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MS009607 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009607
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold813:2657655..2657834
RNA-Seq ExpressionMS009607
SyntenyMS009607
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032570.1 protein SAND [Cucumis melo var. makuwa]4.5e-0646.67Show/hide
Query:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        SS RSPW+SI +  R V+ L+ FK+G G+RI FW D W+ S  L   FP + +I   P G
Subjt:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

KAA0043277.1 hypothetical protein E6C27_scaffold110G001660 [Cucumis melo var. makuwa]7.7e-0650.88Show/hide
Query:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        +SPW+SI +T R V++L+ FKLG+G RI FW DLWIG  L    FP +  I   P+G
Subjt:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

TYK00776.1 hypothetical protein E5676_scaffold420G00430 [Cucumis melo var. makuwa]9.1e-0749.12Show/hide
Query:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        +SPW+SI +  R V+ L SFKLG+G+RI FW DLWI    L   +P + +I   PNG
Subjt:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

TYK02778.1 hypothetical protein E5676_scaffold145G00370 [Cucumis melo var. makuwa]7.7e-0648.28Show/hide
Query:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSP
        +S RSPW+SI +  R VDSL+SF LG+G RI FW D WIG+  +   +  + KI   P
Subjt:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSP

TYK06564.1 hypothetical protein E5676_scaffold453G00250 [Cucumis melo var. makuwa]2.4e-0743.33Show/hide
Query:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        +S +SPW+ I    R +++L+SFKLG+GNRI FW D+W+  T   T F  + ++   PNG
Subjt:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

TrEMBL top hitse value%identityAlignment
A0A5A7SP09 Vacuolar fusion protein MON1 homolog2.2e-0646.67Show/hide
Query:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        SS RSPW+SI +  R V+ L+ FK+G G+RI FW D W+ S  L   FP + +I   P G
Subjt:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

A0A5A7TN98 Uncharacterized protein3.7e-0650.88Show/hide
Query:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        +SPW+SI +T R V++L+ FKLG+G RI FW DLWIG  L    FP +  I   P+G
Subjt:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

A0A5D3BR86 Uncharacterized protein4.4e-0749.12Show/hide
Query:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        +SPW+SI +  R V+ L SFKLG+G+RI FW DLWI    L   +P + +I   PNG
Subjt:  RSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

A0A5D3BUW5 Uncharacterized protein3.7e-0648.28Show/hide
Query:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSP
        +S RSPW+SI +  R VDSL+SF LG+G RI FW D WIG+  +   +  + KI   P
Subjt:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSP

A0A5D3C5F2 Uncharacterized protein1.2e-0743.33Show/hide
Query:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG
        +S +SPW+ I    R +++L+SFKLG+GNRI FW D+W+  T   T F  + ++   PNG
Subjt:  SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGCAGTTGTAGAAGTCCTTGGCTGAGCATTAAGCAAACTTCAAGGCTTGTTGATTCCCTTTCTTCATTCAAATTGGGTAGCGGTAATAGAATCAATTTCTGGAAAGATTT
ATGGATTGGTTCCACTCTGTTAATGACTACCTTTCCATCAATCCTCAAGATCATCTCCAGTCCAAACGGT
mRNA sequenceShow/hide mRNA sequence
AGCAGTTGTAGAAGTCCTTGGCTGAGCATTAAGCAAACTTCAAGGCTTGTTGATTCCCTTTCTTCATTCAAATTGGGTAGCGGTAATAGAATCAATTTCTGGAAAGATTT
ATGGATTGGTTCCACTCTGTTAATGACTACCTTTCCATCAATCCTCAAGATCATCTCCAGTCCAAACGGT
Protein sequenceShow/hide protein sequence
SSCRSPWLSIKQTSRLVDSLSSFKLGSGNRINFWKDLWIGSTLLMTTFPSILKIISSPNG