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MS009674 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS009674
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR71-like
Genome locationscaffold813:3161782..3162216
RNA-Seq ExpressionMS009674
SyntenyMS009674
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45404.1 hypothetical protein Csa_015702 [Cucumis sativus]3.3e-3960.78Show/hide
Query:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL
        PKKSNKIR+IV+LQQI+KKWKRLAN     SS    SN  ++K      +DGVPKGYLAVCVGKE+KRFVIPTH+LTH AFR LL+EAEEEFGFHQQGVL
Subjt:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL

Query:  QIPCEVPVFENILDGLQCDHQDFF---------FHNHADCDLT-----PQMCT
        QIPC V VFE+IL+ +Q  + + F         F    +CDLT     PQ+CT
Subjt:  QIPCEVPVFENILDGLQCDHQDFF---------FHNHADCDLT-----PQMCT

XP_004141833.2 auxin-responsive protein SAUR40 [Cucumis sativus]3.3e-3960.78Show/hide
Query:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL
        PKKSNKIR+IV+LQQI+KKWKRLAN     SS    SN  ++K      +DGVPKGYLAVCVGKE+KRFVIPTH+LTH AFR LL+EAEEEFGFHQQGVL
Subjt:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL

Query:  QIPCEVPVFENILDGLQCDHQDFF---------FHNHADCDLT-----PQMCT
        QIPC V VFE+IL+ +Q  + + F         F    +CDLT     PQ+CT
Subjt:  QIPCEVPVFENILDGLQCDHQDFF---------FHNHADCDLT-----PQMCT

XP_008462190.1 PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo]4.4e-3960.78Show/hide
Query:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL
        PKKSNKIR+IV+LQQI+KKWKRLAN     SS    SN  ++K      +DGVPKGYLAVCVGKE+KRFVIPTH+LTH AFR LL+EAEEEFGFHQQGVL
Subjt:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL

Query:  QIPCEVPVFENILDGLQCDHQDFFFHN---------HADCDLT-----PQMCT
        QIPC V VFE+IL+ +Q  + + F  +           DCDLT     PQ+CT
Subjt:  QIPCEVPVFENILDGLQCDHQDFFFHN---------HADCDLT-----PQMCT

XP_022155187.1 auxin-responsive protein SAUR71-like [Momordica charantia]3.4e-7699.29Show/hide
Query:  MDPKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQG
        MDPKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQG
Subjt:  MDPKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQG

Query:  VLQIPCEVPVFENILDGLQCDHQDFFFHNHADCDLTPQMCT
        VLQIPCE+PVFENILDGLQCDHQDFFFHNHADCDLTPQMCT
Subjt:  VLQIPCEVPVFENILDGLQCDHQDFFFHNHADCDLTPQMCT

XP_038899517.1 auxin-responsive protein SAUR71-like [Benincasa hispida]2.4e-3758.82Show/hide
Query:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL
        PKKSNKIR+IVRLQQI+KKWKRLAN     S+++      ++K      +D VPKGYLAVCVGKELKRFVIPTH+LTH AFR LL+EAEEEFGFHQQGVL
Subjt:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL

Query:  QIPCEVPVFENILDGLQ---------CDHQDFFFHNHADCDLT-----PQMCT
        QIPC V VFE+IL+ +Q          D++   F    DC+LT     P++CT
Subjt:  QIPCEVPVFENILDGLQ---------CDHQDFFFHNHADCDLT-----PQMCT

TrEMBL top hitse value%identityAlignment
A0A0A0K973 Uncharacterized protein1.6e-3960.78Show/hide
Query:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL
        PKKSNKIR+IV+LQQI+KKWKRLAN     SS    SN  ++K      +DGVPKGYLAVCVGKE+KRFVIPTH+LTH AFR LL+EAEEEFGFHQQGVL
Subjt:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL

