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MS009623 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009623
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAuxin responsive SAUR protein
Genome locationscaffold813:2814741..2815109
RNA-Seq ExpressionMS009623
SyntenyMS009623
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575422.1 Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]4.8e-4781.45Show/hide
Query:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH
        MV+A GTLTKLKSAIKRWPSI KLGRSSSS+SV AV+D  NI E  SKELHTVYVGKSRR Y +S DV+AHPLFQELVDKS++D+D A+VVSCEVVMFEH
Subjt:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH

Query:  LLWMLENAATQLGSMEELVDFYTC
        LLWMLENAATQLGS EELV+FYTC
Subjt:  LLWMLENAATQLGSMEELVDFYTC

KAG7013963.1 hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-4780.65Show/hide
Query:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH
        MV+A GTLTKLKSAIKRWPSI KLGRSSSS+SV AV+D  NI E  SKELHTVYVGKSRR Y +S DV+AHPLFQELVDKS++D+D A++VSCEVVMFEH
Subjt:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH

Query:  LLWMLENAATQLGSMEELVDFYTC
        LLWMLENAATQLGS EELV+FYTC
Subjt:  LLWMLENAATQLGSMEELVDFYTC

XP_022151578.1 uncharacterized protein LOC111019484 [Momordica charantia]1.4e-59100Show/hide
Query:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL
        MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL
Subjt:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL

Query:  LWMLENAATQLGSMEELVDFYTC
        LWMLENAATQLGSMEELVDFYTC
Subjt:  LWMLENAATQLGSMEELVDFYTC

XP_022992444.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]2.6e-4883.87Show/hide
Query:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH
        MV+A GTLTKLKSAIKRWPSI KLGRSSSSVSV AV+D  NI E+ SKELHTVYVGKSRR Y +S DV+AHPLFQELVDKSS+D+DSA+VVSCEVVMFEH
Subjt:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH

Query:  LLWMLENAATQLGSMEELVDFYTC
        LLWMLENAATQLGS EELV+FYTC
Subjt:  LLWMLENAATQLGSMEELVDFYTC

XP_038899152.1 auxin-responsive protein SAUR77 [Benincasa hispida]9.7e-4883.74Show/hide
Query:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL
        MV+AGTLTKLKSAIKRWPSI KLGRSSSSVSV AV+D  NI E+ SKEL TVYVGKSRR Y +S DVVAHPLFQELVDKSS DD+ A+VVSCEVVMFEHL
Subjt:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL

Query:  LWMLENAATQLGSMEELVDFYTC
        LWMLENAATQLGS EELV+FYTC
Subjt:  LWMLENAATQLGSMEELVDFYTC

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ4 Uncharacterized protein1.3e-4580.8Show/hide
Query:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRES-NSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN-DDDSAIVVSCEVVMFE
        MV+AGTLTKLKSAIKRWPSI KLGRSSSSVSV AV+D  N+ E+ NSKEL TVYVGKSRR Y +S DVV HPLFQELVDKSS+ D+D  +VVSCEVVMFE
Subjt:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRES-NSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN-DDDSAIVVSCEVVMFE

Query:  HLLWMLENAATQLGSMEELVDFYTC
        HLLWMLENAATQLGS EELV+FYTC
Subjt:  HLLWMLENAATQLGSMEELVDFYTC

A0A5D3BXT3 Auxin responsive SAUR protein4.9e-4580Show/hide
Query:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRE-SNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN-DDDSAIVVSCEVVMFE
        MV+AGTLTKLKSAIKRWPSI KLGRSSSSVSV AV+D  N+ + +NSKEL TVYVGKSRR Y +S DVV HPLFQELVDKSS+ D+D  +VVSCEVVMFE
Subjt:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRE-SNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN-DDDSAIVVSCEVVMFE

Query:  HLLWMLENAATQLGSMEELVDFYTC
        HLLWMLENAATQLGS EELV+FYTC
Subjt:  HLLWMLENAATQLGSMEELVDFYTC

A0A6J1DCJ5 uncharacterized protein LOC1110194847.0e-60100Show/hide
Query:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL
        MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL
Subjt:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHL

