; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS009534 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009534
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProfilin
Genome locationscaffold813:1992690..1993779
RNA-Seq ExpressionMS009534
SyntenyMS009534
Gene Ontology termsGO:0042989 - sequestering of actin monomers (biological process)
GO:0005856 - cytoskeleton (cellular component)
GO:0005938 - cell cortex (cellular component)
GO:0003785 - actin monomer binding (molecular function)
InterPro domainsIPR005455 - Profilin
IPR027310 - Profilin conserved site
IPR036140 - Profilin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593495.1 hypothetical protein SDJN03_12971, partial [Cucurbita argyrosperma subsp. sororia]7.1e-6590.84Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQS+SFP FKP+EI+A+MKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +IIGIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

XP_022150558.1 profilin-3 [Momordica charantia]6.2e-6999.24Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLA TGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

XP_022953195.1 profilin-3 [Cucurbita moschata]5.8e-6793.13Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFP FKP+EISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +I+GIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

XP_022964432.1 profilin-3-like [Cucurbita moschata]3.2e-6591.6Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQS+SFP FKP+EI+A+MKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +IIGIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

XP_038899187.1 profilin-3 [Benincasa hispida]2.5e-6593.13Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEGNHLTSAAIIGHD SVWAQSSSFP FK +EISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +IIGIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

TrEMBL top hitse value%identityAlignment
A0A6J1D9R4 Profilin3.0e-6999.24Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLA TGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

A0A6J1GNZ3 Profilin2.8e-6793.13Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFP FKP+EISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +I+GIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

A0A6J1HHT1 Profilin1.6e-6591.6Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHD SVWAQS+SFP FKP+EI+A+MKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +IIGIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

A0A6J1JVP5 Profilin2.8e-6793.13Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQS+SFP FKP+EISAIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+VVRGKKGAGG+TVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +I+GIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

A0A6J1KMJ4 Profilin7.7e-6590.84Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEGNHL+SAAIIGHD SVWAQS+SFP FKP+EI+AIMKD DEPGSLAPTGLHL GTKYMVIQGEPG+VVRGKKGAGGITVKKTEKA
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        +IIGIYDEP+TPGQCNMVVERLGDYLIEQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

SwissProt top hitse value%identityAlignment
A4GFC2 Profilin-43.3e-6584.73Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+IEG HLT+AA+IGHDGSVWAQS++FP FKP+E++AI+KD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKGAGGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        LI GIYDEPLTPGQCN++VERLGDYL+EQGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

Q941H7 Profilin5.7e-6586.26Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMCE +G HLT+AAIIGHDGSVWAQS++FP FKP EI+AIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKG GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        LIIGIYDEP+TPGQCNMVVERLGDYL++QGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

Q9LEI8 Profilin-65.7e-6585.5Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSSSFP FK DE++A+MKD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        LIIGIYDEPLTPGQCNM+VERLGDYL++QGL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

Q9M7M9 Profilin-49.7e-6585.5Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC+I+G+ LT+AAIIGHDGSVWAQSSSFP FK DE++AIMKD DEPGSLAPTGLHLG TKYMVIQGEPG+V+RGKKG+GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        LIIGIYDEPLTPGQCNM+VERLGDYL+EQG+
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

Q9M7N0 Profilin-33.9e-6686.26Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVD+HLMC+I+G+HLT+AAIIGHDGSVWAQSSSFP FKP+E++AIMKD DEPGSLAPTGLHLGGTKYMVIQGEPG+V+RGKKG+GGITVKKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        LIIGIYDEPLTPGQCNM+VERLGDYL+EQG+
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

Arabidopsis top hitse value%identityAlignment
AT2G19760.1 profilin 12.2e-5673.28Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQ+YVDDHLMC++EGNHLT+AAI+G DGSVWAQS+ FP  KP EI  I KD +EPG LAPTGL LGG KYMVIQGE G+V+RGKKG GG+T+KKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        L+ G YDEP+T GQCN+VVERLGDYLIE  L
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

AT2G19770.1 profilin 54.0e-5873.88Show/hide
Query:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT
        MSWQ YVD+HLMC++   +G+HLT+AAIIGHDGSVWAQS++FP FKP EI+ IMKD DEPG LAPTG+ L G KYMVIQGEP +V+RGKKGAGGIT+KKT
Subjt:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT

Query:  EKALIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
         ++++ G+Y+EP+TPGQCNMVVERLGDYLIEQGL
Subjt:  EKALIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

AT4G29340.1 profilin 46.9e-5873.88Show/hide
Query:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT
        MSWQTYVD+HLMC++   +G+HLT+AAI+GHDGSVWAQS++FP FK  E S IMKD DEPG LAPTGL + G KYMVIQGEPG+V+RGKKGAGGIT+KKT
Subjt:  MSWQTYVDDHLMCEI---EGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKT

Query:  EKALIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
         ++ + GIY+EP+TPGQCNMVVERLGDYL+EQGL
Subjt:  EKALIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

AT4G29350.1 profilin 27.6e-5774.81Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQ+YVDDHLMCE+EGNHLT AAI G DGSVWAQSS+FP  KP EI+ I KD +E G LAPTGL LGG KYMV+QGE G+V+RGKKG GG+T+KKT +A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        L+ GIYDEP+T GQCN+VVERLGDYLIE GL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL

AT5G56600.1 profilin 32.9e-5673.28Show/hide
Query:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA
        MSWQTYVDDHLMC++ GN LT+AAI+G DGSVWAQS++FP  KP+EI  I  D   PG+LAPTGL LGG KYMVIQGEP +V+RGKKGAGG+T+KKT  A
Subjt:  MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKA

Query:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL
        L+ GIYDEP+TPGQCNMVVE LG+YLIE GL
Subjt:  LIIGIYDEPLTPGQCNMVVERLGDYLIEQGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTGGCAAACGTACGTCGACGATCACCTCATGTGTGAGATCGAAGGCAACCATCTCACCTCCGCCGCCATCATCGGACACGACGGCAGTGTCTGGGCCCAGAGCTC
CTCCTTCCCTACGTTTAAGCCGGATGAGATTTCGGCTATCATGAAGGATTTGGATGAGCCTGGATCTCTTGCCCCGACTGGATTACATCTTGGTGGCACAAAATACATGG
TTATCCAGGGAGAGCCTGGATCTGTTGTTCGTGGGAAAAAGGGCGCTGGTGGGATCACTGTGAAGAAAACTGAGAAGGCTCTGATTATTGGTATATATGATGAACCTTTG
ACTCCAGGCCAATGCAACATGGTCGTTGAAAGGTTGGGAGACTACCTGATCGAACAGGGTTTG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTGGCAAACGTACGTCGACGATCACCTCATGTGTGAGATCGAAGGCAACCATCTCACCTCCGCCGCCATCATCGGACACGACGGCAGTGTCTGGGCCCAGAGCTC
CTCCTTCCCTACGTTTAAGCCGGATGAGATTTCGGCTATCATGAAGGATTTGGATGAGCCTGGATCTCTTGCCCCGACTGGATTACATCTTGGTGGCACAAAATACATGG
TTATCCAGGGAGAGCCTGGATCTGTTGTTCGTGGGAAAAAGGGCGCTGGTGGGATCACTGTGAAGAAAACTGAGAAGGCTCTGATTATTGGTATATATGATGAACCTTTG
ACTCCAGGCCAATGCAACATGGTCGTTGAAAGGTTGGGAGACTACCTGATCGAACAGGGTTTG
Protein sequenceShow/hide protein sequence
MSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPTFKPDEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKALIIGIYDEPL
TPGQCNMVVERLGDYLIEQGL