CuGenDBv2

Gene ID	MS009629
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	LEA_2 domain-containing protein
Genome location	scaffold813:2857161..2857976
RNA-Seq Expression	MS009629
Synteny	MS009629
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575419.1 hypothetical protein SDJN03_26058, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-86

79.72

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLAS T+FSN FCC QICT+YTLKRFC+FLLFIA+FS+IA+ IAALPVI LLKPR+PIFSL+SLRLDWYNIS+ S S F+SSVFTLTL SQNPN+I I
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLL+I+DGNA+IGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT E VE+K++GDVGVEL VLHMAV+KMKVALNC+V+V+YR LNF+ E+
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        L NG+ T+ KAL
Subjt:  LDNGSGTIKKAL

XP_022146483.1 uncharacterized protein LOC111015690 isoform X1 [Momordica charantia]

2.7e-106

99.06

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATREL EIKVVGDVGVELLVLHMAVLKMKVALNCDV VNYRELNFRNEV
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        LDNGSGTIKKAL
Subjt:  LDNGSGTIKKAL

XP_022146491.1 uncharacterized protein LOC111015690 isoform X2 [Momordica charantia]

2.7e-106

99.06

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATREL EIKVVGDVGVELLVLHMAVLKMKVALNCDV VNYRELNFRNEV
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        LDNGSGTIKKAL
Subjt:  LDNGSGTIKKAL

XP_022992383.1 uncharacterized protein LOC111488707 isoform X1 [Cucurbita maxima]

8.2e-87

79.72

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLAS T+FSN FCC QICT+YTLKRFC+FLLFIA+FS+IA+ IAALPVI LLKPR+PIFSL+SLRLDWYNIS+ SGS F+SSVFTLTL SQNPN+I I
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLL+I+DGNA+IGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT E VE+K++GD+GVEL VLHMAV+KMKVALNC+V+V+YR LNFR ++
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        L NG+ T+ KAL
Subjt:  LDNGSGTIKKAL

XP_023548218.1 uncharacterized protein LOC111806923 [Cucurbita pepo subsp. pepo]

1.8e-86

79.72

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLAS T+FSN FCC QICT+YTLKRFC+FLLFIA+FS+IA+ IAALPVI LLKPR+PIFSL+SLRLDWYNIS+ S S F+SSVFTLTLNS+NPN+I I
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLL+I+DGNA+IGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT E VE+K++GDVGVEL VLHMAV+KMKVALNC+V+V+YR LNFR ++
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        L NG+ T+ KAL
Subjt:  LDNGSGTIKKAL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CXE3 uncharacterized protein LOC111015690 isoform X3

8.6e-82

83.02

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLD                               
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
           PSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATREL EIKVVGDVGVELLVLHMAVLKMKVALNCDV VNYRELNFRNEV
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        LDNGSGTIKKAL
Subjt:  LDNGSGTIKKAL

A0A6J1CYP8 uncharacterized protein LOC111015690 isoform X1

1.3e-106

99.06

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATREL EIKVVGDVGVELLVLHMAVLKMKVALNCDV VNYRELNFRNEV
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        LDNGSGTIKKAL
Subjt:  LDNGSGTIKKAL

A0A6J1CZI3 uncharacterized protein LOC111015690 isoform X2

1.3e-106

99.06

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATREL EIKVVGDVGVELLVLHMAVLKMKVALNCDV VNYRELNFRNEV
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        LDNGSGTIKKAL
Subjt:  LDNGSGTIKKAL

A0A6J1GP37 uncharacterized protein LOC111456218 isoform X1

2.6e-86

79.25

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLAS T+FS+ FCC QICT+YTLKRFC+FLLFIA+FS+IA+ IAALPVI LLKPR+PIFSL+SLRLDWYNIS+ S S F+SSVFTLTLNS+NPN+I I
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLL+I+DGNA+IGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT E VE+K++GDVGVEL VLHMAV+KMKVALNC+V+V+YR LNFR ++
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        L NG+ T+ KAL
Subjt:  LDNGSGTIKKAL