Query:  LWMLENAATQLGSMEELVDFYTC
        LWMLENAATQLGSMEELVDFYTC
Subjt:  LWMLENAATQLGSMEELVDFYTC

A0A6J1GNV0 uncharacterized protein LOC1114561216.8e-4781.45Show/hide
Query:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH
        MV+A GTLTKLKSAIKRWPSI KLGRSSSSVSV AV++  NI E  SKELHTVYVGKSRR Y +S DV+AHPLFQELVDKS +D+D A+VVSCEVVMFEH
Subjt:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH

Query:  LLWMLENAATQLGSMEELVDFYTC
        LLWMLENAATQLGS EELV+FYTC
Subjt:  LLWMLENAATQLGSMEELVDFYTC

A0A6J1JXK2 auxin-responsive protein SAUR50-like1.2e-4883.87Show/hide
Query:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH
        MV+A GTLTKLKSAIKRWPSI KLGRSSSSVSV AV+D  NI E+ SKELHTVYVGKSRR Y +S DV+AHPLFQELVDKSS+D+DSA+VVSCEVVMFEH
Subjt:  MVRA-GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEH

Query:  LLWMLENAATQLGSMEELVDFYTC
        LLWMLENAATQLGS EELV+FYTC
Subjt:  LLWMLENAATQLGSMEELVDFYTC

SwissProt top hitse value%identityAlignment
Q29PU2 Auxin-responsive protein SAUR764.4e-1944.96Show/hide
Query:  MVRAGT-LTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQEL--VDKSSNDDDSAIVVSCEVVMF
        M + G  L KLKS +K+  S     + +   +    + ++ +    S++L TVYVG++RR Y +SSDVV+HPLFQ+L  VD     +D +I VSCEVV+F
Subjt:  MVRAGT-LTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQEL--VDKSSNDDDSAIVVSCEVVMF

Query:  EHLLWMLENA---ATQLGSMEELVDFYTC
        EHLLWMLENA    ++  S+ ELV+FY C
Subjt:  EHLLWMLENA---ATQLGSMEELVDFYTC

Q9C9E1 Auxin-responsive protein SAUR783.7e-2652Show/hide
Query:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN---DDDSAIVVSCEVVMF
        M + G LTKLKSA+K+WPS  K      S S  AV+D      S    LH VYVG++RR Y++  D+++HPLFQELVD+SS+   + D  IVV+CEVV+F
Subjt:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN---DDDSAIVVSCEVVMF

Query:  EHLLWMLENAATQLGSMEELVDFYT
        EHLLWML+ +  + GS+EEL +FYT
Subjt:  EHLLWMLENAATQLGSMEELVDFYT

Q9LQI6 Auxin-responsive protein SAUR772.6e-2750.38Show/hide
Query:  GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSS-----NDDDSAIVVSCEVVMFEH
        G LTKLKSAIK+WPS+ K   S+   +  AV++      S  ++LH VYVGKSRR Y++SS V+AHPLFQEL+D+SS       D   ++V+CEVV+FEH
Subjt:  GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSS-----NDDDSAIVVSCEVVMFEH

Query:  LLWMLENAAT--------QLGSMEELVDFYT
        LLWML+N+++        + GS+EEL +FYT
Subjt:  LLWMLENAAT--------QLGSMEELVDFYT

Arabidopsis top hitse value%identityAlignment
AT1G17345.1 SAUR-like auxin-responsive protein family1.8e-2850.38Show/hide
Query:  GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSS-----NDDDSAIVVSCEVVMFEH
        G LTKLKSAIK+WPS+ K   S+   +  AV++      S  ++LH VYVGKSRR Y++SS V+AHPLFQEL+D+SS       D   ++V+CEVV+FEH
Subjt:  GTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSS-----NDDDSAIVVSCEVVMFEH

Query:  LLWMLENAAT--------QLGSMEELVDFYT
        LLWML+N+++        + GS+EEL +FYT
Subjt:  LLWMLENAAT--------QLGSMEELVDFYT

AT1G72430.1 SAUR-like auxin-responsive protein family2.7e-2752Show/hide
Query:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN---DDDSAIVVSCEVVMF
        M + G LTKLKSA+K+WPS  K      S S  AV+D      S    LH VYVG++RR Y++  D+++HPLFQELVD+SS+   + D  IVV+CEVV+F
Subjt:  MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSN---DDDSAIVVSCEVVMF

