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MS009559 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009559
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold813:2281686..2283626
RNA-Seq ExpressionMS009559
SyntenyMS009559
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462358.1 PREDICTED: uncharacterized protein LOC103500733 isoform X1 [Cucumis melo]7.6e-6278.86Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQ+KQFQ+QHK  DASSS+SSS  +             SSSS PPPQPPKESFARRYKFLWPMLLTVNLAVGAY+F RTKKQ D+HV EEEA PDSAKT 
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

XP_008462359.1 PREDICTED: uncharacterized protein LOC103500733 isoform X2 [Cucumis melo]7.6e-6278.86Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQ+KQFQ+QHK  DASSS+SSS  +             SSSS PPPQPPKESFARRYKFLWPMLLTVNLAVGAY+F RTKKQ D+HV EEEA PDSAKT 
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

XP_022153095.1 uncharacterized protein LOC111020675 [Momordica charantia]2.6e-7895.51Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAK--
        AQVKQFQDQHKVKDA  SSSSSSPAPPPPSAAAPSNMGSSSSSPPPQP KESFARRYKFLWPMLLTVNLA+GAYLFTRTKKQDDDHVIEEEATPDSAK  
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAK--

Query:  -TANTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
         TANTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILKQFIRAKSVPNV
Subjt:  -TANTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

XP_022954191.1 uncharacterized protein LOC111456527 isoform X1 [Cucurbita moschata]2.2e-6180Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQVKQFQ+QHKV  ASSSSS     P PP+++  ++  SSSSS  PQPPKESFARRYKFLWPMLLTVNLAVGAYLF RTKKQ D+ V EEEA PDSAKTA
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EES A+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

XP_022992414.1 uncharacterized protein LOC111488728 isoform X1 [Cucurbita maxima]4.9e-6180.57Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQVKQFQ+QHKV     S+SSSSPAPP  S  A ++  SSSSS  PQPPKESFARRYKFLWPMLLTVNLAVGAYLF RTKKQ D+ V EEEA PDSAKTA
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EES A+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKD EEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

TrEMBL top hitse value%identityAlignment
A0A1S3CGT4 uncharacterized protein LOC103500733 isoform X23.7e-6278.86Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQ+KQFQ+QHK  DASSS+SSS  +             SSSS PPPQPPKESFARRYKFLWPMLLTVNLAVGAY+F RTKKQ D+HV EEEA PDSAKT 
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

A0A1S3CIB4 uncharacterized protein LOC103500733 isoform X13.7e-6278.86Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQ+KQFQ+QHK  DASSS+SSS  +             SSSS PPPQPPKESFARRYKFLWPMLLTVNLAVGAY+F RTKKQ D+HV EEEA PDSAKT 
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

A0A6J1DFU1 uncharacterized protein LOC1110206751.3e-7895.51Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAK--
        AQVKQFQDQHKVKDA  SSSSSSPAPPPPSAAAPSNMGSSSSSPPPQP KESFARRYKFLWPMLLTVNLA+GAYLFTRTKKQDDDHVIEEEATPDSAK  
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAK--

Query:  -TANTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
         TANTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILKQFIRAKSVPNV
Subjt:  -TANTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

A0A6J1GQ86 uncharacterized protein LOC111456527 isoform X11.1e-6180Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQVKQFQ+QHKV  ASSSSS     P PP+++  ++  SSSSS  PQPPKESFARRYKFLWPMLLTVNLAVGAYLF RTKKQ D+ V EEEA PDSAKTA
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EES A+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

E5GCA6 Uncharacterized protein3.7e-6278.86Show/hide
Query:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA
        AQ+KQFQ+QHK  DASSS+SSS  +             SSSS PPPQPPKESFARRYKFLWPMLLTVNLAVGAY+F RTKKQ D+HV EEEA PDSAKT 
Subjt:  AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTA

Query:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
          AAPV+EESLA+PAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKK IDEEKAILK+FIRAKS+PN+
Subjt:  NTAAPVIEESLARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55160.1 unknown protein7.3e-3957.65Show/hide
Query:  QDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTANTAAPV
        Q +H   + ++ +   S  P P +AAA S      S PPP PPKESFARRYK++WP+LLTVNLAVG YLF RTKK+D D V+EE A    AK+++ AAPV
Subjt:  QDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTANTAAPV

Query:  -IEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVP
         +E++L+   + EPV  K REPIP  QQRELFKW+LEEKRK+ PK+ EEKK  DEEKAILKQFI +K++P
Subjt:  -IEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVP

AT1G55160.2 unknown protein1.1e-3965.93Show/hide
Query:  SSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTANTAAPV-IEESLARPAIVEPV--KVREPIPVDQQRELFKWI
        S PPP PPKESFARRYK++WP+LLTVNLAVG YLF RTKK+D D V+EE A    AK+++ AAPV +E++L+   + EPV  K REPIP  QQRELFKW+
Subjt:  SSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTANTAAPV-IEESLARPAIVEPV--KVREPIPVDQQRELFKWI

Query:  LEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVP
        LEEKRK+ PK+ EEKK  DEEKAILKQFI +K++P
Subjt:  LEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVP

AT1G55160.3 unknown protein8.4e-3550.26Show/hide
Query:  QDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVG-------------------------AYLFTRTKK
        Q +H   + ++ +   S  P P +AAA S      S PPP PPKESFARRYK++WP+LLTVNLAVG                         +YLF RTKK
Subjt:  QDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVG-------------------------AYLFTRTKK

Query:  QDDDHVIEEEATPDSAKTANTAAPV-IEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVP
        +D D V+EE A    AK+++ AAPV +E++L+   + EPV  K REPIP  QQRELFKW+LEEKRK+ PK+ EEKK  DEEKAILKQFI +K++P
Subjt:  QDDDHVIEEEATPDSAKTANTAAPV-IEESLARPAIVEPV--KVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVP

AT2G19530.1 unknown protein1.9e-1838.67Show/hide
Query:  SSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDD------------------------HVIEEEAT--PDSAKTANTAAPVIEE-----
        SS    +PP++  ++  K  W   +  NL   AY+F   +++D D                          IE++     D AK A TA P  EE     
Subjt:  SSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDD------------------------HVIEEEAT--PDSAKTANTAAPVIEE-----

Query:  --------------SLARPAIVEPVKV-REPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV
                      S+ +    E VKV R+PIP D+Q+ELFKWILEEKRKI+PKDR+EKK IDEEKAILKQFIRA+ +P +
Subjt:  --------------SLARPAIVEPVKV-REPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCCAGGTTAAGCAATTTCAAGATCAGCACAAGGTCAAGGACGCTTCTTCTTCTTCTTCTTCTTCTTCACCGGCACCACCACCACCGTCGGCTGCCGCACCGTCTAATAT
GGGGTCTTCGAGTTCGTCGCCACCGCCGCAGCCTCCGAAGGAATCGTTTGCCCGGCGATATAAGTTCTTATGGCCCATGCTCTTGACTGTAAACCTTGCTGTTGGAGCTT
ATCTGTTTACGAGGACAAAGAAGCAAGATGATGATCATGTAATTGAAGAAGAGGCCACCCCAGATTCAGCTAAAACTGCTAATACTGCTGCTCCCGTCATTGAGGAATCA
TTGGCCAGACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAACGCGAACTTTTCAAGTGGATCTTGGAAGAAAAGCGCAAGATAAAACC
AAAAGATCGCGAAGAGAAGAAACACATCGATGAAGAGAAAGCCATTCTCAAACAGTTCATCCGAGCAAAATCTGTTCCAAATGTT
mRNA sequenceShow/hide mRNA sequence
GCCCAGGTTAAGCAATTTCAAGATCAGCACAAGGTCAAGGACGCTTCTTCTTCTTCTTCTTCTTCTTCACCGGCACCACCACCACCGTCGGCTGCCGCACCGTCTAATAT
GGGGTCTTCGAGTTCGTCGCCACCGCCGCAGCCTCCGAAGGAATCGTTTGCCCGGCGATATAAGTTCTTATGGCCCATGCTCTTGACTGTAAACCTTGCTGTTGGAGCTT
ATCTGTTTACGAGGACAAAGAAGCAAGATGATGATCATGTAATTGAAGAAGAGGCCACCCCAGATTCAGCTAAAACTGCTAATACTGCTGCTCCCGTCATTGAGGAATCA
TTGGCCAGACCAGCCATTGTGGAGCCTGTGAAGGTAAGAGAACCAATTCCGGTGGACCAGCAACGCGAACTTTTCAAGTGGATCTTGGAAGAAAAGCGCAAGATAAAACC
AAAAGATCGCGAAGAGAAGAAACACATCGATGAAGAGAAAGCCATTCTCAAACAGTTCATCCGAGCAAAATCTGTTCCAAATGTT
Protein sequenceShow/hide protein sequence
AQVKQFQDQHKVKDASSSSSSSSPAPPPPSAAAPSNMGSSSSSPPPQPPKESFARRYKFLWPMLLTVNLAVGAYLFTRTKKQDDDHVIEEEATPDSAKTANTAAPVIEES
LARPAIVEPVKVREPIPVDQQRELFKWILEEKRKIKPKDREEKKHIDEEKAILKQFIRAKSVPNV