A0A6J1JZ17 uncharacterized protein LOC111488707 isoform X1

4.0e-87

79.72

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Query:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI
        MDVLAS T+FSN FCC QICT+YTLKRFC+FLLFIA+FS+IA+ IAALPVI LLKPR+PIFSL+SLRLDWYNIS+ SGS F+SSVFTLTL SQNPN+I I
Subjt:  MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAI

Query:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV
        KYSPSRLL+I+DGNA+IGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDAT E VE+K++GD+GVEL VLHMAV+KMKVALNC+V+V+YR LNFR ++
Subjt:  KYSPSRLLVIYDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEV

Query:  LDNGSGTIKKAL
        L NG+ T+ KAL
Subjt:  LDNGSGTIKKAL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

1.3e-10

31.46

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Query:  CIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSG-----SSFVSSVFTLTLNSQNPNRIAIKYSPSRLLVIYDGNAVIGTIRVP
        C+FLLF   F  + VL   L VIL +KP++P F LQ + + +  IS  S      ++ +S    +   + NPN++ I+Y  S   V+Y G   +G   VP
Subjt:  CIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSG-----SSFVSSVFTLTLNSQNPNRIAIKYSPSRLLVIYDGNAVIGTIRVP

Query:  EVFQPARSDDRSVRTRLLLHRFNV------DLF-DAT-RELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRE
          +Q A S  ++V   + + R N+      DL  DA+  + VE+ V GDVG ++ V++     ++V++NC + ++ R+
Subjt:  EVFQPARSDDRSVRTRLLLHRFNV------DLF-DAT-RELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRE

AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

4.9e-05

35.56

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Query:  AVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAIKYSPSRLLVIYDGNAVIGTIRVPEVFQPARS
        A    A   +L  KP++P F L S+ L     S+K     + +   LT++  NPN  AI YS +++ ++YDG  V+G+  V    QPARS
Subjt:  AVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAIKYSPSRLLVIYDGNAVIGTIRVPEVFQPARS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATGTTCTTGCATCTCGAACTCAATTTTCCAATTGCTTTTGCTGCCAACAGATCTGTACGATTTATACTCTGAAACGATTCTGCATTTTTCTTCTCTTCATCGCTAT
CTTTTCAGTTATCGCAGTTCTGATCGCCGCATTGCCTGTAATTCTCCTGTTGAAGCCTCGAGAGCCGATTTTTTCTCTCCAGTCGTTGCGATTGGATTGGTACAACATTA
GCGTCAAATCTGGCTCTTCGTTTGTTTCTTCTGTTTTCACTCTCACTCTCAATTCTCAAAACCCTAACAGAATCGCCATTAAGTACAGTCCGTCGAGGCTCCTCGTGATC
TACGATGGAAACGCCGTGATCGGAACGATTCGAGTCCCTGAAGTTTTCCAGCCGGCTCGCAGCGACGATCGGAGTGTTCGAACTCGTCTGTTGTTGCATCGATTCAATGT
CGATTTGTTCGACGCGACGCGCGAGTTGGTTGAGATCAAAGTTGTTGGCGACGTTGGAGTGGAGCTGCTCGTGCTTCATATGGCCGTGTTGAAGATGAAGGTTGCTCTGA
ATTGCGATGTGAATGTCAATTACAGAGAGCTTAATTTCAGAAATGAAGTACTTGACAATGGATCAGGAACTATAAAAAAAGCTCTG

mRNA sequence

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Protein sequence

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MDVLASRTQFSNCFCCQQICTIYTLKRFCIFLLFIAIFSVIAVLIAALPVILLLKPREPIFSLQSLRLDWYNISVKSGSSFVSSVFTLTLNSQNPNRIAIKYSPSRLLVI
YDGNAVIGTIRVPEVFQPARSDDRSVRTRLLLHRFNVDLFDATRELVEIKVVGDVGVELLVLHMAVLKMKVALNCDVNVNYRELNFRNEVLDNGSGTIKKAL

MS009629 (gene) of Bitter gourd (TR) v1 genome