Query:  EHLLWMLENAATQLGSMEELVDFYT
        EHLLWML+ +  + GS+EEL +FYT
Subjt:  EHLLWMLENAATQLGSMEELVDFYT

AT3G12955.1 SAUR-like auxin-responsive protein family1.9e-0935.16Show/hide
Query:  KLKSAIKRWPSIG-KLGRSSSSVSVVAVT-------DATNIRESNSKELH-TVYVGKSRRRYLISSDVVAHPLFQELVDK------SSNDDDSAIV-VSC
        +L   ++R  S+  +LGRS S  S+ + +          ++ +S +  ++ TV VG++++ YLIS   + HPL   LV+K        N+D S I+ V C
Subjt:  KLKSAIKRWPSIG-KLGRSSSSVSVVAVT-------DATNIRESNSKELH-TVYVGKSRRRYLISSDVVAHPLFQELVDK------SSNDDDSAIV-VSC

Query:  EVVMFEHLLWMLENAATQLGSMEELVDF
        EVV+F+HLLWMLE    ++  +E L DF
Subjt:  EVVMFEHLLWMLENAATQLGSMEELVDF

AT3G43120.1 SAUR-like auxin-responsive protein family9.8e-0634.72Show/hide
Query:  VYVGKSRRRYLISSDVVAHPLFQELVDKSSN----DDDSAIVVSCEVVMFEHLLWMLENAATQLGSMEELVD
        VYVG   RR++I ++ ++H LF+ L++K+      D   A+ + CEV  F++LL  +EN      S E+ V+
Subjt:  VYVGKSRRRYLISSDVVAHPLFQELVDKSSN----DDDSAIVVSCEVVMFEHLLWMLENAATQLGSMEELVD

AT5G20820.1 SAUR-like auxin-responsive protein family3.1e-2044.96Show/hide
Query:  MVRAGT-LTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQEL--VDKSSNDDDSAIVVSCEVVMF
        M + G  L KLKS +K+  S     + +   +    + ++ +    S++L TVYVG++RR Y +SSDVV+HPLFQ+L  VD     +D +I VSCEVV+F
Subjt:  MVRAGT-LTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQEL--VDKSSNDDDSAIVVSCEVVMF

Query:  EHLLWMLENA---ATQLGSMEELVDFYTC
        EHLLWMLENA    ++  S+ ELV+FY C
Subjt:  EHLLWMLENA---ATQLGSMEELVDFYTC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGAGCCGGAACCCTCACCAAGCTCAAGTCTGCCATTAAAAGATGGCCCTCGATTGGCAAGCTCGGTCGGAGTTCCAGCTCCGTGTCGGTCGTCGCCGTGACCGA
TGCTACCAATATCCGCGAAAGCAACTCGAAGGAGCTTCACACGGTCTATGTTGGCAAGTCACGGCGGCGATATCTTATCAGCTCAGATGTCGTAGCACACCCTCTGTTTC
AGGAGCTGGTTGACAAATCGTCTAACGACGACGACAGCGCGATTGTGGTTTCTTGCGAGGTGGTTATGTTTGAGCATTTGTTGTGGATGTTAGAGAATGCAGCCACGCAA
TTGGGGTCGATGGAGGAGCTCGTCGATTTCTATACTTGC
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGAGCCGGAACCCTCACCAAGCTCAAGTCTGCCATTAAAAGATGGCCCTCGATTGGCAAGCTCGGTCGGAGTTCCAGCTCCGTGTCGGTCGTCGCCGTGACCGA
TGCTACCAATATCCGCGAAAGCAACTCGAAGGAGCTTCACACGGTCTATGTTGGCAAGTCACGGCGGCGATATCTTATCAGCTCAGATGTCGTAGCACACCCTCTGTTTC
AGGAGCTGGTTGACAAATCGTCTAACGACGACGACAGCGCGATTGTGGTTTCTTGCGAGGTGGTTATGTTTGAGCATTTGTTGTGGATGTTAGAGAATGCAGCCACGCAA
TTGGGGTCGATGGAGGAGCTCGTCGATTTCTATACTTGC
Protein sequenceShow/hide protein sequence
MVRAGTLTKLKSAIKRWPSIGKLGRSSSSVSVVAVTDATNIRESNSKELHTVYVGKSRRRYLISSDVVAHPLFQELVDKSSNDDDSAIVVSCEVVMFEHLLWMLENAATQ
LGSMEELVDFYTC