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MS009648 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009648
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP synthase subunit epsilon, mitochondrial
Genome locationscaffold813:2985268..2985483
RNA-Seq ExpressionMS009648
SyntenyMS009648
Gene Ontology termsGO:0042776 - mitochondrial ATP synthesis coupled proton transport (biological process)
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR006721 - ATP synthase, F1 complex, epsilon subunit, mitochondrial
IPR036742 - ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8709934.1 ATP synthase subunit epsilon [Hibiscus syriacus]2.5e-2784.29Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLLF
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK E L+REKVHFSISKW DGKP+KPSM+  ++ F
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLLF

MBA0619645.1 hypothetical protein [Gossypium davidsonii]1.9e-2791.04Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK E LSREKVHFSISKW DGKP+KPSMF  S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS

MBA0655004.1 hypothetical protein [Gossypium klotzschianum]1.9e-2791.04Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK E LSREKVHFSISKW DGKP+KPSMF  S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS

XP_021897296.1 ATP synthase subunit epsilon, mitochondrial [Carica papaya]2.5e-2784.72Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLLFRI
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK+E L+REKVHFS+SKWADGKPQKPS+ S    F I
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLLFRI

XP_022147265.1 ATP synthase subunit epsilon, mitochondrial [Momordica charantia]8.6e-2895.38Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKP++ S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS

TrEMBL top hitse value%identityAlignment
A0A6A3AYS3 ATP synthase subunit epsilon1.2e-2784.29Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLLF
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK E L+REKVHFSISKW DGKP+KPSM+  ++ F
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLLF

A0A6J1CZN8 ATP synthase subunit epsilon, mitochondrial4.1e-2895.38Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKP++ S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS

A0A7J8S133 Uncharacterized protein9.2e-2891.04Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK E LSREKVHFSISKW DGKP+KPSMF  S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS

A0A7J8UXQ1 Uncharacterized protein9.2e-2891.04Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK E LSREKVHFSISKW DGKP+KPSMF  S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLS

A0A7J9E938 Uncharacterized protein4.6e-2791.18Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSM-FSLS
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK E LSREKVHFSISKW DGKP+KPSM FS S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSM-FSLS

SwissProt top hitse value%identityAlignment
Q06450 ATP synthase subunit epsilon, mitochondrial2.3e-2886.15Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS
        MASNAAVPFWRAAGMTYITYSN+CAN+VRNCLKEPY+AE LSREKVHFS SKW DGKPQKP++ S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS

Q41898 ATP synthase subunit epsilon, mitochondrial1.7e-2379.03Show/hide
Query:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSM
        A+ AAVPFWRAAGMTYI YSNICA LVRNCLKEP+K+E  SREKVHFSISKW DGK +KP++
Subjt:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSM

Q75JK6 ATP synthase subunit epsilon, mitochondrial2.7e-0842.62Show/hide
Query:  FWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLL
        +WRAAG+TY+ Y+NIC   VRNCLKEP++A   +RE    +   + +GK     + +  LL
Subjt:  FWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLL

Q96253 ATP synthase subunit epsilon, mitochondrial5.2e-2886.15Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLKEP+KAE L+REKVHFS+SKWADGKPQKP + S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS

Q9VXN2 Protein stunted7.8e-0848.98Show/hide
Query:  WRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKP
        WRAAG+TYI YSNI A ++R  LK   +A+   R+  H   + WA+GKP
Subjt:  WRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKP

Arabidopsis top hitse value%identityAlignment
AT1G51650.1 ATP synthase epsilon chain, mitochondrial3.7e-2986.15Show/hide
Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLKEP+KAE L+REKVHFS+SKWADGKPQKP + S
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGAACGCAGCGGTGCCCTTTTGGAGAGCGGCGGGGATGACATACATCACGTACTCAAACATATGCGCCAATCTGGTCAGGAACTGTCTCAAGGAGCCTTACAA
GGCCGAAGTTCTCAGCCGCGAGAAGGTTCACTTTTCAATTTCCAAGTGGGCGGACGGCAAGCCCCAGAAGCCCAGTATGTTCTCTCTCTCGCTCCTATTTAGAATT
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGAACGCAGCGGTGCCCTTTTGGAGAGCGGCGGGGATGACATACATCACGTACTCAAACATATGCGCCAATCTGGTCAGGAACTGTCTCAAGGAGCCTTACAA
GGCCGAAGTTCTCAGCCGCGAGAAGGTTCACTTTTCAATTTCCAAGTGGGCGGACGGCAAGCCCCAGAAGCCCAGTATGTTCTCTCTCTCGCTCCTATTTAGAATT
Protein sequenceShow/hide protein sequence
MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKAEVLSREKVHFSISKWADGKPQKPSMFSLSLLFRI