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MS009584 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009584
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein Brevis radix-like 2
Genome locationscaffold813:2504051..2504266
RNA-Seq ExpressionMS009584
SyntenyMS009584
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575453.1 Protein Brevis radix-like 3, partial [Cucurbita argyrosperma subsp. sororia]1.7e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     ++           K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

KAG7013997.1 Protein Brevis radix-like 3 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     ++           K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

XP_022954276.1 protein Brevis radix-like 3 [Cucurbita moschata]1.7e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     ++           K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

XP_022992309.1 protein Brevis radix-like 2 [Cucurbita maxima]1.7e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     ++           K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

XP_023547515.1 protein Brevis radix-like 3 [Cucurbita pepo subsp. pepo]1.7e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     ++           K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

TrEMBL top hitse value%identityAlignment
A0A1S3CGN4 protein Brevis radix-like 21.8e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     +            K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

A0A5D3BWP1 Protein Brevis radix-like 21.8e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     +            K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

A0A6J1DMT8 protein Brevis radix-like 21.1e-0747.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     +            K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

A0A6J1GQL1 protein Brevis radix-like 38.1e-0847.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     ++           K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

A0A6J1JVC6 protein Brevis radix-like 28.1e-0847.22Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        LK  GAY NCKPCSGSS DN+++KY ES       +F     ++           K +  RLKALSSGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

SwissProt top hitse value%identityAlignment
Q5HZ09 Protein Brevis radix-like 31.1e-0439.73Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAW-KGIRVRLKALSSGEGTP
        +K  GAY NCKPCSG++  NQ   Y +S       +F     Q    A  T   W   +  RLK +SS EGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAW-KGIRVRLKALSSGEGTP

Q8GYL9 Protein Brevis radix-like 29.6e-0636.11Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        +K  GAY +CKPCSGSS  N+   Y +S +     +F     +    +       K +  RLK   SGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

Arabidopsis top hitse value%identityAlignment
AT1G54180.1 BREVIS RADIX-like 37.5e-0639.73Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAW-KGIRVRLKALSSGEGTP
        +K  GAY NCKPCSG++  NQ   Y +S       +F     Q    A  T   W   +  RLK +SS EGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAW-KGIRVRLKALSSGEGTP

AT1G54180.2 BREVIS RADIX-like 37.5e-0639.73Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAW-KGIRVRLKALSSGEGTP
        +K  GAY NCKPCSG++  NQ   Y +S       +F     Q    A  T   W   +  RLK +SS EGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAW-KGIRVRLKALSSGEGTP

AT3G14000.1 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein6.8e-0736.11Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        +K  GAY +CKPCSGSS  N+   Y +S +     +F     +    +       K +  RLK   SGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP

AT3G14000.2 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein6.8e-0736.11Show/hide
Query:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP
        +K  GAY +CKPCSGSS  N+   Y +S +     +F     +    +       K +  RLK   SGEGTP
Subjt:  LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAAGCCCATGGGAGCATACGATAACTGCAAGCCATGCTCAGGGTCGTCTATAGATAATCAGCAGTGGAAATATAAAGAGTCTGTTCTAATACCGCCTCAAACTCAGTT
TCTGATGCTCCTATCGCAGGACTGGGAGCATGCTTTTGACACTAACGCGGCGTGGAAAGGAATTAGGGTAAGGCTAAAGGCGTTGTCCAGTGGAGAAGGGACGCCT
mRNA sequenceShow/hide mRNA sequence
TTGAAGCCCATGGGAGCATACGATAACTGCAAGCCATGCTCAGGGTCGTCTATAGATAATCAGCAGTGGAAATATAAAGAGTCTGTTCTAATACCGCCTCAAACTCAGTT
TCTGATGCTCCTATCGCAGGACTGGGAGCATGCTTTTGACACTAACGCGGCGTGGAAAGGAATTAGGGTAAGGCTAAAGGCGTTGTCCAGTGGAGAAGGGACGCCT
Protein sequenceShow/hide protein sequence
LKPMGAYDNCKPCSGSSIDNQQWKYKESVLIPPQTQFLMLLSQDWEHAFDTNAAWKGIRVRLKALSSGEGTP