATGAGGATGAGTGGGTGAATGTTGCAAGAGGAGTTCGTGAGCGGTCCATACCTCTAGAATCTTCAGAGTGTTACAGAGTAAAAGTTGGAGATC
TTGTGTTATGTTACCGGGAAGGACAAGATCATGCACTCTACTTCGACGCATATGTTGTGGAGATTCAAAGGAGGCTGCATGATATCGGGGGTTGCCGATGCATATTCGTG
GTACGGTACGACCATGATAACCATGAGGTA
Protein sequenceShow/hide protein sequence
MDNILKDTGDQTLGQEFFQDVALHFSCSPWRAGKSSVTAEQVKGWFENRQNELRSSSKKAPPPPPPPSPPPPPPPKLLLYHSDSSFLTDAPSSEPPDSLPEFKGKASDLS
ELAFEAFSSRDNAWYDVASFLSYRVNCHGELDARVRYAGFGKDEDEWVNVARGVRERSIPLESSECYRVKVGDLVLCYREGQDHALYFDAYVVEIQRRLHDIGGCRCIFV
VRYDHDNHEV