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MS009634 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009634
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLate embryogenesis abundant protein
Genome locationscaffold813:2897655..2897897
RNA-Seq ExpressionMS009634
SyntenyMS009634
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY25450.1 Senescence-associated gene 21, putative [Theobroma cacao]6.1e-1461.54Show/hide
Query:  RMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK
        R S +VAAE +K Q  AS++         T  R +V A EQKETFWM+DPK+GNWIPE+HFGDIDVAELREKFLSK++
Subjt:  RMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK

KAA0059359.1 putative Senescence-associated protein 21 [Cucumis melo var. makuwa]1.5e-2073.08Show/hide
Query:  MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRKL
        MSSS+A+EQLKAQT ASMV RKVKAA+ET   D+   VEQK+TFWMKDPKSGNWIPE+HF +IDV ELREK L+K K+
Subjt:  MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRKL

KAE8646489.1 hypothetical protein Csa_015817 [Cucumis sativus]5.1e-2175.32Show/hide
Query:  MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK
        MSSSVA+EQLKAQT ASMV RKVKAA+ETG  D+   VEQK+TFWMKDPKSGNWIPE+HF ++DV ELREK L+K K
Subjt:  MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK

KAG6575415.1 hypothetical protein SDJN03_26054, partial [Cucurbita argyrosperma subsp. sororia]7.4e-2067.09Show/hide
Query:  RRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK
        RR+SS VA+EQLKA+  A M  + V A +ET   DD+ AVEQK  FWMKDPKSGNWIPE+HFG+IDV ELREK LSK K
Subjt:  RRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK

XP_022715365.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Durio zibethinus]3.6e-1460Show/hide
Query:  SSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKR
        S +VAAE++K  T AS++ ++     E      V+A EQKETFWM+DPK+GNWIPE+HFGDIDVAELREK LSK+
Subjt:  SSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKR

TrEMBL top hitse value%identityAlignment
A0A061G6G1 Senescence-associated gene 21, putative2.9e-1461.54Show/hide
Query:  RMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK
        R S +VAAE +K Q  AS++         T  R +V A EQKETFWM+DPK+GNWIPE+HFGDIDVAELREKFLSK++
Subjt:  RMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK

A0A061GBY1 Senescence-associated gene 21, putative3.8e-1461.54Show/hide
Query:  RMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK
        R S +VAAE +K Q  AS+          T  R +V A EQKETFWM+DPK+GNWIPE+HFGDIDVAELREKFLSK++
Subjt:  RMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK

A0A0A0K7L4 Uncharacterized protein1.7e-2275.95Show/hide
Query:  RRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK
        RRMSSSVA+EQLKAQT ASMV RKVKAA+ETG  D+   VEQK+TFWMKDPKSGNWIPE+HF ++DV ELREK L+K K
Subjt:  RRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRK

A0A5D3BWU2 Putative Senescence-associated protein 217.2e-2173.08Show/hide
Query:  MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRKL
        MSSS+A+EQLKAQT ASMV RKVKAA+ET   D+   VEQK+TFWMKDPKSGNWIPE+HF +IDV ELREK L+K K+
Subjt:  MSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRKL

A0A6P5WGX9 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like1.7e-1460Show/hide
Query:  SSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKR
        S +VAAE++K  T AS++ ++     E      V+A EQKETFWM+DPK+GNWIPE+HFGDIDVAELREK LSK+
Subjt:  SSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCGAATGAGCTCTTCGGTTGCAGCCGAGCAACTTAAAGCACAAACACCTGCATCAATGGTGGCGAGGAAGGTGAAGGCTGCCATGGAAACAGGGGATCGGGATGATGT
TACTGCAGTAGAACAGAAAGAGACGTTTTGGATGAAAGATCCCAAGAGTGGAAACTGGATTCCGGAGAGCCACTTTGGAGATATTGATGTGGCAGAATTGAGGGAGAAAT
TCCTGTCTAAAAGAAAGCTATCA
mRNA sequenceShow/hide mRNA sequence
AGGCGAATGAGCTCTTCGGTTGCAGCCGAGCAACTTAAAGCACAAACACCTGCATCAATGGTGGCGAGGAAGGTGAAGGCTGCCATGGAAACAGGGGATCGGGATGATGT
TACTGCAGTAGAACAGAAAGAGACGTTTTGGATGAAAGATCCCAAGAGTGGAAACTGGATTCCGGAGAGCCACTTTGGAGATATTGATGTGGCAGAATTGAGGGAGAAAT
TCCTGTCTAAAAGAAAGCTATCA
Protein sequenceShow/hide protein sequence
RRMSSSVAAEQLKAQTPASMVARKVKAAMETGDRDDVTAVEQKETFWMKDPKSGNWIPESHFGDIDVAELREKFLSKRKLS