Query:  QIPCEVPVFENILDGLQCDHQDFF---------FHNHADCDLT-----PQMCT
        QIPC V VFE+IL+ +Q  + + F         F    +CDLT     PQ+CT
Subjt:  QIPCEVPVFENILDGLQCDHQDFF---------FHNHADCDLT-----PQMCT

A0A1S3CHW6 auxin-responsive protein SAUR71-like2.1e-3960.78Show/hide
Query:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL
        PKKSNKIR+IV+LQQI+KKWKRLAN     SS    SN  ++K      +DGVPKGYLAVCVGKE+KRFVIPTH+LTH AFR LL+EAEEEFGFHQQGVL
Subjt:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL

Query:  QIPCEVPVFENILDGLQCDHQDFFFHN---------HADCDLT-----PQMCT
        QIPC V VFE+IL+ +Q  + + F  +           DCDLT     PQ+CT
Subjt:  QIPCEVPVFENILDGLQCDHQDFFFHN---------HADCDLT-----PQMCT

A0A5A7UVZ8 Auxin-responsive protein SAUR71-like2.1e-3960.78Show/hide
Query:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL
        PKKSNKIR+IV+LQQI+KKWKRLAN     SS    SN  ++K      +DGVPKGYLAVCVGKE+KRFVIPTH+LTH AFR LL+EAEEEFGFHQQGVL
Subjt:  PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVL

Query:  QIPCEVPVFENILDGLQCDHQDFFFHN---------HADCDLT-----PQMCT
        QIPC V VFE+IL+ +Q  + + F  +           DCDLT     PQ+CT
Subjt:  QIPCEVPVFENILDGLQCDHQDFFFHN---------HADCDLT-----PQMCT

A0A6J1DNN8 auxin-responsive protein SAUR71-like1.7e-7699.29Show/hide
Query:  MDPKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQG
        MDPKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQG
Subjt:  MDPKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQG

Query:  VLQIPCEVPVFENILDGLQCDHQDFFFHNHADCDLTPQMCT
        VLQIPCE+PVFENILDGLQCDHQDFFFHNHADCDLTPQMCT
Subjt:  VLQIPCEVPVFENILDGLQCDHQDFFFHNHADCDLTPQMCT

A0A6J1JXB0 auxin-responsive protein SAUR50-like4.4e-3767.69Show/hide
Query:  PMD-PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNS---SDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFG
        PMD  KKSNKIRDIVRLQQILKKWKRLAN          +   G  K LKT+    ++ VPKGYLAVCVG+ELKRFVIPTH+LTH AFR LLREAEEEFG
Subjt:  PMD-PKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNS---SDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFG

Query:  FHQQGVLQIPCEVPVFENILDGLQCDHQDF
        FHQQGVLQIPC V VF++IL+ +Q +H  F
Subjt:  FHQQGVLQIPCEVPVFENILDGLQCDHQDF

SwissProt top hitse value%identityAlignment
P33081 Auxin-induced protein 15A3.3e-1354.41Show/hide
Query:  KTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGF-HQQGVLQIPCEVPVFENI
        K + +   PKGYLAV VG++LKRFVIP  +L  P+F+ LL +AEEEFG+ H  G L IPC   VF+ I
Subjt:  KTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGF-HQQGVLQIPCEVPVFENI

P33082 Auxin-induced protein X154.3e-1351.47Show/hide
Query:  KTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGF-HQQGVLQIPCEVPVFENI
        K +++   PKGYLAV VG+++KRFVIP  ++  P+F+ LL +AEEEFG+ H  G L IPC   VF+ I
Subjt:  KTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGF-HQQGVLQIPCEVPVFENI

P33083 Auxin-induced protein 6B3.6e-1255.74Show/hide
Query:  VPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQ-QGVLQIPCEVPVFENI
        V KGYLAV VG++++RFVIP  +L  P+F+ LL +AEEEFG+H   G L IPC   VF++I
Subjt:  VPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQ-QGVLQIPCEVPVFENI

