CuGenDBv2

Gene ID	MS009540
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytochrome b
Genome location	scaffold813:2112869..2113225
RNA-Seq Expression	MS009540
Synteny	MS009540
Gene Ontology terms	GO:0022904 - respiratory electron transport chain (biological process) GO:1902600 - proton transmembrane transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0045275 - respiratory chain complex III (cellular component) GO:0008121 - ubiquinol-cytochrome-c reductase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR005797 - Cytochrome b/b6, N-terminal IPR016174 - Di-haem cytochrome, transmembrane IPR027387 - Cytochrome b/b6-like domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ACV71595.1 apocytochrome b, partial [Garcinia latissima]

4.5e-58

89.92

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

AHF22747.1 cytochrome b, partial [Fragaria iinumae]

3.5e-58

90.76

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

KAF4609380.1 apocytochrome b [Acer yangbiense]

4.5e-58

89.92

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

QHD18541.1 apocytochrome b [Xanthoceras sorbifolium]

4.5e-58

89.92

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

QRV60027.1 apocytochrome b [Fragaria orientalis]

2.0e-58

91.6

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL GLCLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

TrEMBL top hits

e value

%identity

Alignment

A0A0B4L0J3 Cytochrome b (Fragment)

1.7e-58

90.76

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

A0A6B9CPS0 Cytochrome b

2.2e-58

89.92

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

A0A6B9MNB4 Cytochrome b

2.2e-58

89.92

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

C8YPV2 Cytochrome b (Fragment)

2.2e-58

89.92

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

R4I9B7 Cytochrome b (Fragment)

2.2e-58

89.92

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

SwissProt top hits

e value

%identity

Alignment

P04165 Cytochrome b

2.1e-58

88.24

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFG L G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAF GYV PWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

P0C524 Cytochrome b

1.4e-57

86.55

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFG L G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMF IVV+LHIFRGLY+ASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAF GYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

P29757 Cytochrome b

1.4e-57

86.55

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFG L G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMF IVV+LHIFRGLY+ASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAF GYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

P42792 Cytochrome b

1.6e-58

87.39

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMF IVV+LHIFRGLY+ASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAF GYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

Q9ZZT8 Cytochrome b

1.4e-57

87.39

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFG L G+CLVI+IVT +FLAMH+TPH DLAFNSVEH+M+DVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSP EFV CLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAFTGYV PWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

Arabidopsis top hits

e value

%identity

Alignment

AT2G07727.1 Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal

7.9e-61

89.08

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMFLIVV+LHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAF GYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

ATCG00720.1 photosynthetic electron transfer B

1.7e-15

31.09

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P  ++ ++  G +   C ++++ T   +  ++ P    AF SV++IM +   GWL+R +H   ASM ++++ LH+FR      +  P E  W  GVV+ +
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        L      TGY LPW Q+ +
Subjt:  LMIVTAFTGYVLPWGQMSF

ATMG00220.1 apocytochrome b

7.9e-61

89.08

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Query:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL
        P +LSYWWGFGPL G+CLVI+IVT +FLAMH+TPH DLAFNSVEHIM+DVEGGWLLRYMHANGASMFLIVV+LHIFRGLYHASYSSP EFVWCLGVVIFL
Subjt:  PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFL

Query:  LMIVTAFTGYVLPWGQMSF
        LMIVTAF GYVLPWGQMSF
Subjt:  LMIVTAFTGYVLPWGQMSF

Sequences

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CDS sequence

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CCGTTGTCACTTAGTTATTGGTGGGGGTTCGGTCCGTTAGTAGGTCTTTGTTTAGTCATTCGGATAGTTACTGACATTTTTTTAGCTATGCATTTCACACCTCATGCGGA
TCTAGCTTTCAACAGCGTAGAACACATTATGAAAGATGTTGAAGGGGGCTGGTTGCTCCGTTATATGCATGCTAATGGGGCAAGTATGTTTCTCATTGTGGTTCACCTTC
ATATTTTTCGTGGTCTATATCATGCGAGTTATAGCAGTCCTTGGGAATTTGTTTGGTGTCTCGGAGTTGTAATCTTCCTATTAATGATTGTGACAGCTTTTACAGGATAC
GTACTACCTTGGGGTCAGATGAGTTTT

mRNA sequence

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Protein sequence

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PLSLSYWWGFGPLVGLCLVIRIVTDIFLAMHFTPHADLAFNSVEHIMKDVEGGWLLRYMHANGASMFLIVVHLHIFRGLYHASYSSPWEFVWCLGVVIFLLMIVTAFTGY
VLPWGQMSF

MS009540 (gene) of Bitter gourd (TR) v1 genome