CuGenDBv2

Gene ID	MS009578
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Midasin
Genome location	scaffold813:2435914..2436561
RNA-Seq Expression	MS009578
Synteny	MS009578
Gene Ontology terms	GO:0000027 - ribosomal large subunit assembly (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575456.1 Midasin, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-60

84.62

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDG FKLE+ALERFL RCPALTHLS FD LIK+GYAVTEEE LS AAELFLNPNYSI L+GCFRPLAQ I+ RV+GLLRLVPNLRSNS+IT S+IHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        +LNGVVNIIS Y+QRGRGLDLHELACLAFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

KAG7014001.1 Midasin [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-60

84.62

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDG FKLE+ALERFL RCPALTHLS FD LIK+GYAVTEEE LS AAELFLNPNYSI L+GCFRPLAQ I+ RV+GLLRLVPNLRSNS+IT S+IHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        +LNGVVNIIS Y+QRGRGLDLHELACLAFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

XP_022152472.1 midasin isoform X1 [Momordica charantia]

1.9e-71

97.9

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPN+SITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

XP_022152480.1 midasin isoform X2 [Momordica charantia]

1.9e-71

97.9

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPN+SITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

XP_023548564.1 midasin [Cucurbita pepo subsp. pepo]

4.1e-61

86.52

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDG FKLE+ALERFL RCPALTHLS FD LIK+GYAVTEEE LS AAELFLNPNYSI L+GCFRPLAQKI+ RV+GLLRLVPNLRSNS+IT S+IHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLG
        +LNGVVNIIS Y+QRGRGLDLHELACLAFCRALDLAPFLLG
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAY4 Uncharacterized protein

4.7e-55

78.57

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDG FKLESA+ERFL RCP+LTH SPF+ +I++GY VTEEE LS+ AELFLNPNYS+ LLGCFRP+AQKI+ RV+GLLR VPNLRSNS  T S+IHE+
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLL
        +L+GVVNIIS YDQRGRG+DLHELACLAFCRALDLAPFLL
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLL

A0A6J1DE15 Midasin

9.4e-72

97.9

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPN+SITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

A0A6J1DGC5 Midasin

9.4e-72

97.9

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPN+SITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

A0A6J1GQ37 Midasin

7.5e-61

84.62

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDG FKLE+ALERFL RCPALTHLS FD LIK+GYAVTEEE LS AAELFLNPNYSI L+GCFRPLAQKI+ RV+GLLRLVPNLRSNS+I  S+IHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        +LNGVVNIIS Y+QRGRGLDLHELACLAFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

A0A6J1JXY2 Midasin

2.8e-60

83.22

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE
        MAIDG FKLE+ALERFL RCPALTHLS FD LIK+GYAVTEEE LS AAE+FLNPNYSI L+GCFRPLAQKI+ RV+GLLRLVPNLRSNS IT S+IHEE
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEE

Query:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
        +LNGV+NIIS Y+QRGRGLDLHELAC AFCRALDLAPFLLG +
Subjt:  DLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

SwissProt top hits

e value

%identity

Alignment

A0A1P8AUY4 Midasin

3.5e-23

41.1

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPF-DMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDIT--ASKI
        MAIDG F L+ ALE F  RCP +     F  +L K G  V  EE +    + FL+P +++ L+ CF P+ + ++ RVVGLLRLV +L+S+ D +   S +
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPF-DMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDIT--ASKI

Query:  HEEDLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
         +  +   +++I  Y +RG+ L+LHE ACLAF RAL     LLG +
Subjt:  HEEDLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

Arabidopsis top hits

e value

%identity

Alignment

AT1G67120.1 ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding

2.5e-24

41.1

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Query:  MAIDGRFKLESALERFLYRCPALTHLSPF-DMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDIT--ASKI
        MAIDG F L+ ALE F  RCP +     F  +L K G  V  EE +    + FL+P +++ L+ CF P+ + ++ RVVGLLRLV +L+S+ D +   S +
Subjt:  MAIDGRFKLESALERFLYRCPALTHLSPF-DMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDIT--ASKI

Query:  HEEDLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV
         +  +   +++I  Y +RG+ L+LHE ACLAF RAL     LLG +
Subjt:  HEEDLNGVVNIISLYDQRGRGLDLHELACLAFCRALDLAPFLLGFV

Sequences

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CDS sequence

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ATGGCCATTGACGGGAGATTTAAACTTGAATCCGCACTGGAAAGATTTCTTTACCGTTGTCCAGCTCTTACACATCTCTCACCGTTTGATATGCTTATCAAAGAGGGATA
TGCAGTGACTGAAGAGGAAGCGTTGAGTATTGCAGCAGAGCTGTTTCTGAATCCAAATTATTCAATAACTTTGTTAGGTTGTTTCCGCCCATTAGCTCAAAAGATTCTGG
TCAGAGTTGTAGGATTGCTAAGACTTGTGCCCAATTTGAGATCAAACTCAGATATCACAGCTTCCAAAATTCACGAAGAGGACCTGAATGGAGTTGTCAATATAATTTCG
CTTTATGACCAAAGAGGGAGGGGGCTTGATCTTCACGAGCTTGCTTGTCTAGCATTTTGTCGTGCCCTTGATTTGGCCCCCTTTTTATTAGGGTTTGTCACTCAT

mRNA sequence

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Protein sequence

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MAIDGRFKLESALERFLYRCPALTHLSPFDMLIKEGYAVTEEEALSIAAELFLNPNYSITLLGCFRPLAQKILVRVVGLLRLVPNLRSNSDITASKIHEEDLNGVVNIIS
LYDQRGRGLDLHELACLAFCRALDLAPFLLGFVTH

MS009578 (gene) of Bitter gourd (TR) v1 genome