Q9LTV3 Auxin-responsive protein SAUR724.3e-1334.21Show/hide
Query:  LQQILKKWKRLANAN-----APKSSRATNSNKGIIKFLKTNSS----DGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVLQIP
        ++Q++++  R+A++         S R +  ++  ++   T  S      VP+G++ V VG E++RFV+    L HP F  LL  + +E+G+ Q+GVLQIP
Subjt:  LQQILKKWKRLANAN-----APKSSRATNSNKGIIKFLKTNSS----DGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVLQIP

Query:  CEVPVFENILDGLQ
        C V VFE I++ L+
Subjt:  CEVPVFENILDGLQ

Q9SGU2 Auxin-responsive protein SAUR711.3e-1439.05Show/hide
Query:  LQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVLQIPCEVPVFENI
        ++Q++++  R+A++      R + S +G  K  K      VP+G++ V VG E++RFV+    L HP F  LL+++ +E+G+ QQGVL+IPC V VFE I
Subjt:  LQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVLQIPCEVPVFENI

Query:  LDGLQ
        L+ L+
Subjt:  LDGLQ

Arabidopsis top hitse value%identityAlignment
AT2G24400.1 SAUR-like auxin-responsive protein family1.0e-3058.87Show/hide
Query:  MDPKKSNKIRDIVRLQQILKKWKR--LANANAPKSSRATNSNKG---IIKFLKTNSS----DGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAE
        M+ KKSNKIR+IV+LQQ+LKKW++  +A+  A  ++   NS+ G    IKFLK   S      VPKGYLAV VG E KR+ IPT +L+H AF  LLREAE
Subjt:  MDPKKSNKIRDIVRLQQILKKWKR--LANANAPKSSRATNSNKG---IIKFLKTNSS----DGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAE

Query:  EEFGFHQQGVLQIPCEVPVFENIL
        EEFGF Q GVL+IPCEV VFE+IL
Subjt:  EEFGFHQQGVLQIPCEVPVFENIL

AT3G43120.1 SAUR-like auxin-responsive protein family3.1e-1939.72Show/hide
Query:  KSNKIRDIVRLQQILKKWKRLA-NANAPKSSRATNSNKGIIK--------FLKTNSSD------------GVPKGYLAVCVGKELKRFVIPTHFLTHPAF
        K   I+ IVRL++IL+KW+ +   + +         +  II          LKT  SD             VPKGYLAV VG EL+RF+IPT+FL+H  F
Subjt:  KSNKIRDIVRLQQILKKWKRLA-NANAPKSSRATNSNKGIIK--------FLKTNSSD------------GVPKGYLAVCVGKELKRFVIPTHFLTHPAF

Query:  RTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQD
        + LL +AEEE+GF   G L IPCEV  F+ +L  ++   +D
Subjt:  RTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQD

AT4G31320.1 SAUR-like auxin-responsive protein family1.2e-3149.09Show/hide
Query:  MDPKKSNKIRDIVRLQQILKKWKRLAN----ANAPKSSRATNSNKGI-----------------IKFLKTNSS----DGVPKGYLAVCVGKELKRFVIPT
        M+ KKSNKIR+IV+LQQILKKW+++A+    AN  K     +SN  I                 IKFLK   S      +PKGYLAV VGKE KR+ IPT
Subjt:  MDPKKSNKIRDIVRLQQILKKWKRLAN----ANAPKSSRATNSNKGI-----------------IKFLKTNSS----DGVPKGYLAVCVGKELKRFVIPT

Query:  HFLTHPAFRTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQDFFFHNHADCDLTPQMC
         +L+H AF  LLREAEEEFGF Q G+L+IPCEV VFE+IL  ++         N +D  LT Q C
Subjt:  HFLTHPAFRTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQDFFFHNHADCDLTPQMC

AT5G20810.1 SAUR-like auxin-responsive protein family9.1e-1938.67Show/hide
Query:  KSNKIRDIVRLQQILKKWKR-----------LANANAPKSSRATNSNKGIIKFLKTNSSD-----------GVPKGYLAVCVGKELKRFVIPTHFLTHPA
        K   IR IVRL++IL+KW+            LA      +  +   NK ++  +K   SD            VPKG LAV VG EL+RF+IPT +L+H  
Subjt:  KSNKIRDIVRLQQILKKWKR-----------LANANAPKSSRATNSNKGIIKFLKTNSSD-----------GVPKGYLAVCVGKELKRFVIPTHFLTHPA

Query:  FRTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQDFFFHNHAD
        F+ LL +AEEEFGF Q G L IPCEV  F+ +L  ++ + +D    +++D
Subjt:  FRTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQDFFFHNHAD

AT5G20810.2 SAUR-like auxin-responsive protein family1.6e-1840.14Show/hide
Query:  KSNKIRDIVRLQQILKKWKR-----------LANANAPKSSRATNSNKGIIKFLKTNSSD-----------GVPKGYLAVCVGKELKRFVIPTHFLTHPA
        K   IR IVRL++IL+KW+            LA      +  +   NK ++  +K   SD            VPKG LAV VG EL+RF+IPT +L+H  
Subjt:  KSNKIRDIVRLQQILKKWKR-----------LANANAPKSSRATNSNKGIIKFLKTNSSD-----------GVPKGYLAVCVGKELKRFVIPTHFLTHPA

Query:  FRTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQD
        F+ LL +AEEEFGF Q G L IPCEV  F+ +L  ++ + +D
Subjt:  FRTLLREAEEEFGFHQQGVLQIPCEVPVFENILDGLQCDHQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATCGACTCCCATGGATCCAAAGAAGTCAAACAAAATCAGAGACATTGTAAGGCTCCAACAAATCCTCAAGAAGTGGAAAAGGCTAGCAAATGCAAATGCTCCAAAGAG
CAGCAGAGCCACTAACAGCAACAAAGGCATCATCAAGTTCTTAAAGACTAATTCTAGTGATGGTGTTCCAAAAGGGTATTTGGCAGTGTGTGTGGGAAAAGAGCTGAAGA
GATTTGTAATCCCCACCCATTTCCTCACCCACCCAGCATTTCGAACATTGCTTAGGGAAGCAGAAGAAGAATTTGGTTTTCACCAACAGGGTGTGCTTCAGATTCCATGT
GAGGTCCCTGTGTTTGAGAATATCTTGGATGGCCTACAATGTGACCACCAAGATTTCTTTTTTCATAATCATGCTGATTGCGACCTCACTCCTCAAATGTGTACA
mRNA sequenceShow/hide mRNA sequence
GAATCGACTCCCATGGATCCAAAGAAGTCAAACAAAATCAGAGACATTGTAAGGCTCCAACAAATCCTCAAGAAGTGGAAAAGGCTAGCAAATGCAAATGCTCCAAAGAG
CAGCAGAGCCACTAACAGCAACAAAGGCATCATCAAGTTCTTAAAGACTAATTCTAGTGATGGTGTTCCAAAAGGGTATTTGGCAGTGTGTGTGGGAAAAGAGCTGAAGA
GATTTGTAATCCCCACCCATTTCCTCACCCACCCAGCATTTCGAACATTGCTTAGGGAAGCAGAAGAAGAATTTGGTTTTCACCAACAGGGTGTGCTTCAGATTCCATGT
GAGGTCCCTGTGTTTGAGAATATCTTGGATGGCCTACAATGTGACCACCAAGATTTCTTTTTTCATAATCATGCTGATTGCGACCTCACTCCTCAAATGTGTACA
Protein sequenceShow/hide protein sequence
ESTPMDPKKSNKIRDIVRLQQILKKWKRLANANAPKSSRATNSNKGIIKFLKTNSSDGVPKGYLAVCVGKELKRFVIPTHFLTHPAFRTLLREAEEEFGFHQQGVLQIPC
EVPVFENILDGLQCDHQDFFFHNHADCDLTPQMCT